RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	UBP9	P39967	754 aa		6.66	□□□□□ -1.34
SUP35	YDR172W	SAM3	Q08986	587 aa		6.65	□□□□□ -1.34
SUP35	YDR172W	YBL029C-A	Q3E756	94 aa		6.65	□□□□□ -1.34
SUP35	YDR172W	WSC3	Q12215	556 aa		6.64	□□□□□ -1.35
SUP35	YDR172W	IQG1	Q12280	1495 aa		6.63	□□□□□ -1.35
SUP35	YDR172W	BUD3	P25558	1636 aa		6.63	□□□□□ -1.35
SUP35	YDR172W	SRB8	P25648	1427 aa		6.62	□□□□□ -1.35
SUP35	YDR172W	PTC3	P34221	468 aa	Known RBP	6.62	□□□□□ -1.35
SUP35	YDR172W	VNX1	P42839	908 aa		6.62	□□□□□ -1.35
SUP35	YDR172W	CKB1	P43639	278 aa		6.62	□□□□□ -1.35
SUP35	YDR172W	YOL036W	Q08206	761 aa		6.61	□□□□□ -1.35
SUP35	YDR172W	DOP1	Q03921	1698 aa		6.6	□□□□□ -1.35
SUP35	YDR172W	NOP53	Q12080	455 aa	Known RBP	6.6	□□□□□ -1.35
SUP35	YDR172W	DRS2	P39524	1355 aa		6.59	□□□□□ -1.35
SUP35	YDR172W	SET4	P42948	560 aa		6.59	□□□□□ -1.35
SUP35	YDR172W	CHC1	P22137	1653 aa	Known RBP	6.58	□□□□□ -1.36
SUP35	YDR172W	MSB4	Q12317	492 aa		6.57	□□□□□ -1.36
SUP35	YDR172W	YSP2	Q06681	1438 aa		6.56	□□□□□ -1.36
SUP35	YDR172W	TRM3	Q07527	1436 aa		6.56	□□□□□ -1.36
SUP35	YDR172W	GYP5	Q12344	894 aa		6.56	□□□□□ -1.36
SUP35	YDR172W	SEC7	P11075	2009 aa	Known RBP	6.56	□□□□□ -1.36
SUP35	YDR172W	YPR148C	Q06523	435 aa		6.56	□□□□□ -1.36
SUP35	YDR172W	GRE2	Q12068	342 aa	Known RBP	6.55	□□□□□ -1.36
SUP35	YDR172W	GCN2	P15442	1659 aa		6.55	□□□□□ -1.36
SUP35	YDR172W	MMS1	Q06211	1407 aa		6.55	□□□□□ -1.36
SUP35	YDR172W	BNI1	P41832	1953 aa		6.55	□□□□□ -1.36
SUP35	YDR172W	TIF11	P38912	153 aa	Known RBP	6.54	□□□□□ -1.36
SUP35	YDR172W	SPP1	Q03012	353 aa		6.54	□□□□□ -1.36
SUP35	YDR172W	ATH1	P48016	1211 aa		6.53	□□□□□ -1.36
SUP35	YDR172W	BUD21	Q08492	214 aa	Predicted RBP	6.53	□□□□□ -1.36
SUP35	YDR172W	BNR1	P40450	1375 aa		6.52	□□□□□ -1.37
SUP35	YDR172W	GUT1	P32190	709 aa		6.52	□□□□□ -1.37
SUP35	YDR172W	DCW1	P36091	449 aa		6.51	□□□□□ -1.37
SUP35	YDR172W	ABP1	P15891	592 aa	Known RBP	6.5	□□□□□ -1.37
SUP35	YDR172W	EAP1	P36041	632 aa	Known RBP	6.49	□□□□□ -1.37
SUP35	YDR172W	ULI1	P43604	169 aa		6.49	□□□□□ -1.37
SUP35	YDR172W	YOR093C	Q12275	1648 aa		6.49	□□□□□ -1.37
SUP35	YDR172W	TRP5	P00931	707 aa	Known RBP	6.49	□□□□□ -1.37
SUP35	YDR172W	VPS70	P47161	811 aa		6.49	□□□□□ -1.37
SUP35	YDR172W	ITT1	Q04638	464 aa		6.49	□□□□□ -1.37
SUP35	YDR172W	IOC2	Q12072	812 aa		6.49	□□□□□ -1.37
SUP35	YDR172W	SOL3	P38858	249 aa		6.48	□□□□□ -1.37
SUP35	YDR172W	HTA1	P04911	132 aa	Known RBP	6.48	□□□□□ -1.37
SUP35	YDR172W	HTA2	P04912	132 aa		6.48	□□□□□ -1.37
SUP35	YDR172W	POL5	P39985	1022 aa	Known RBP	6.46	□□□□□ -1.37
SUP35	YDR172W	NST1	P53935	1240 aa		6.46	□□□□□ -1.37
SUP35	YDR172W	DNF2	Q12675	1612 aa		6.46	□□□□□ -1.38
SUP35	YDR172W	PDR5	P33302	1511 aa	Known RBP	6.45	□□□□□ -1.38
SUP35	YDR172W	NUP188	P52593	1655 aa	Known RBP	6.44	□□□□□ -1.38
SUP35	YDR172W	VMR1	P38735	1592 aa		6.44	□□□□□ -1.38
SUP35	YDR172W	YGR273C	P53329	174 aa		6.43	□□□□□ -1.38
SUP35	YDR172W	LDB19	Q12502	818 aa		6.43	□□□□□ -1.38
SUP35	YDR172W	YEL023C	P39992	682 aa		6.41	□□□□□ -1.38
SUP35	YDR172W	NOP7	P53261	605 aa	Known RBP	6.41	□□□□□ -1.38
SUP35	YDR172W	IML1	P47170	1584 aa		6.41	□□□□□ -1.38
SUP35	YDR172W	DAN4	P47179	1161 aa		6.4	□□□□□ -1.39
SUP35	YDR172W	ORC1	P54784	914 aa	Predicted RBP	6.4	□□□□□ -1.39
SUP35	YDR172W	UBP14	P38237	781 aa	Known RBP	6.39	□□□□□ -1.39
SUP35	YDR172W	PAF1	P38351	445 aa		6.39	□□□□□ -1.39
SUP35	YDR172W	ILV3	P39522	585 aa	Known RBP	6.39	□□□□□ -1.39
SUP35	YDR172W	JIP4	Q03361	876 aa		6.39	□□□□□ -1.39
SUP35	YDR172W	PTC4	P38089	393 aa		6.38	□□□□□ -1.39
SUP35	YDR172W	REF2	P42073	533 aa	Predicted RBP	6.38	□□□□□ -1.39
SUP35	YDR172W	YNL035C	P53962	389 aa	Known RBP	6.38	□□□□□ -1.39
SUP35	YDR172W	SIS1	P25294	352 aa	Known RBP	6.38	□□□□□ -1.39
SUP35	YDR172W	RTG1	P32607	177 aa		6.38	□□□□□ -1.39
SUP35	YDR172W	VHR2	P40041	505 aa		6.38	□□□□□ -1.39
SUP35	YDR172W	YLR326W	Q06170	240 aa	Known RBP	6.38	□□□□□ -1.39
SUP35	YDR172W	MPH3	P0CE00	602 aa		6.37	□□□□□ -1.39
SUP35	YDR172W	FKH1	P40466	484 aa		6.37	□□□□□ -1.39
SUP35	YDR172W	PDR11	P40550	1411 aa		6.37	□□□□□ -1.39
SUP35	YDR172W	AI4	P03878	556 aa		6.37	□□□□□ -1.39
SUP35	YDR172W	KEX1	P09620	729 aa		6.35	□□□□□ -1.39
SUP35	YDR172W	YDR090C	Q03193	310 aa		6.35	□□□□□ -1.39
SUP35	YDR172W	SPT7	P35177	1332 aa		6.34	□□□□□ -1.39
SUP35	YDR172W	SEC61	P32915	480 aa		6.34	□□□□□ -1.39
SUP35	YDR172W	AIR2	Q12476	344 aa	Known RBP	6.34	□□□□□ -1.39
SUP35	YDR172W	DNF3	Q12674	1656 aa		6.34	□□□□□ -1.39
SUP35	YDR172W	RAV1	P47104	1357 aa		6.34	□□□□□ -1.4
SUP35	YDR172W	PBS2	P08018	668 aa		6.34	□□□□□ -1.4
SUP35	YDR172W	URN1	Q06525	465 aa	Known RBP	6.33	□□□□□ -1.4
SUP35	YDR172W	TAF5	P38129	798 aa		6.31	□□□□□ -1.4
SUP35	YDR172W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.31	□□□□□ -1.4	not detected
SUP35	YDR172W	NCR1	Q12200	1170 aa		6.31	□□□□□ -1.4
SUP35	YDR172W	RTC1	Q08281	1341 aa		6.3	□□□□□ -1.4
SUP35	YDR172W	COX6	P00427	148 aa		6.3	□□□□□ -1.4
SUP35	YDR172W	TYS1	P36421	394 aa	Known RBP	6.3	□□□□□ -1.4
SUP35	YDR172W	DSF2	P38213	736 aa		6.3	□□□□□ -1.4
SUP35	YDR172W	YAP3	P38749	330 aa		6.3	□□□□□ -1.4
SUP35	YDR172W	SPB4	P25808	606 aa	Predicted RBP	6.29	□□□□□ -1.4
SUP35	YDR172W	IPL1	P38991	367 aa		6.29	□□□□□ -1.4
SUP35	YDR172W	NUP192	P47054	1683 aa		6.29	□□□□□ -1.4
SUP35	YDR172W	LEU3	P08638	886 aa		6.29	□□□□□ -1.4
SUP35	YDR172W	RAD54	P32863	898 aa		6.29	□□□□□ -1.4
SUP35	YDR172W	ENP1	P38333	483 aa	Known RBP	6.29	□□□□□ -1.4
SUP35	YDR172W	MAK21	Q12176	1025 aa	Known RBP	6.29	□□□□□ -1.4
SUP35	YDR172W	SLI15	P38283	698 aa		6.28	□□□□□ -1.4
SUP35	YDR172W	PML39	Q03760	334 aa		6.28	□□□□□ -1.4
SUP35	YDR172W	HAP1	P0CE41	1502 aa		6.27	□□□□□ -1.41
SUP35	YDR172W	MID1	P41821	548 aa		6.27	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms