RNA–Protein interactions for RNA: ENST00000638754.1

KCNMA1-244, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 5,069 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-244ENST00000638754 CCDC18Q5T9S5 1454 aa11.61□□□□□ -0.55
KCNMA1-244ENST00000638754 L3MBTL2Q969R5 705 aa11.6□□□□□ -0.55
KCNMA1-244ENST00000638754 PNNQ9H307 717 aaKnown RBP11.59□□□□□ -0.55
KCNMA1-244ENST00000638754 CCER2I3L3R5 266 aa11.59□□□□□ -0.55
KCNMA1-244ENST00000638754 ROCK2O75116 1388 aaKnown RBP11.59□□□□□ -0.55
KCNMA1-244ENST00000638754 PPP4R2Q9NY27 417 aa11.58□□□□□ -0.56
KCNMA1-244ENST00000638754 BECN1Q14457 450 aa11.57□□□□□ -0.56
KCNMA1-244ENST00000638754 PTPRGP23470 1445 aa11.56□□□□□ -0.56
KCNMA1-244ENST00000638754 WASHC2CQ9Y4E1 1318 aa11.56□□□□□ -0.56
KCNMA1-244ENST00000638754 RGS3P49796 1198 aa11.56□□□□□ -0.56
KCNMA1-244ENST00000638754 HDGFL2Q7Z4V5 671 aaPredicted RBP11.56□□□□□ -0.56
KCNMA1-244ENST00000638754 KTN1Q86UP2 1357 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-244ENST00000638754 IGF1RP08069 1367 aa11.55□□□□□ -0.56
KCNMA1-244ENST00000638754 DDRGK1Q96HY6 314 aa11.55□□□□□ -0.56
KCNMA1-244ENST00000638754 MS4A1P11836 297 aa11.55□□□□□ -0.56
KCNMA1-244ENST00000638754 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
KCNMA1-244ENST00000638754 CHMP4BQ9H444 224 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-244ENST00000638754 B4GALNT3Q6L9W6 998 aa11.53□□□□□ -0.56
KCNMA1-244ENST00000638754 GAPVD1Q14C86 1478 aa11.52□□□□□ -0.56
KCNMA1-244ENST00000638754 NCAPD3P42695 1498 aa11.52□□□□□ -0.57
KCNMA1-244ENST00000638754 CYB5RLQ6IPT4 315 aa11.51□□□□□ -0.57
KCNMA1-244ENST00000638754 U2AF1L5P0DN76 240 aaPredicted RBP11.51□□□□□ -0.57
KCNMA1-244ENST00000638754 U2AF1Q01081 240 aaKnown RBP eCLIP11.51□□□□□ -0.57
KCNMA1-244ENST00000638754 CASC1Q6TDU7 716 aa11.51□□□□□ -0.57
KCNMA1-244ENST00000638754 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
KCNMA1-244ENST00000638754 NUTM2DQ5VT03 806 aaPredicted RBP11.51□□□□□ -0.57
KCNMA1-244ENST00000638754 RALBP1Q15311 655 aa11.5□□□□□ -0.57
KCNMA1-244ENST00000638754 PAK3O75914 559 aaPredicted RBP11.5□□□□□ -0.57
KCNMA1-244ENST00000638754 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
KCNMA1-244ENST00000638754 EIF3AQ14152 1382 aaKnown RBP11.49□□□□□ -0.57
KCNMA1-244ENST00000638754 RTF1Q92541 710 aaKnown RBP11.49□□□□□ -0.57
KCNMA1-244ENST00000638754 OS9Q13438 667 aaPredicted RBP11.48□□□□□ -0.57
KCNMA1-244ENST00000638754 EIF5BO60841 1220 aaKnown RBP11.47□□□□□ -0.57
KCNMA1-244ENST00000638754 GOLGA6L22H0YM25 854 aa11.47□□□□□ -0.57
KCNMA1-244ENST00000638754 EID1Q9Y6B2 187 aa11.47□□□□□ -0.57
KCNMA1-244ENST00000638754 DHX57Q6P158 1386 aaKnown RBP11.47□□□□□ -0.57
KCNMA1-244ENST00000638754 TERF2IPQ9NYB0 399 aa11.47□□□□□ -0.57
KCNMA1-244ENST00000638754 NCLP19338 710 aaKnown RBP11.46□□□□□ -0.57
KCNMA1-244ENST00000638754 CCDC144AA2RUR9 1427 aa11.46□□□□□ -0.57
KCNMA1-244ENST00000638754 NPHP1O15259 732 aa11.46□□□□□ -0.57
KCNMA1-244ENST00000638754 TRAK1Q9UPV9 953 aa11.46□□□□□ -0.58
KCNMA1-244ENST00000638754 ST20-MTHFSA0A0A6YYL1 179 aa11.45□□□□□ -0.58
KCNMA1-244ENST00000638754 NLRP13Q86W25 1043 aa11.44□□□□□ -0.58
KCNMA1-244ENST00000638754 AQRO60306 1485 aaKnown RBP eCLIP11.44□□□□□ -0.58
KCNMA1-244ENST00000638754 RCAN3Q9UKA8 241 aa11.43□□□□□ -0.58
KCNMA1-244ENST00000638754 ANP32EQ9BTT0 268 aa11.42□□□□□ -0.58
KCNMA1-244ENST00000638754 NUTM2FA1L443 756 aa11.42□□□□□ -0.58
KCNMA1-244ENST00000638754 IPO8O15397 1037 aaKnown RBP11.42□□□□□ -0.58
KCNMA1-244ENST00000638754 CSB-PGBD3P0DP91 1061 aa11.42□□□□□ -0.58
KCNMA1-244ENST00000638754 CALD1Q05682 793 aaKnown RBP11.42□□□□□ -0.58
KCNMA1-244ENST00000638754 NGDNQ8NEJ9 315 aaKnown RBP11.42□□□□□ -0.58
KCNMA1-244ENST00000638754 ZNF644Q9H582 1327 aaPredicted RBP11.41□□□□□ -0.58
KCNMA1-244ENST00000638754 VGFO15240 615 aaPredicted RBP11.4□□□□□ -0.58
KCNMA1-244ENST00000638754 KCNJ4P48050 445 aa11.4□□□□□ -0.58
KCNMA1-244ENST00000638754 MYOM3Q5VTT5 1437 aa11.39□□□□□ -0.59
KCNMA1-244ENST00000638754 FGD1P98174 961 aa11.39□□□□□ -0.59
KCNMA1-244ENST00000638754 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.38□□□□□ -0.59
KCNMA1-244ENST00000638754 GOLGA2Q08379 1002 aa11.38□□□□□ -0.59
KCNMA1-244ENST00000638754 PANK3Q9H999 370 aa11.37□□□□□ -0.59
KCNMA1-244ENST00000638754 FGD6Q6ZV73 1430 aa11.37□□□□□ -0.59
KCNMA1-244ENST00000638754 UACAQ9BZF9 1416 aa11.37□□□□□ -0.59
KCNMA1-244ENST00000638754 CFTRP13569 1480 aa11.37□□□□□ -0.59
KCNMA1-244ENST00000638754 TPRNQ4KMQ1 711 aa11.37□□□□□ -0.59
KCNMA1-244ENST00000638754 CCDC146Q8IYE0 955 aa11.37□□□□□ -0.59
KCNMA1-244ENST00000638754 APBB1O00213 710 aa11.36□□□□□ -0.59
KCNMA1-244ENST00000638754 ZRSR1Q15695 479 aaKnown RBP11.36□□□□□ -0.59
KCNMA1-244ENST00000638754 HSP90AB1P08238 724 aaKnown RBP11.35□□□□□ -0.59
KCNMA1-244ENST00000638754 AMPHP49418 695 aa11.35□□□□□ -0.59
KCNMA1-244ENST00000638754 PHLDB1Q86UU1 1377 aa11.35□□□□□ -0.59
KCNMA1-244ENST00000638754 ITPRIPQ8IWB1 547 aa11.35□□□□□ -0.59
KCNMA1-244ENST00000638754 TRIM44Q96DX7 344 aaPredicted RBP11.35□□□□□ -0.59
KCNMA1-244ENST00000638754 FAM69CQ0P6D2 419 aa11.35□□□□□ -0.59
KCNMA1-244ENST00000638754 ERICH6BQ5W0A0 696 aa11.35□□□□□ -0.59
KCNMA1-244ENST00000638754 USP47Q96K76 1375 aa11.35□□□□□ -0.59
KCNMA1-244ENST00000638754 KIF15Q9NS87 1388 aa11.35□□□□□ -0.59
KCNMA1-244ENST00000638754 ZNF330Q9Y3S2 320 aaPredicted RBP11.34□□□□□ -0.59
KCNMA1-244ENST00000638754 GRIN2BQ13224 1484 aa11.34□□□□□ -0.59
KCNMA1-244ENST00000638754 STK31Q9BXU1 1019 aa11.34□□□□□ -0.59
KCNMA1-244ENST00000638754 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
KCNMA1-244ENST00000638754 CHMP4AQ9BY43 222 aa11.34□□□□□ -0.59
KCNMA1-244ENST00000638754 SMC4Q9NTJ3 1288 aa11.34□□□□□ -0.59
KCNMA1-244ENST00000638754 PDE3BQ13370 1112 aa11.33□□□□□ -0.6
KCNMA1-244ENST00000638754 LTV1Q96GA3 475 aaPredicted RBP11.33□□□□□ -0.6
KCNMA1-244ENST00000638754 NOP58Q9Y2X3 529 aaKnown RBP11.33□□□□□ -0.6
KCNMA1-244ENST00000638754 KIF21BO75037 1637 aa11.33□□□□□ -0.6
KCNMA1-244ENST00000638754 NESP48681 1621 aa11.33□□□□□ -0.6
KCNMA1-244ENST00000638754 MYBBP1AQ9BQG0 1328 aaKnown RBP11.33□□□□□ -0.6
KCNMA1-244ENST00000638754 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
KCNMA1-244ENST00000638754 PRKRIP1Q9H875 184 aaPredicted RBP11.33□□□□□ -0.6
KCNMA1-244ENST00000638754 RWDD1Q9H446 243 aaPredicted RBP11.33□□□□□ -0.6
KCNMA1-244ENST00000638754 EVC2Q86UK5 1308 aa11.32□□□□□ -0.6
KCNMA1-244ENST00000638754 NAP1L2Q9ULW6 460 aaPredicted RBP11.32□□□□□ -0.6
KCNMA1-244ENST00000638754 MINK1Q8N4C8 1332 aaPredicted RBP11.32□□□□□ -0.6
KCNMA1-244ENST00000638754 LRRC9Q6ZRR7 1453 aa11.32□□□□□ -0.6
KCNMA1-244ENST00000638754 CDK11BP21127 795 aaKnown RBP11.31□□□□□ -0.6
KCNMA1-244ENST00000638754 CASKIN1Q8WXD9 1431 aa11.31□□□□□ -0.6
KCNMA1-244ENST00000638754 LMOD3Q0VAK6 560 aa11.31□□□□□ -0.6
KCNMA1-244ENST00000638754 HSCBQ8IWL3 235 aa11.31□□□□□ -0.6
KCNMA1-244ENST00000638754 CGNL1Q0VF96 1302 aa11.3□□□□□ -0.6
KCNMA1-244ENST00000638754 AFAP1Q8N556 730 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms