RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W YNL035CP53962 389 aaKnown RBP3.03□□□□□ -1.92
MSH5YDL154W CDC73Q06697 393 aa3.03□□□□□ -1.92
MSH5YDL154W TFB4Q12004 338 aa3.03□□□□□ -1.92
MSH5YDL154W RGR1P19263 1082 aa3.02□□□□□ -1.93
MSH5YDL154W GLN1P32288 370 aaKnown RBP3.02□□□□□ -1.93
MSH5YDL154W MVP1P40959 511 aaKnown RBP3.02□□□□□ -1.93
MSH5YDL154W NST1P53935 1240 aa3.02□□□□□ -1.93
MSH5YDL154W PML39Q03760 334 aa3.02□□□□□ -1.93
MSH5YDL154W TUM1Q08686 304 aaKnown RBP3.02□□□□□ -1.93
MSH5YDL154W TYW1Q08960 810 aaKnown RBP3.02□□□□□ -1.93
MSH5YDL154W NCR1Q12200 1170 aa3.02□□□□□ -1.93
MSH5YDL154W YBL036CP38197 257 aa3.02□□□□□ -1.93
MSH5YDL154W YJL007CP47080 104 aa3.02□□□□□ -1.93
MSH5YDL154W RTG1P32607 177 aa3.01□□□□□ -1.93
MSH5YDL154W YCF1P39109 1515 aaKnown RBP3.01□□□□□ -1.93
MSH5YDL154W PKH3Q03306 898 aaPredicted RBP3.01□□□□□ -1.93
MSH5YDL154W DPL1Q05567 589 aa3.01□□□□□ -1.93
MSH5YDL154W YRR1Q12172 810 aa3.01□□□□□ -1.93
MSH5YDL154W MMP1Q12372 583 aa3.01□□□□□ -1.93
MSH5YDL154W MID1P41821 548 aa3□□□□□ -1.93
MSH5YDL154W PKC1P24583 1151 aa3□□□□□ -1.93
MSH5YDL154W NPL4P33755 580 aa3□□□□□ -1.93
MSH5YDL154W FPK1P53739 893 aa3□□□□□ -1.93
MSH5YDL154W ARG8P18544 423 aa2.99□□□□□ -1.93
MSH5YDL154W BCK2P33306 851 aa2.99□□□□□ -1.93
MSH5YDL154W ESS1P22696 170 aa2.99□□□□□ -1.93
MSH5YDL154W NIS1P53939 407 aa2.99□□□□□ -1.93
MSH5YDL154W MPC54Q08550 464 aa2.99□□□□□ -1.93
MSH5YDL154W ISU2Q12056 156 aa2.99□□□□□ -1.93
MSH5YDL154W SEC61P32915 480 aa2.99□□□□□ -1.93
MSH5YDL154W SLY41P22215 453 aa2.98□□□□□ -1.93
MSH5YDL154W HST2P53686 357 aa2.98□□□□□ -1.93
MSH5YDL154W IOC2Q12072 812 aa2.98□□□□□ -1.93
MSH5YDL154W SCJ1P25303 377 aa2.98□□□□□ -1.93
MSH5YDL154W BIM1P40013 344 aa2.98□□□□□ -1.93
MSH5YDL154W YDL129WQ07555 291 aa2.98□□□□□ -1.93
MSH5YDL154W ECM5Q03214 1411 aa2.97□□□□□ -1.93
MSH5YDL154W KTR1P27810 393 aaKnown RBP2.97□□□□□ -1.93
MSH5YDL154W NMA111P53920 997 aa2.97□□□□□ -1.93
MSH5YDL154W TBF1Q02457 562 aa2.97□□□□□ -1.93
MSH5YDL154W RAD59Q12223 238 aa2.97□□□□□ -1.93
MSH5YDL154W ELP4Q02884 456 aaKnown RBP2.97□□□□□ -1.93
MSH5YDL154W GAP1P19145 602 aaPredicted RBP2.96□□□□□ -1.94
MSH5YDL154W SAP30P38429 201 aa2.96□□□□□ -1.94
MSH5YDL154W ATG32P40458 529 aa2.96□□□□□ -1.94
MSH5YDL154W YPR204WQ08995 1032 aa2.96□□□□□ -1.94
MSH5YDL154W BUD4P47136 1447 aa2.96□□□□□ -1.94
MSH5YDL154W YJU3P28321 313 aa2.95□□□□□ -1.94
MSH5YDL154W NUD1P32336 851 aa2.95□□□□□ -1.94
MSH5YDL154W YNL115CP53925 644 aa2.95□□□□□ -1.94
MSH5YDL154W LAM6Q08001 693 aa2.95□□□□□ -1.94
MSH5YDL154W KEX2P13134 814 aa2.94□□□□□ -1.94
MSH5YDL154W GCD11P32481 527 aaKnown RBP2.94□□□□□ -1.94
MSH5YDL154W HAP5Q02516 242 aa2.94□□□□□ -1.94
MSH5YDL154W SIT4P20604 311 aa2.94□□□□□ -1.94
MSH5YDL154W CSE4P36012 229 aa2.94□□□□□ -1.94
MSH5YDL154W RTF1P53064 558 aa2.94□□□□□ -1.94
MSH5YDL154W YNL108CP53929 270 aa2.94□□□□□ -1.94
MSH5YDL154W SSA4P22202 642 aaKnown RBP2.93□□□□□ -1.94
MSH5YDL154W TIF1P10081 395 aaKnown RBP2.93□□□□□ -1.94
MSH5YDL154W RTG2P32608 588 aaKnown RBP2.93□□□□□ -1.94
MSH5YDL154W PDR1P12383 1068 aa2.92□□□□□ -1.94
MSH5YDL154W TRM1P15565 570 aaKnown RBP2.92□□□□□ -1.94
MSH5YDL154W BIO2P32451 375 aa2.92□□□□□ -1.94
MSH5YDL154W PUS6P53294 404 aa2.92□□□□□ -1.94
MSH5YDL154W ERG12P07277 443 aa2.92□□□□□ -1.94
MSH5YDL154W SPT5P27692 1063 aaKnown RBP2.92□□□□□ -1.94
MSH5YDL154W ITT1Q04638 464 aa2.92□□□□□ -1.94
MSH5YDL154W GBP2P25555 427 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
MSH5YDL154W PAT1P25644 796 aaKnown RBP2.91□□□□□ -1.94
MSH5YDL154W ARH1P48360 493 aa2.91□□□□□ -1.94
MSH5YDL154W SSA1P10591 642 aaKnown RBP2.91□□□□□ -1.94
MSH5YDL154W CHL1P22516 861 aaPredicted RBP2.91□□□□□ -1.94
MSH5YDL154W PTC2P39966 464 aaKnown RBP2.91□□□□□ -1.94
MSH5YDL154W SGS1P35187 1447 aa2.91□□□□□ -1.94
MSH5YDL154W CPS1P27614 576 aa2.91□□□□□ -1.94
MSH5YDL154W ISM1P48526 1002 aa2.91□□□□□ -1.94
MSH5YDL154W ERF2Q06551 359 aa2.91□□□□□ -1.94
MSH5YDL154W SPT23P35210 1082 aa2.9□□□□□ -1.95
MSH5YDL154W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
MSH5YDL154W RPL34AP87262 121 aaPredicted RBP2.9□□□□□ -1.95
MSH5YDL154W YPP1P46951 817 aa2.9□□□□□ -1.95
MSH5YDL154W BNI4P53858 892 aa2.9□□□□□ -1.95
MSH5YDL154W YDL206WQ12424 762 aa2.9□□□□□ -1.95
MSH5YDL154W MAK16P10962 306 aaPredicted RBP2.89□□□□□ -1.95
MSH5YDL154W SUB2Q07478 446 aaKnown RBP2.89□□□□□ -1.95
MSH5YDL154W RAM1P22007 431 aa2.89□□□□□ -1.95
MSH5YDL154W KXD1P53158 218 aa2.89□□□□□ -1.95
MSH5YDL154W ALR1Q08269 859 aa2.89□□□□□ -1.95
MSH5YDL154W YDJ1P25491 409 aaKnown RBP2.88□□□□□ -1.95
MSH5YDL154W TTI1P36097 1038 aa2.88□□□□□ -1.95
MSH5YDL154W GEF1P37020 779 aa2.88□□□□□ -1.95
MSH5YDL154W STR2P47164 639 aa2.88□□□□□ -1.95
MSH5YDL154W ENV9Q08651 330 aa2.88□□□□□ -1.95
MSH5YDL154W ENO2P00925 437 aaKnown RBP2.88□□□□□ -1.95
MSH5YDL154W SPT16P32558 1035 aaKnown RBP2.88□□□□□ -1.95
MSH5YDL154W KTR7P40504 517 aa2.88□□□□□ -1.95
MSH5YDL154W RRN7P40992 514 aa2.88□□□□□ -1.95
MSH5YDL154W TUB4P53378 473 aa2.88□□□□□ -1.95
MSH5YDL154W ENO1P00924 437 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms