RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C PDR15Q04182 1529 aaKnown RBP7.37□□□□□ -1.23
PDB1YBR221C MRPL32P25348 183 aa7.37□□□□□ -1.23
PDB1YBR221C YFR016CP43597 1233 aaKnown RBP7.37□□□□□ -1.23
PDB1YBR221C VPS70P47161 811 aa7.37□□□□□ -1.23
PDB1YBR221C MAM3Q12296 706 aa7.37□□□□□ -1.23
PDB1YBR221C SPC42P36094 363 aa7.36□□□□□ -1.23
PDB1YBR221C LAM6Q08001 693 aa7.36□□□□□ -1.23
PDB1YBR221C OSW7P43611 510 aa7.35□□□□□ -1.23
PDB1YBR221C YLR271WQ06152 274 aa7.35□□□□□ -1.23
PDB1YBR221C YPR148CQ06523 435 aa7.35□□□□□ -1.23
PDB1YBR221C SIS2P36024 562 aa7.34□□□□□ -1.23
PDB1YBR221C DSF2P38213 736 aa7.34□□□□□ -1.23
PDB1YBR221C MAK10Q02197 733 aa7.34□□□□□ -1.23
PDB1YBR221C AIM7Q12156 149 aa7.33□□□□□ -1.24
PDB1YBR221C OXP1P28273 1286 aa7.32□□□□□ -1.24
PDB1YBR221C ARO1P08566 1588 aaKnown RBP7.31□□□□□ -1.24
PDB1YBR221C SPT21P35209 758 aa7.31□□□□□ -1.24
PDB1YBR221C YJR008WP47085 338 aa7.31□□□□□ -1.24
PDB1YBR221C TPO2P53283 614 aa7.3□□□□□ -1.24
PDB1YBR221C RRN6P32786 894 aa7.29□□□□□ -1.24
PDB1YBR221C GUA1P38625 525 aaKnown RBP7.29□□□□□ -1.24
PDB1YBR221C NAB3P38996 802 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
PDB1YBR221C REB1P21538 810 aa7.28□□□□□ -1.24
PDB1YBR221C SSF1P38789 453 aaPredicted RBP7.28□□□□□ -1.24
PDB1YBR221C SET1P38827 1080 aaKnown RBP7.28□□□□□ -1.24
PDB1YBR221C HEM3P28789 327 aa7.27□□□□□ -1.25
PDB1YBR221C GLC3P32775 704 aa7.27□□□□□ -1.25
PDB1YBR221C RPS0BP46654 252 aaKnown RBP7.27□□□□□ -1.25
PDB1YBR221C DNF3Q12674 1656 aa7.26□□□□□ -1.25
PDB1YBR221C BNR1P40450 1375 aa7.26□□□□□ -1.25
PDB1YBR221C OCA5P38738 679 aa7.26□□□□□ -1.25
PDB1YBR221C YIL055CP40523 627 aaKnown RBP7.26□□□□□ -1.25
PDB1YBR221C YAF9P53930 226 aa7.25□□□□□ -1.25
PDB1YBR221C HPC2Q01448 625 aa7.25□□□□□ -1.25
PDB1YBR221C FPR4Q06205 392 aaPredicted RBP7.25□□□□□ -1.25
PDB1YBR221C TY3B-GQ99315 1547 aa7.24□□□□□ -1.25
PDB1YBR221C PBS2P08018 668 aa7.24□□□□□ -1.25
PDB1YBR221C BUD21Q08492 214 aaPredicted RBP7.24□□□□□ -1.25
PDB1YBR221C SSA4P22202 642 aaKnown RBP7.22□□□□□ -1.25
PDB1YBR221C MLP2P40457 1679 aa7.22□□□□□ -1.25
PDB1YBR221C NMD2P38798 1089 aaKnown RBP7.21□□□□□ -1.26
PDB1YBR221C YMR196WQ04336 1088 aa7.21□□□□□ -1.26
PDB1YBR221C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
PDB1YBR221C PDR1P12383 1068 aa7.19□□□□□ -1.26
PDB1YBR221C CHC1P22137 1653 aaKnown RBP7.19□□□□□ -1.26
PDB1YBR221C CDC3P32457 520 aaKnown RBP7.18□□□□□ -1.26
PDB1YBR221C TFB3Q03290 321 aa7.18□□□□□ -1.26
PDB1YBR221C CST9Q06032 482 aa7.18□□□□□ -1.26
PDB1YBR221C MAK21Q12176 1025 aaKnown RBP7.18□□□□□ -1.26
PDB1YBR221C SEC7P11075 2009 aaKnown RBP7.17□□□□□ -1.26
PDB1YBR221C TOA1P32773 286 aa7.17□□□□□ -1.26
PDB1YBR221C YGL015CP33199 130 aa7.17□□□□□ -1.26
PDB1YBR221C THI12P42883 340 aa7.17□□□□□ -1.26
PDB1YBR221C THI5P43534 340 aa7.17□□□□□ -1.26
PDB1YBR221C THI11P47183 340 aa7.17□□□□□ -1.26
PDB1YBR221C RPL34AP87262 121 aaPredicted RBP7.17□□□□□ -1.26
PDB1YBR221C UBX5Q06682 500 aa7.17□□□□□ -1.26
PDB1YBR221C THI13Q07748 340 aa7.17□□□□□ -1.26
PDB1YBR221C YSP2Q06681 1438 aa7.17□□□□□ -1.26
PDB1YBR221C ALD4P46367 519 aaKnown RBP7.16□□□□□ -1.26
PDB1YBR221C SEN54Q02825 467 aaPredicted RBP7.16□□□□□ -1.26
PDB1YBR221C CAT8P39113 1433 aa7.16□□□□□ -1.26
PDB1YBR221C TOM20P35180 183 aa7.15□□□□□ -1.26
PDB1YBR221C NNF1P47149 201 aa7.15□□□□□ -1.26
PDB1YBR221C KEX1P09620 729 aa7.14□□□□□ -1.27
PDB1YBR221C ZDS1P50111 915 aaKnown RBP7.14□□□□□ -1.27
PDB1YBR221C GLN1P32288 370 aaKnown RBP7.13□□□□□ -1.27
PDB1YBR221C HIF1Q12373 385 aa7.13□□□□□ -1.27
PDB1YBR221C RAM2P29703 316 aa7.12□□□□□ -1.27
PDB1YBR221C IPL1P38991 367 aa7.11□□□□□ -1.27
PDB1YBR221C IES2P40154 320 aa7.11□□□□□ -1.27
PDB1YBR221C RSM7P47150 247 aa7.11□□□□□ -1.27
PDB1YBR221C DIT2P21595 489 aa7.1□□□□□ -1.27
PDB1YBR221C BIM1P40013 344 aa7.1□□□□□ -1.27
PDB1YBR221C CST6P40535 587 aa7.1□□□□□ -1.27
PDB1YBR221C KIP3P53086 805 aaKnown RBP7.1□□□□□ -1.27
PDB1YBR221C TY4A-JP47023 414 aa7.09□□□□□ -1.27
PDB1YBR221C ATF2P53296 535 aa7.09□□□□□ -1.27
PDB1YBR221C RRP14P36080 434 aaKnown RBP7.08□□□□□ -1.28
PDB1YBR221C NUP42P49686 430 aaKnown RBP7.08□□□□□ -1.28
PDB1YBR221C PKC1P24583 1151 aa7.07□□□□□ -1.28
PDB1YBR221C RNH70P53331 553 aa7.07□□□□□ -1.28
PDB1YBR221C YJL007CP47080 104 aa7.06□□□□□ -1.28
PDB1YBR221C EBP2P36049 427 aaKnown RBP7.05□□□□□ -1.28
PDB1YBR221C FPR3P38911 411 aaKnown RBP7.05□□□□□ -1.28
PDB1YBR221C RPT2P40327 437 aaKnown RBP7.05□□□□□ -1.28
PDB1YBR221C ATG32P40458 529 aa7.05□□□□□ -1.28
PDB1YBR221C CWC22P53333 577 aaKnown RBP7.05□□□□□ -1.28
PDB1YBR221C BRE1Q07457 700 aaKnown RBP7.05□□□□□ -1.28
PDB1YBR221C HAP1P0CE41 1502 aa7.05□□□□□ -1.28
PDB1YBR221C GEA1P47102 1408 aaPredicted RBP7.04□□□□□ -1.28
PDB1YBR221C RPL34BP40525 121 aaKnown RBP7.04□□□□□ -1.28
PDB1YBR221C HAT1Q12341 374 aa7.04□□□□□ -1.28
PDB1YBR221C CPS1P27614 576 aa7.03□□□□□ -1.28
PDB1YBR221C RPS0AP32905 252 aaKnown RBP7.03□□□□□ -1.28
PDB1YBR221C TPM2P40414 161 aa7.03□□□□□ -1.28
PDB1YBR221C NOP2P40991 618 aaKnown RBP7.03□□□□□ -1.28
PDB1YBR221C GAL11P19659 1081 aa7.02□□□□□ -1.29
PDB1YBR221C TSR4P25040 408 aa7.02□□□□□ -1.29
PDB1YBR221C PMC1P38929 1173 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms