RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA8, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA8YEL051W TEA1P47988 759 aa6.55□□□□□ -1.36
VMA8YEL051W YNR021WP53723 404 aaKnown RBP6.54□□□□□ -1.36
VMA8YEL051W TY1A-DR4O74302 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-HP0C2I4 478 aaKnown RBP6.52□□□□□ -1.37
VMA8YEL051W TY1A-AP0CX57 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-PR1P0CX58 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-ORP0CX59 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-PR2P0CX60 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-DR5P0CX65 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-ER2P0CX66 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-GR3P0CX67 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-LR1P0CX68 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-MR2P0CX69 440 aa6.52□□□□□ -1.37
VMA8YEL051W SEC2P17065 759 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-JR2P47099 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-DR1Q03856 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-ML1Q04706 440 aaKnown RBP6.52□□□□□ -1.37
VMA8YEL051W TY1A-BRQ12217 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-NL2Q12470 440 aa6.52□□□□□ -1.37
VMA8YEL051W TY1A-GR2Q12485 440 aa6.52□□□□□ -1.37
VMA8YEL051W ATF2P53296 535 aa6.51□□□□□ -1.37
VMA8YEL051W KEX2P13134 814 aa6.5□□□□□ -1.37
VMA8YEL051W GLC3P32775 704 aa6.5□□□□□ -1.37
VMA8YEL051W ERF2Q06551 359 aa6.5□□□□□ -1.37
VMA8YEL051W LEU3P08638 886 aa6.49□□□□□ -1.37
VMA8YEL051W NIS1P53939 407 aa6.49□□□□□ -1.37
VMA8YEL051W SIT4P20604 311 aa6.48□□□□□ -1.37
VMA8YEL051W MRF1P30775 413 aaPredicted RBP6.48□□□□□ -1.37
VMA8YEL051W SPT16P32558 1035 aaKnown RBP6.46□□□□□ -1.38
VMA8YEL051W RTF1P53064 558 aa6.45□□□□□ -1.38
VMA8YEL051W FPK1P53739 893 aa6.45□□□□□ -1.38
VMA8YEL051W YNL115CP53925 644 aa6.45□□□□□ -1.38
VMA8YEL051W AIM7Q12156 149 aa6.44□□□□□ -1.38
VMA8YEL051W PAT1P25644 796 aaKnown RBP6.43□□□□□ -1.38
VMA8YEL051W RRN7P40992 514 aa6.43□□□□□ -1.38
VMA8YEL051W YMR196WQ04336 1088 aa6.43□□□□□ -1.38
VMA8YEL051W YEL077CQ3E7X8 1277 aa6.43□□□□□ -1.38
VMA8YEL051W ERG12P07277 443 aa6.42□□□□□ -1.38
VMA8YEL051W TUB4P53378 473 aa6.41□□□□□ -1.38
VMA8YEL051W HST2P53686 357 aa6.4□□□□□ -1.38
VMA8YEL051W AGE1Q04412 482 aa6.4□□□□□ -1.38
VMA8YEL051W SLY41P22215 453 aa6.39□□□□□ -1.39
VMA8YEL051W SCJ1P25303 377 aa6.39□□□□□ -1.39
VMA8YEL051W RPN1P38764 993 aaKnown RBP6.38□□□□□ -1.39
VMA8YEL051W PAC1P39946 494 aaKnown RBP6.38□□□□□ -1.39
VMA8YEL051W AIR1P40507 360 aaKnown RBP6.38□□□□□ -1.39
VMA8YEL051W BRE2P43132 505 aa6.38□□□□□ -1.39
VMA8YEL051W MMP1Q12372 583 aa6.37□□□□□ -1.39
VMA8YEL051W GLN1P32288 370 aaKnown RBP6.36□□□□□ -1.39
VMA8YEL051W CST6P40535 587 aa6.36□□□□□ -1.39
VMA8YEL051W CLA4P48562 842 aa6.36□□□□□ -1.39
VMA8YEL051W TYW1Q08960 810 aaKnown RBP6.35□□□□□ -1.39
VMA8YEL051W KIN1P13185 1064 aa6.34□□□□□ -1.39
VMA8YEL051W GAR1P28007 205 aaKnown RBP6.34□□□□□ -1.39
VMA8YEL051W LAM6Q08001 693 aa6.34□□□□□ -1.39
VMA8YEL051W ESS1P22696 170 aa6.33□□□□□ -1.4
VMA8YEL051W KTR1P27810 393 aaKnown RBP6.33□□□□□ -1.4
VMA8YEL051W BDP1P46678 594 aa6.33□□□□□ -1.4
VMA8YEL051W CSN12P47130 423 aa6.33□□□□□ -1.4
VMA8YEL051W PUS6P53294 404 aa6.33□□□□□ -1.4
VMA8YEL051W FRK1Q03002 865 aaPredicted RBP6.33□□□□□ -1.4
VMA8YEL051W MOD5P07884 428 aa6.32□□□□□ -1.4
VMA8YEL051W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
VMA8YEL051W KXD1P53158 218 aa6.3□□□□□ -1.4
VMA8YEL051W TRM1P15565 570 aaKnown RBP6.29□□□□□ -1.4
VMA8YEL051W YJU3P28321 313 aa6.29□□□□□ -1.4
VMA8YEL051W TBF1Q02457 562 aa6.28□□□□□ -1.4
VMA8YEL051W PDC1P06169 563 aaKnown RBP6.27□□□□□ -1.41
VMA8YEL051W HXT10P43581 546 aa6.27□□□□□ -1.41
VMA8YEL051W RPA14P50106 137 aa6.27□□□□□ -1.41
VMA8YEL051W GCR2Q01722 534 aa6.27□□□□□ -1.41
VMA8YEL051W YDL206WQ12424 762 aa6.27□□□□□ -1.41
VMA8YEL051W TPD3P31383 635 aa6.26□□□□□ -1.41
VMA8YEL051W RSC30P38781 883 aa6.26□□□□□ -1.41
VMA8YEL051W PKH3Q03306 898 aaPredicted RBP6.26□□□□□ -1.41
VMA8YEL051W HED1Q03937 162 aa6.26□□□□□ -1.41
VMA8YEL051W YPR097WQ06839 1073 aa6.26□□□□□ -1.41
VMA8YEL051W ALR1Q08269 859 aa6.26□□□□□ -1.41
VMA8YEL051W GBP2P25555 427 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
VMA8YEL051W PUS5Q06244 254 aa6.25□□□□□ -1.41
VMA8YEL051W SSA2P10592 639 aaKnown RBP6.24□□□□□ -1.41
VMA8YEL051W GUA1P38625 525 aaKnown RBP6.24□□□□□ -1.41
VMA8YEL051W RRD1P40454 393 aaKnown RBP6.24□□□□□ -1.41
VMA8YEL051W ARG8P18544 423 aa6.23□□□□□ -1.41
VMA8YEL051W MET22P32179 357 aa6.23□□□□□ -1.41
VMA8YEL051W CDC4P07834 779 aa6.21□□□□□ -1.42
VMA8YEL051W RAD59Q12223 238 aa6.21□□□□□ -1.42
VMA8YEL051W SYH1Q02875 849 aaKnown RBP6.18□□□□□ -1.42
VMA8YEL051W ENV9Q08651 330 aa6.18□□□□□ -1.42
VMA8YEL051W KIP2P28743 706 aa6.16□□□□□ -1.42
VMA8YEL051W LEO1P38439 464 aa6.16□□□□□ -1.42
VMA8YEL051W HPC2Q01448 625 aa6.16□□□□□ -1.42
VMA8YEL051W MET32Q12041 191 aa6.16□□□□□ -1.42
VMA8YEL051W VAC17P25591 423 aa6.14□□□□□ -1.43
VMA8YEL051W ASH1P34233 588 aa6.14□□□□□ -1.43
VMA8YEL051W YDL176WQ12027 708 aa6.14□□□□□ -1.43
VMA8YEL051W IXR1P33417 597 aa6.13□□□□□ -1.43
VMA8YEL051W AFT1P22149 690 aa6.12□□□□□ -1.43
VMA8YEL051W HST3P53687 447 aa6.12□□□□□ -1.43
VMA8YEL051W BRL1P38770 471 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms