RNA–Protein interactions for RNA: YDL013W

SLX5, Transcript of Subunit of the Slx5-Slx8 SUMO-targeted ubiquitin ligase complex, yeastyeast

Gene SLX5, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX5YDL013W GIN4Q12263 1142 aa7.91□□□□□ -1.14
SLX5YDL013W HIF1Q12373 385 aa7.91□□□□□ -1.14
SLX5YDL013W SPT2P06843 333 aaPredicted RBP7.9□□□□□ -1.14
SLX5YDL013W HTA1P04911 132 aaKnown RBP7.89□□□□□ -1.15
SLX5YDL013W HTA2P04912 132 aa7.89□□□□□ -1.15
SLX5YDL013W RGR1P19263 1082 aa7.89□□□□□ -1.15
SLX5YDL013W FPR3P38911 411 aaKnown RBP7.89□□□□□ -1.15
SLX5YDL013W PLP2Q12017 286 aa7.89□□□□□ -1.15
SLX5YDL013W KTR1P27810 393 aaKnown RBP7.89□□□□□ -1.15
SLX5YDL013W POL1P13382 1468 aa7.88□□□□□ -1.15
SLX5YDL013W AI4P03878 556 aa7.88□□□□□ -1.15
SLX5YDL013W MPH3P0CE00 602 aa7.88□□□□□ -1.15
SLX5YDL013W TOA1P32773 286 aa7.88□□□□□ -1.15
SLX5YDL013W YJL007CP47080 104 aa7.88□□□□□ -1.15
SLX5YDL013W ILV3P39522 585 aaKnown RBP7.87□□□□□ -1.15
SLX5YDL013W RKR1Q04781 1562 aa7.87□□□□□ -1.15
SLX5YDL013W BIM1P40013 344 aa7.87□□□□□ -1.15
SLX5YDL013W MVP1P40959 511 aaKnown RBP7.87□□□□□ -1.15
SLX5YDL013W TYW1Q08960 810 aaKnown RBP7.87□□□□□ -1.15
SLX5YDL013W RPS0AP32905 252 aaKnown RBP7.86□□□□□ -1.15
SLX5YDL013W SWE1P32944 819 aa7.86□□□□□ -1.15
SLX5YDL013W TOP2P06786 1428 aaKnown RBP7.85□□□□□ -1.15
SLX5YDL013W GLN1P32288 370 aaKnown RBP7.85□□□□□ -1.15
SLX5YDL013W CDC25P04821 1589 aa7.85□□□□□ -1.15
SLX5YDL013W CLB5P30283 435 aa7.85□□□□□ -1.15
SLX5YDL013W SPT7P35177 1332 aa7.85□□□□□ -1.15
SLX5YDL013W TY1B-BRQ12193 1756 aa7.84□□□□□ -1.15
SLX5YDL013W TY1B-GR3Q12316 1755 aa7.84□□□□□ -1.15
SLX5YDL013W TY1B-ORQ92393 1755 aa7.84□□□□□ -1.15
SLX5YDL013W ATG32P40458 529 aa7.84□□□□□ -1.15
SLX5YDL013W STU1P38198 1513 aa7.84□□□□□ -1.15
SLX5YDL013W TY1B-DR3Q99231 1755 aa7.84□□□□□ -1.15
SLX5YDL013W CHD1P32657 1468 aa7.84□□□□□ -1.16
SLX5YDL013W TY2B-BQ12491 1770 aa7.83□□□□□ -1.16
SLX5YDL013W SLI15P38283 698 aa7.83□□□□□ -1.16
SLX5YDL013W NIS1P53939 407 aa7.83□□□□□ -1.16
SLX5YDL013W MSB4Q12317 492 aa7.83□□□□□ -1.16
SLX5YDL013W GAP1P19145 602 aaPredicted RBP7.82□□□□□ -1.16
SLX5YDL013W ENP1P38333 483 aaKnown RBP7.82□□□□□ -1.16
SLX5YDL013W YEL023CP39992 682 aa7.82□□□□□ -1.16
SLX5YDL013W DAN4P47179 1161 aa7.82□□□□□ -1.16
SLX5YDL013W SUB1P54000 292 aaKnown RBP7.82□□□□□ -1.16
SLX5YDL013W CSC1Q06538 782 aa7.81□□□□□ -1.16
SLX5YDL013W TY1B-HO13535 1793 aa7.8□□□□□ -1.16
SLX5YDL013W TY1B-DR5P0C2I2 1755 aa7.8□□□□□ -1.16
SLX5YDL013W TY1B-DR6P0C2I3 1755 aa7.8□□□□□ -1.16
SLX5YDL013W TY1B-LR2P0C2I5 1755 aa7.8□□□□□ -1.16
SLX5YDL013W TY1B-LR3P0C2I6 1755 aaKnown RBP7.8□□□□□ -1.16
SLX5YDL013W TY1B-PR1P0C2I9 1755 aaKnown RBP7.8□□□□□ -1.16
SLX5YDL013W TY1B-PR2P0C2J0 1756 aa7.8□□□□□ -1.16
SLX5YDL013W TY1B-PR3P0C2J1 1755 aaKnown RBP7.8□□□□□ -1.16
SLX5YDL013W TY1B-JR1P47098 1755 aa7.8□□□□□ -1.16
SLX5YDL013W TY1B-ML2Q03434 1755 aaKnown RBP7.8□□□□□ -1.16
SLX5YDL013W TY1B-ER1Q03612 1755 aa7.8□□□□□ -1.16
SLX5YDL013W TY1B-ML1Q04711 1755 aaKnown RBP7.8□□□□□ -1.16
SLX5YDL013W TY1B-GR2Q12269 1755 aa7.8□□□□□ -1.16
SLX5YDL013W TY1B-OLQ12273 1755 aa7.8□□□□□ -1.16
SLX5YDL013W TY1B-PLQ12414 1755 aaKnown RBP7.8□□□□□ -1.16
SLX5YDL013W ESC1Q03661 1658 aaKnown RBP7.8□□□□□ -1.16
SLX5YDL013W FPK1P53739 893 aa7.8□□□□□ -1.16
SLX5YDL013W DNF1P32660 1571 aa7.79□□□□□ -1.16
SLX5YDL013W YOR1P53049 1477 aa7.79□□□□□ -1.16
SLX5YDL013W YMR196WQ04336 1088 aa7.79□□□□□ -1.16
SLX5YDL013W SUB2Q07478 446 aaKnown RBP7.79□□□□□ -1.16
SLX5YDL013W QCR6P00127 147 aa7.79□□□□□ -1.16
SLX5YDL013W RPP1BP10622 106 aaKnown RBP7.79□□□□□ -1.16
SLX5YDL013W YBL036CP38197 257 aa7.79□□□□□ -1.16
SLX5YDL013W HST2P53686 357 aa7.79□□□□□ -1.16
SLX5YDL013W YPR109WQ06104 294 aa7.79□□□□□ -1.16
SLX5YDL013W VPS72Q03388 795 aa7.78□□□□□ -1.16
SLX5YDL013W NHA1Q99271 985 aa7.78□□□□□ -1.16
SLX5YDL013W TIF1P10081 395 aaKnown RBP7.77□□□□□ -1.17
SLX5YDL013W SSA1P10591 642 aaKnown RBP7.77□□□□□ -1.17
SLX5YDL013W RPL34BP40525 121 aaKnown RBP7.77□□□□□ -1.17
SLX5YDL013W WSC3Q12215 556 aa7.77□□□□□ -1.17
SLX5YDL013W PAN1P32521 1480 aa7.77□□□□□ -1.17
SLX5YDL013W TLG1Q03322 224 aa7.77□□□□□ -1.17
SLX5YDL013W CDC73Q06697 393 aa7.77□□□□□ -1.17
SLX5YDL013W SCJ1P25303 377 aa7.76□□□□□ -1.17
SLX5YDL013W MMP1Q12372 583 aa7.76□□□□□ -1.17
SLX5YDL013W SMC4Q12267 1418 aa7.76□□□□□ -1.17
SLX5YDL013W PTC4P38089 393 aa7.75□□□□□ -1.17
SLX5YDL013W FUN12P39730 1002 aaKnown RBP7.75□□□□□ -1.17
SLX5YDL013W PKH3Q03306 898 aaPredicted RBP7.75□□□□□ -1.17
SLX5YDL013W MMS22Q06164 1454 aa7.75□□□□□ -1.17
SLX5YDL013W ERG12P07277 443 aa7.75□□□□□ -1.17
SLX5YDL013W ESS1P22696 170 aa7.75□□□□□ -1.17
SLX5YDL013W FPR4Q06205 392 aaPredicted RBP7.75□□□□□ -1.17
SLX5YDL013W RNA1P11745 407 aaKnown RBP7.74□□□□□ -1.17
SLX5YDL013W RIX1P38883 763 aaPredicted RBP7.74□□□□□ -1.17
SLX5YDL013W TFB4Q12004 338 aa7.74□□□□□ -1.17
SLX5YDL013W RAD59Q12223 238 aa7.74□□□□□ -1.17
SLX5YDL013W BIO2P32451 375 aa7.73□□□□□ -1.17
SLX5YDL013W SPT16P32558 1035 aaKnown RBP7.73□□□□□ -1.17
SLX5YDL013W EAP1P36041 632 aaKnown RBP7.73□□□□□ -1.17
SLX5YDL013W GEF1P37020 779 aa7.73□□□□□ -1.17
SLX5YDL013W TRP5P00931 707 aaKnown RBP7.72□□□□□ -1.17
SLX5YDL013W SSA4P22202 642 aaKnown RBP7.72□□□□□ -1.17
SLX5YDL013W ASF1P32447 279 aa7.72□□□□□ -1.17
SLX5YDL013W YGR130CP53278 816 aa7.72□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms