RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W TY4B-JP47024 1803 aa10.54□□□□□ -0.72
SHC1YER096W PPH3P32345 308 aa10.53□□□□□ -0.72
SHC1YER096W THI12P42883 340 aa10.53□□□□□ -0.72
SHC1YER096W THI5P43534 340 aa10.53□□□□□ -0.72
SHC1YER096W THI11P47183 340 aa10.53□□□□□ -0.72
SHC1YER096W RCM1P53972 490 aa10.53□□□□□ -0.72
SHC1YER096W THI13Q07748 340 aa10.53□□□□□ -0.72
SHC1YER096W SPT7P35177 1332 aa10.53□□□□□ -0.72
SHC1YER096W NST1P53935 1240 aa10.52□□□□□ -0.73
SHC1YER096W PSK1P31374 1356 aa10.5□□□□□ -0.73
SHC1YER096W CHZ1P40019 153 aaPredicted RBP10.49□□□□□ -0.73
SHC1YER096W PDS5Q04264 1277 aa10.49□□□□□ -0.73
SHC1YER096W NAP1P25293 417 aaKnown RBP10.48□□□□□ -0.73
SHC1YER096W PSD2P53037 1138 aaKnown RBP10.48□□□□□ -0.73
SHC1YER096W YMR196WQ04336 1088 aa10.48□□□□□ -0.73
SHC1YER096W CPS1P27614 576 aa10.47□□□□□ -0.73
SHC1YER096W RTG3P38165 486 aa10.46□□□□□ -0.74
SHC1YER096W HAA1Q12753 694 aaKnown RBP10.46□□□□□ -0.74
SHC1YER096W YIL177CP40434 1758 aa10.46□□□□□ -0.74
SHC1YER096W YJL225CP40889 1758 aa10.46□□□□□ -0.74
SHC1YER096W FKH1P40466 484 aa10.45□□□□□ -0.74
SHC1YER096W YFR006WP43590 535 aa10.45□□□□□ -0.74
SHC1YER096W SEC3P33332 1336 aaKnown RBP10.45□□□□□ -0.74
SHC1YER096W AAD16Q02895 342 aa10.44□□□□□ -0.74
SHC1YER096W LEU3P08638 886 aa10.43□□□□□ -0.74
SHC1YER096W RRP5Q05022 1729 aaKnown RBP10.4□□□□□ -0.74
SHC1YER096W ADE6P38972 1358 aaKnown RBP10.4□□□□□ -0.75
SHC1YER096W YEF3P16521 1044 aaKnown RBP10.37□□□□□ -0.75
SHC1YER096W NSR1P27476 414 aaKnown RBP RIP-Chip data10.37□□□□□ -0.75not detected
SHC1YER096W YRF1-2P40105 1681 aa10.36□□□□□ -0.75
SHC1YER096W AUS1Q08409 1394 aa10.33□□□□□ -0.76
SHC1YER096W SCT1P32784 759 aa10.33□□□□□ -0.76
SHC1YER096W TRK1P12685 1235 aa10.33□□□□□ -0.76
SHC1YER096W SNF2P22082 1703 aa10.32□□□□□ -0.76
SHC1YER096W URB1P34241 1764 aaKnown RBP10.32□□□□□ -0.76
SHC1YER096W LEU2P04173 364 aaPredicted RBP10.32□□□□□ -0.76
SHC1YER096W PTP3P40048 928 aa10.31□□□□□ -0.76
SHC1YER096W ENP1P38333 483 aaKnown RBP10.3□□□□□ -0.76
SHC1YER096W MTR4P47047 1073 aaKnown RBP10.3□□□□□ -0.76
SHC1YER096W FKS3Q04952 1785 aa10.29□□□□□ -0.76
SHC1YER096W RPS24AP0CX31 135 aaKnown RBP10.29□□□□□ -0.76
SHC1YER096W RPS24BP0CX32 135 aaKnown RBP10.29□□□□□ -0.76
SHC1YER096W PRP43P53131 767 aaKnown RBP10.28□□□□□ -0.76
SHC1YER096W PRI1P10363 409 aa10.27□□□□□ -0.77
SHC1YER096W CSE4P36012 229 aa10.27□□□□□ -0.77
SHC1YER096W HIM1Q06674 414 aa10.26□□□□□ -0.77
SHC1YER096W APC1P53886 1748 aa10.24□□□□□ -0.77
SHC1YER096W PDI1P17967 522 aaKnown RBP10.23□□□□□ -0.77
SHC1YER096W TAP42Q04372 366 aa10.23□□□□□ -0.77
SHC1YER096W RRP46P53256 223 aaPredicted RBP10.22□□□□□ -0.77
SHC1YER096W GAS4Q08271 471 aa10.21□□□□□ -0.78
SHC1YER096W DPS1P04802 557 aaKnown RBP10.19□□□□□ -0.78
SHC1YER096W REB1P21538 810 aa10.19□□□□□ -0.78
SHC1YER096W PRP45P28004 379 aaPredicted RBP10.19□□□□□ -0.78
SHC1YER096W KAR2P16474 682 aaKnown RBP10.18□□□□□ -0.78
SHC1YER096W PRP5P21372 849 aaPredicted RBP10.18□□□□□ -0.78
SHC1YER096W MSB3P48566 633 aaPredicted RBP10.18□□□□□ -0.78
SHC1YER096W YRF1-3P0CX14 1859 aa10.18□□□□□ -0.78
SHC1YER096W YRF1-7P0CX15 1859 aa10.18□□□□□ -0.78
SHC1YER096W YRF1-6P53819 1859 aa10.18□□□□□ -0.78
SHC1YER096W PRS1P32895 427 aaKnown RBP10.17□□□□□ -0.78
SHC1YER096W RTF1P53064 558 aa10.17□□□□□ -0.78
SHC1YER096W GRX4P32642 244 aa10.16□□□□□ -0.78
SHC1YER096W APP1P53933 587 aa10.16□□□□□ -0.78
SHC1YER096W RPO41P13433 1351 aaKnown RBP10.14□□□□□ -0.79
SHC1YER096W SLM3Q12093 417 aa10.13□□□□□ -0.79
SHC1YER096W YRF1-4O13559 1382 aa10.12□□□□□ -0.79
SHC1YER096W ENT1Q12518 454 aa10.12□□□□□ -0.79
SHC1YER096W IOC4Q04213 475 aa10.12□□□□□ -0.79
SHC1YER096W MPP10P47083 593 aaKnown RBP10.11□□□□□ -0.79
SHC1YER096W BUB1P41695 1021 aaKnown RBP RIP-Chip data10.1□□□□□ -0.79not detected
SHC1YER096W PAP2P53632 584 aaKnown RBP10.1□□□□□ -0.79
SHC1YER096W YDL144CQ07589 356 aa10.1□□□□□ -0.79
SHC1YER096W YAH1Q12184 172 aaKnown RBP10.1□□□□□ -0.79
SHC1YER096W ENV9Q08651 330 aa10.09□□□□□ -0.79
SHC1YER096W RSF2P46974 1380 aa10.09□□□□□ -0.79
SHC1YER096W RTR1P40084 226 aaPredicted RBP10.08□□□□□ -0.8
SHC1YER096W XKS1P42826 600 aa10.07□□□□□ -0.8
SHC1YER096W THI22Q06490 572 aa10.06□□□□□ -0.8
SHC1YER096W TCB1Q12466 1186 aa10.06□□□□□ -0.8
SHC1YER096W PRD1P25375 712 aa10.05□□□□□ -0.8
SHC1YER096W SUI2P20459 304 aaKnown RBP10.04□□□□□ -0.8
SHC1YER096W AKL1P38080 1108 aaKnown RBP10.04□□□□□ -0.8
SHC1YER096W SIR4P11978 1358 aa10.03□□□□□ -0.8
SHC1YER096W RPP0P05317 312 aaKnown RBP10.02□□□□□ -0.8
SHC1YER096W DSD1P53095 428 aa10.02□□□□□ -0.8
SHC1YER096W RCR1P38212 213 aa10.02□□□□□ -0.81
SHC1YER096W VPS27P40343 622 aaKnown RBP10.02□□□□□ -0.81
SHC1YER096W HEF3P53978 1044 aaKnown RBP10.02□□□□□ -0.81
SHC1YER096W SAP155P43612 1002 aa10.01□□□□□ -0.81
SHC1YER096W RTT109Q07794 436 aa10.01□□□□□ -0.81
SHC1YER096W RVB2Q12464 471 aaKnown RBP10.01□□□□□ -0.81
SHC1YER096W RIM15P43565 1770 aa10.01□□□□□ -0.81
SHC1YER096W IES2P40154 320 aa10□□□□□ -0.81
SHC1YER096W IMH1Q06704 911 aaKnown RBP10□□□□□ -0.81
SHC1YER096W FUN12P39730 1002 aaKnown RBP9.99□□□□□ -0.81
SHC1YER096W CDC45Q08032 650 aa9.99□□□□□ -0.81
SHC1YER096W TPD3P31383 635 aa9.98□□□□□ -0.81
SHC1YER096W HSP104P31539 908 aaKnown RBP9.97□□□□□ -0.81
SHC1YER096W NTH2P35172 780 aa9.97□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms