RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 TSPY10P0CW01 314 aa7.54□□□□□ -1.2
SCARB2-218ENST00000639715 ARXQ96QS3 562 aa7.54□□□□□ -1.2
SCARB2-218ENST00000639715 SLC4A1APQ9BWU0 796 aaKnown RBP7.54□□□□□ -1.2
SCARB2-218ENST00000639715 TOP2BQ02880 1626 aa7.53□□□□□ -1.2
SCARB2-218ENST00000639715 PDIA4P13667 645 aaKnown RBP7.53□□□□□ -1.2
SCARB2-218ENST00000639715 KCNH8Q96L42 1107 aa7.53□□□□□ -1.2
SCARB2-218ENST00000639715 MRS2Q9HD23 443 aa7.53□□□□□ -1.2
SCARB2-218ENST00000639715 FAM9BQ8IZU0 186 aa7.53□□□□□ -1.2
SCARB2-218ENST00000639715 FANCD2Q9BXW9 1451 aa7.52□□□□□ -1.2
SCARB2-218ENST00000639715 IGF1RP08069 1367 aa7.52□□□□□ -1.21
SCARB2-218ENST00000639715 PPP1R15AO75807 674 aaPredicted RBP7.52□□□□□ -1.21
SCARB2-218ENST00000639715 RBM10P98175 930 aaKnown RBP7.52□□□□□ -1.21
SCARB2-218ENST00000639715 CHMP7Q8WUX9 453 aaPredicted RBP7.52□□□□□ -1.21
SCARB2-218ENST00000639715 PRXQ9BXM0 1461 aa7.52□□□□□ -1.21
SCARB2-218ENST00000639715 GLI2P10070 1586 aa7.52□□□□□ -1.21
SCARB2-218ENST00000639715 PNNQ9H307 717 aaKnown RBP7.52□□□□□ -1.21
SCARB2-218ENST00000639715 USP35Q9P2H5 1018 aa7.51□□□□□ -1.21
SCARB2-218ENST00000639715 SOCS7O14512 581 aa7.5□□□□□ -1.21
SCARB2-218ENST00000639715 GSE1Q14687 1217 aa7.5□□□□□ -1.21
SCARB2-218ENST00000639715 MAGI1Q96QZ7 1491 aaPredicted RBP7.5□□□□□ -1.21
SCARB2-218ENST00000639715 TMC1Q8TDI8 760 aa7.5□□□□□ -1.21
SCARB2-218ENST00000639715 PLEKHD1A6NEE1 506 aa7.5□□□□□ -1.21
SCARB2-218ENST00000639715 CFDP1Q9UEE9 299 aaPredicted RBP7.49□□□□□ -1.21
SCARB2-218ENST00000639715 RRBP1Q9P2E9 1410 aaKnown RBP7.49□□□□□ -1.21
SCARB2-218ENST00000639715 DNMBPQ6XZF7 1577 aa7.49□□□□□ -1.21
SCARB2-218ENST00000639715 IQSEC2Q5JU85 1478 aa7.49□□□□□ -1.21
SCARB2-218ENST00000639715 DIP2BQ9P265 1576 aa7.48□□□□□ -1.21
SCARB2-218ENST00000639715 FHOD3Q2V2M9 1422 aa7.48□□□□□ -1.21
SCARB2-218ENST00000639715 BCL11BQ9C0K0 894 aaPredicted RBP7.47□□□□□ -1.21
SCARB2-218ENST00000639715 FGD5Q6ZNL6 1462 aa7.47□□□□□ -1.21
SCARB2-218ENST00000639715 TNNT2P45379 298 aaPredicted RBP7.47□□□□□ -1.21
SCARB2-218ENST00000639715 TDRD9Q8NDG6 1382 aaKnown RBP7.47□□□□□ -1.21
SCARB2-218ENST00000639715 AMER1Q5JTC6 1135 aaPredicted RBP7.46□□□□□ -1.21
SCARB2-218ENST00000639715 NCLP19338 710 aaKnown RBP7.46□□□□□ -1.22
SCARB2-218ENST00000639715 RRP9O43818 475 aaKnown RBP7.45□□□□□ -1.22
SCARB2-218ENST00000639715 LRRC9Q6ZRR7 1453 aa7.45□□□□□ -1.22
SCARB2-218ENST00000639715 FGD1P98174 961 aa7.45□□□□□ -1.22
SCARB2-218ENST00000639715 FAM43AQ8N2R8 423 aa7.45□□□□□ -1.22
SCARB2-218ENST00000639715 ABCC10Q5T3U5 1492 aa7.44□□□□□ -1.22
SCARB2-218ENST00000639715 CUX1P39880 1505 aa7.44□□□□□ -1.22
SCARB2-218ENST00000639715 HSPA5P11021 654 aaKnown RBP7.43□□□□□ -1.22
SCARB2-218ENST00000639715 DDRGK1Q96HY6 314 aa7.43□□□□□ -1.22
SCARB2-218ENST00000639715 KDM2AQ9Y2K7 1162 aa7.43□□□□□ -1.22
SCARB2-218ENST00000639715 CDK11BP21127 795 aaKnown RBP7.43□□□□□ -1.22
SCARB2-218ENST00000639715 MPHOSPH9Q99550 1183 aa7.43□□□□□ -1.22
SCARB2-218ENST00000639715 PPRC1Q5VV67 1664 aaKnown RBP7.42□□□□□ -1.22
SCARB2-218ENST00000639715 SPATA31D1Q6ZQQ2 1576 aa7.42□□□□□ -1.22
SCARB2-218ENST00000639715 LMTK3Q96Q04 1460 aa7.42□□□□□ -1.22
SCARB2-218ENST00000639715 CASKIN1Q8WXD9 1431 aa7.42□□□□□ -1.22
SCARB2-218ENST00000639715 PHLDB1Q86UU1 1377 aa7.41□□□□□ -1.22
SCARB2-218ENST00000639715 CARD11Q9BXL7 1154 aa7.41□□□□□ -1.22
SCARB2-218ENST00000639715 FGD6Q6ZV73 1430 aa7.41□□□□□ -1.22
SCARB2-218ENST00000639715 AAMPQ13685 434 aa7.41□□□□□ -1.22
SCARB2-218ENST00000639715 CCDC18Q5T9S5 1454 aa7.4□□□□□ -1.22
SCARB2-218ENST00000639715 C11orf95C9JLR9 678 aaPredicted RBP7.4□□□□□ -1.22
SCARB2-218ENST00000639715 FRAT1Q92837 279 aaPredicted RBP7.4□□□□□ -1.22
SCARB2-218ENST00000639715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.4□□□□□ -1.22
SCARB2-218ENST00000639715 FYCO1Q9BQS8 1478 aa7.4□□□□□ -1.22
SCARB2-218ENST00000639715 EFCAB5A4FU69 1503 aa7.4□□□□□ -1.23
SCARB2-218ENST00000639715 KIAA0586Q9BVV6 1533 aa7.4□□□□□ -1.23
SCARB2-218ENST00000639715 CANXP27824 592 aaKnown RBP7.4□□□□□ -1.23
SCARB2-218ENST00000639715 TRIM44Q96DX7 344 aaPredicted RBP7.4□□□□□ -1.23
SCARB2-218ENST00000639715 MAP3K1Q13233 1512 aa7.39□□□□□ -1.23
SCARB2-218ENST00000639715 CARMIL2Q6F5E8 1435 aa7.39□□□□□ -1.23
SCARB2-218ENST00000639715 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.39□□□□□ -1.23
SCARB2-218ENST00000639715 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.39□□□□□ -1.23
SCARB2-218ENST00000639715 BIVM-ERCC5R4GMW8 1640 aa7.39□□□□□ -1.23
SCARB2-218ENST00000639715 ARID3AQ99856 593 aa7.39□□□□□ -1.23
SCARB2-218ENST00000639715 UACAQ9BZF9 1416 aa7.39□□□□□ -1.23
SCARB2-218ENST00000639715 GAPVD1Q14C86 1478 aa7.39□□□□□ -1.23
SCARB2-218ENST00000639715 TOPBP1Q92547 1522 aa7.39□□□□□ -1.23
SCARB2-218ENST00000639715 L1TD1Q5T7N2 865 aaKnown RBP7.38□□□□□ -1.23
SCARB2-218ENST00000639715 BBXQ8WY36 941 aaPredicted RBP7.38□□□□□ -1.23
SCARB2-218ENST00000639715 TIAM1Q13009 1591 aa7.38□□□□□ -1.23
SCARB2-218ENST00000639715 MYOM3Q5VTT5 1437 aa7.38□□□□□ -1.23
SCARB2-218ENST00000639715 CDCA8Q53HL2 280 aa7.38□□□□□ -1.23
SCARB2-218ENST00000639715 L3MBTL2Q969R5 705 aa7.38□□□□□ -1.23
SCARB2-218ENST00000639715 RAD54L2Q9Y4B4 1467 aa7.38□□□□□ -1.23
SCARB2-218ENST00000639715 PBRM1Q86U86 1689 aa7.38□□□□□ -1.23
SCARB2-218ENST00000639715 TAF7LQ5H9L4 462 aa7.38□□□□□ -1.23
SCARB2-218ENST00000639715 WDR43Q15061 677 aaKnown RBP eCLIP7.37□□□□□ -1.23
SCARB2-218ENST00000639715 ANKRD30AQ9BXX3 1397 aa7.37□□□□□ -1.23
SCARB2-218ENST00000639715 SYNJ2O15056 1496 aa7.36□□□□□ -1.23
SCARB2-218ENST00000639715 KDM4FA0A1W2PPD8 638 aa7.36□□□□□ -1.23
SCARB2-218ENST00000639715 ZNF608Q9ULD9 1512 aaPredicted RBP7.36□□□□□ -1.23
SCARB2-218ENST00000639715 PKD2Q13563 968 aa7.36□□□□□ -1.23
SCARB2-218ENST00000639715 RGS3P49796 1198 aa7.35□□□□□ -1.23
SCARB2-218ENST00000639715 PAXIP1Q6ZW49 1069 aaPredicted RBP7.35□□□□□ -1.23
SCARB2-218ENST00000639715 ADGRL1O94910 1474 aa7.35□□□□□ -1.23
SCARB2-218ENST00000639715 NFKBIBQ15653 356 aa7.35□□□□□ -1.23
SCARB2-218ENST00000639715 RGL3Q3MIN7 710 aa7.34□□□□□ -1.23
SCARB2-218ENST00000639715 RSPH4AQ5TD94 716 aa7.34□□□□□ -1.23
SCARB2-218ENST00000639715 ANP32BQ92688 251 aaKnown RBP7.34□□□□□ -1.23
SCARB2-218ENST00000639715 ROCK2O75116 1388 aaKnown RBP7.34□□□□□ -1.23
SCARB2-218ENST00000639715 NCOA2Q15596 1464 aa7.34□□□□□ -1.24
SCARB2-218ENST00000639715 NPM1P06748 294 aaKnown RBP eCLIP7.34□□□□□ -1.24
SCARB2-218ENST00000639715 FOXD1Q16676 465 aa7.34□□□□□ -1.24
SCARB2-218ENST00000639715 AQRO60306 1485 aaKnown RBP eCLIP7.33□□□□□ -1.24
SCARB2-218ENST00000639715 DCAF11Q8TEB1 546 aa7.33□□□□□ -1.24
SCARB2-218ENST00000639715 WASHC2AQ641Q2 1341 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms