RNA–Protein interactions for RNA: ENST00000642018.1

CASC19-274, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 970 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-274ENST00000642018 CUX1P39880 1505 aa11.65□□□□□ -0.55
CASC19-274ENST00000642018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
CASC19-274ENST00000642018 CD44P16070 742 aaKnown RBP11.64□□□□□ -0.55
CASC19-274ENST00000642018 PDAP1Q13442 181 aaKnown RBP11.64□□□□□ -0.55
CASC19-274ENST00000642018 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
CASC19-274ENST00000642018 BCL11BQ9C0K0 894 aaPredicted RBP11.64□□□□□ -0.55
CASC19-274ENST00000642018 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
CASC19-274ENST00000642018 VSIG10Q8N0Z9 540 aa11.63□□□□□ -0.55
CASC19-274ENST00000642018 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
CASC19-274ENST00000642018 PCDHB13Q9Y5F0 798 aa11.62□□□□□ -0.55
CASC19-274ENST00000642018 ABCA10Q8WWZ4 1543 aa11.61□□□□□ -0.55
CASC19-274ENST00000642018 PBRM1Q86U86 1689 aa11.61□□□□□ -0.55
CASC19-274ENST00000642018 GRIN2AQ12879 1464 aa11.58□□□□□ -0.56
CASC19-274ENST00000642018 WRNQ14191 1432 aaPredicted RBP eCLIP11.57□□□□□ -0.56
CASC19-274ENST00000642018 ABCA5Q8WWZ7 1642 aa11.57□□□□□ -0.56
CASC19-274ENST00000642018 NUP160Q12769 1436 aa11.56□□□□□ -0.56
CASC19-274ENST00000642018 PCDHB8Q9UN66 801 aa11.56□□□□□ -0.56
CASC19-274ENST00000642018 PSEN1P49768 467 aa11.55□□□□□ -0.56
CASC19-274ENST00000642018 CEP170Q5SW79 1584 aa11.54□□□□□ -0.56
CASC19-274ENST00000642018 FHAD1B1AJZ9 1412 aa11.53□□□□□ -0.56
CASC19-274ENST00000642018 KIF12Q96FN5 646 aa11.53□□□□□ -0.56
CASC19-274ENST00000642018 MAP3K13O43283 966 aa11.52□□□□□ -0.57
CASC19-274ENST00000642018 EVX2Q03828 476 aa11.52□□□□□ -0.57
CASC19-274ENST00000642018 SHROOM2Q13796 1616 aa11.51□□□□□ -0.57
CASC19-274ENST00000642018 ERCC6L2Q5T890 1561 aa11.5□□□□□ -0.57
CASC19-274ENST00000642018 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
CASC19-274ENST00000642018 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
CASC19-274ENST00000642018 FAM69CQ0P6D2 419 aa11.49□□□□□ -0.57
CASC19-274ENST00000642018 IFNL1Q8IU54 200 aa11.49□□□□□ -0.57
CASC19-274ENST00000642018 JPH4Q96JJ6 628 aa11.49□□□□□ -0.57
CASC19-274ENST00000642018 PRG4Q92954 1404 aaPredicted RBP11.48□□□□□ -0.57
CASC19-274ENST00000642018 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
CASC19-274ENST00000642018 KIF13AQ9H1H9 1805 aa11.46□□□□□ -0.57
CASC19-274ENST00000642018 ABCC10Q5T3U5 1492 aa11.46□□□□□ -0.57
CASC19-274ENST00000642018 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.57
CASC19-274ENST00000642018 NKX1-1Q15270 411 aaPredicted RBP11.45□□□□□ -0.58
CASC19-274ENST00000642018 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
CASC19-274ENST00000642018 GTPBP6O43824 516 aaPredicted RBP11.44□□□□□ -0.58
CASC19-274ENST00000642018 CLCN6P51797 869 aa11.44□□□□□ -0.58
CASC19-274ENST00000642018 TSHZ2Q9NRE2 1034 aa11.44□□□□□ -0.58
CASC19-274ENST00000642018 MAPKBP1O60336 1514 aa11.43□□□□□ -0.58
CASC19-274ENST00000642018 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
CASC19-274ENST00000642018 BCANQ96GW7 911 aa11.41□□□□□ -0.58
CASC19-274ENST00000642018 CABP2Q9NPB3 220 aa11.41□□□□□ -0.58
CASC19-274ENST00000642018 BIVM-ERCC5R4GMW8 1640 aa11.4□□□□□ -0.58
CASC19-274ENST00000642018 SOX12O15370 315 aa11.39□□□□□ -0.59
CASC19-274ENST00000642018 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
CASC19-274ENST00000642018 NLRP6P59044 892 aa11.38□□□□□ -0.59
CASC19-274ENST00000642018 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
CASC19-274ENST00000642018 KDM6BO15054 1643 aa11.37□□□□□ -0.59
CASC19-274ENST00000642018 DIP2BQ9P265 1576 aa11.37□□□□□ -0.59
CASC19-274ENST00000642018 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
CASC19-274ENST00000642018 EFCAB3Q8N7B9 438 aa11.34□□□□□ -0.59
CASC19-274ENST00000642018 MS4A3Q96HJ5 214 aa11.34□□□□□ -0.59
CASC19-274ENST00000642018 RUSC2Q8N2Y8 1516 aa11.34□□□□□ -0.59
CASC19-274ENST00000642018 KIAA0586Q9BVV6 1533 aa11.34□□□□□ -0.59
CASC19-274ENST00000642018 SUPT5HO00267 1087 aaKnown RBP11.33□□□□□ -0.6
CASC19-274ENST00000642018 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
CASC19-274ENST00000642018 ADCY10Q96PN6 1610 aa11.32□□□□□ -0.6
CASC19-274ENST00000642018 KDM2AQ9Y2K7 1162 aa11.32□□□□□ -0.6
CASC19-274ENST00000642018 TIE1P35590 1138 aa11.31□□□□□ -0.6
CASC19-274ENST00000642018 WDR70Q9NW82 654 aa11.31□□□□□ -0.6
CASC19-274ENST00000642018 PTPRGP23470 1445 aa11.3□□□□□ -0.6
CASC19-274ENST00000642018 CARMIL2Q6F5E8 1435 aa11.29□□□□□ -0.6
CASC19-274ENST00000642018 MFRPQ9BY79 579 aa11.29□□□□□ -0.6
CASC19-274ENST00000642018 PLB1Q6P1J6 1458 aa11.28□□□□□ -0.6
CASC19-274ENST00000642018 TSPOAP1O95153 1857 aa11.27□□□□□ -0.6
CASC19-274ENST00000642018 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
CASC19-274ENST00000642018 NBR1Q14596 966 aa11.26□□□□□ -0.61
CASC19-274ENST00000642018 IGF1RP08069 1367 aa11.26□□□□□ -0.61
CASC19-274ENST00000642018 ABCC2Q92887 1545 aa11.25□□□□□ -0.61
CASC19-274ENST00000642018 GABBR2O75899 941 aa11.25□□□□□ -0.61
CASC19-274ENST00000642018 PHF8Q9UPP1 1060 aa11.25□□□□□ -0.61
CASC19-274ENST00000642018 TNIKQ9UKE5 1360 aa11.25□□□□□ -0.61
CASC19-274ENST00000642018 GLI2P10070 1586 aa11.24□□□□□ -0.61
CASC19-274ENST00000642018 CUL7Q14999 1698 aa11.24□□□□□ -0.61
CASC19-274ENST00000642018 ASXL2Q76L83 1435 aa11.23□□□□□ -0.61
CASC19-274ENST00000642018 ADGRL1O94910 1474 aa11.22□□□□□ -0.61
CASC19-274ENST00000642018 TEX14Q8IWB6 1497 aa11.22□□□□□ -0.61
CASC19-274ENST00000642018 UHRF1BP1LA0JNW5 1464 aa11.21□□□□□ -0.61
CASC19-274ENST00000642018 TTLL13PA6NNM8 815 aa11.21□□□□□ -0.61
CASC19-274ENST00000642018 P3H3Q8IVL6 736 aa11.21□□□□□ -0.61
CASC19-274ENST00000642018 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
CASC19-274ENST00000642018 CARMIL1Q5VZK9 1371 aa11.19□□□□□ -0.62
CASC19-274ENST00000642018 TTBK1Q5TCY1 1321 aaPredicted RBP11.19□□□□□ -0.62
CASC19-274ENST00000642018 FBXO22Q8NEZ5 403 aa11.19□□□□□ -0.62
CASC19-274ENST00000642018 UACAQ9BZF9 1416 aa11.18□□□□□ -0.62
CASC19-274ENST00000642018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.627e-8■□□□□ 10.2
CASC19-274ENST00000642018 TRIM35Q9UPQ4 493 aa11.18□□□□□ -0.62
CASC19-274ENST00000642018 TRPC6Q9Y210 931 aa11.18□□□□□ -0.62
CASC19-274ENST00000642018 G3V3G9 751 aa11.17□□□□□ -0.62
CASC19-274ENST00000642018 BMP2KQ9NSY1 1161 aaPredicted RBP11.17□□□□□ -0.62
CASC19-274ENST00000642018 LHX8Q68G74 356 aa11.15□□□□□ -0.62
CASC19-274ENST00000642018 IQGAP2Q13576 1575 aa11.15□□□□□ -0.62
CASC19-274ENST00000642018 EPRSP07814 1512 aaKnown RBP11.14□□□□□ -0.63
CASC19-274ENST00000642018 KDM5BQ9UGL1 1544 aa11.14□□□□□ -0.63
CASC19-274ENST00000642018 PPRC1Q5VV67 1664 aaKnown RBP11.14□□□□□ -0.63
CASC19-274ENST00000642018 HECW2Q9P2P5 1572 aa11.13□□□□□ -0.63
CASC19-274ENST00000642018 FAM9AQ8IZU1 332 aaPredicted RBP11.13□□□□□ -0.63
CASC19-274ENST00000642018 DCBLD2Q96PD2 775 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms