RNA–Protein interactions for RNA: ENST00000638754.1

KCNMA1-244, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 5,069 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-244ENST00000638754 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
KCNMA1-244ENST00000638754 NISCHQ9Y2I1 1504 aa15.55■□□□□ 0.08
KCNMA1-244ENST00000638754 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
KCNMA1-244ENST00000638754 SHROOM4Q9ULL8 1493 aa14.85□□□□□ -0.03
KCNMA1-244ENST00000638754 EHMT2Q96KQ7 1210 aa14.43□□□□□ -0.1
KCNMA1-244ENST00000638754 FAM9AQ8IZU1 332 aaPredicted RBP14.15□□□□□ -0.14
KCNMA1-244ENST00000638754 APLP2Q06481 763 aa14.11□□□□□ -0.15
KCNMA1-244ENST00000638754 TRIM41Q8WV44 630 aa13.93□□□□□ -0.18
KCNMA1-244ENST00000638754 TTBK1Q5TCY1 1321 aaPredicted RBP13.91□□□□□ -0.18
KCNMA1-244ENST00000638754 RANGAP1P46060 587 aaPredicted RBP13.85□□□□□ -0.19
KCNMA1-244ENST00000638754 PCGF6Q9BYE7 350 aa13.83□□□□□ -0.2
KCNMA1-244ENST00000638754 UBTFP17480 764 aaKnown RBP13.73□□□□□ -0.21
KCNMA1-244ENST00000638754 ATP1B4Q9UN42 357 aaPredicted RBP13.7□□□□□ -0.22
KCNMA1-244ENST00000638754 PELP1Q8IZL8 1130 aaKnown RBP13.59□□□□□ -0.23
KCNMA1-244ENST00000638754 CCER1Q8TC90 406 aaPredicted RBP13.57□□□□□ -0.24
KCNMA1-244ENST00000638754 ZEB1P37275 1124 aaPredicted RBP13.51□□□□□ -0.25
KCNMA1-244ENST00000638754 PPARGC1BQ86YN6 1023 aaKnown RBP13.45□□□□□ -0.26
KCNMA1-244ENST00000638754 ABCC9O60706 1549 aa13.44□□□□□ -0.26
KCNMA1-244ENST00000638754 CHIC1Q5VXU3 224 aa13.41□□□□□ -0.26
KCNMA1-244ENST00000638754 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
KCNMA1-244ENST00000638754 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
KCNMA1-244ENST00000638754 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
KCNMA1-244ENST00000638754 TRIM26Q12899 539 aaPredicted RBP13.3□□□□□ -0.28
KCNMA1-244ENST00000638754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
KCNMA1-244ENST00000638754 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
KCNMA1-244ENST00000638754 ITGAEP38570 1179 aa13.24□□□□□ -0.29
KCNMA1-244ENST00000638754 MYT1LQ9UL68 1186 aa13.15□□□□□ -0.3
KCNMA1-244ENST00000638754 YTHDC1Q96MU7 727 aaKnown RBP13.12□□□□□ -0.31
KCNMA1-244ENST00000638754 NEFLP07196 543 aa13.06□□□□□ -0.32
KCNMA1-244ENST00000638754 HRCP23327 699 aa13.05□□□□□ -0.32
KCNMA1-244ENST00000638754 POLR3GLQ9BT43 218 aa13□□□□□ -0.33
KCNMA1-244ENST00000638754 ERICH6Q7L0X2 663 aa12.98□□□□□ -0.33
KCNMA1-244ENST00000638754 FAM50AQ14320 339 aaKnown RBP12.94□□□□□ -0.34
KCNMA1-244ENST00000638754 FBLN2P98095 1184 aa12.89□□□□□ -0.35
KCNMA1-244ENST00000638754 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
KCNMA1-244ENST00000638754 ZCCHC6Q5VYS8 1495 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-244ENST00000638754 SCRIBQ14160 1630 aa12.85□□□□□ -0.35
KCNMA1-244ENST00000638754 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
KCNMA1-244ENST00000638754 TRIM52Q96A61 297 aa12.83□□□□□ -0.36
KCNMA1-244ENST00000638754 P3H3Q8IVL6 736 aa12.77□□□□□ -0.37
KCNMA1-244ENST00000638754 NEUROD1Q13562 356 aa12.75□□□□□ -0.37
KCNMA1-244ENST00000638754 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
KCNMA1-244ENST00000638754 DIEXFQ68CQ4 756 aaKnown RBP12.73□□□□□ -0.37
KCNMA1-244ENST00000638754 ARID3CA6NKF2 412 aa12.71□□□□□ -0.37
KCNMA1-244ENST00000638754 CCDC180Q9P1Z9 1646 aa12.69□□□□□ -0.38
KCNMA1-244ENST00000638754 ZNF326Q5BKZ1 582 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-244ENST00000638754 CDK11AQ9UQ88 783 aaPredicted RBP12.6□□□□□ -0.39
KCNMA1-244ENST00000638754 ZNF777Q9ULD5 760 aaPredicted RBP12.59□□□□□ -0.39
KCNMA1-244ENST00000638754 DAXXQ9UER7 740 aaPredicted RBP12.58□□□□□ -0.4
KCNMA1-244ENST00000638754 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.4
KCNMA1-244ENST00000638754 ANP32CO43423 234 aa12.52□□□□□ -0.4
KCNMA1-244ENST00000638754 ZNF316A6NFI3 1004 aaPredicted RBP12.5□□□□□ -0.41
KCNMA1-244ENST00000638754 RSF1Q96T23 1441 aaPredicted RBP12.46□□□□□ -0.41
KCNMA1-244ENST00000638754 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.42
KCNMA1-244ENST00000638754 NPM1P06748 294 aaKnown RBP eCLIP12.43□□□□□ -0.42
KCNMA1-244ENST00000638754 BCANQ96GW7 911 aa12.43□□□□□ -0.42
KCNMA1-244ENST00000638754 NACADO15069 1562 aa12.42□□□□□ -0.42
KCNMA1-244ENST00000638754 CHMP7Q8WUX9 453 aaPredicted RBP12.4□□□□□ -0.42
KCNMA1-244ENST00000638754 DCAF1Q9Y4B6 1507 aa12.38□□□□□ -0.43
KCNMA1-244ENST00000638754 CHIC2Q9UKJ5 165 aa12.37□□□□□ -0.43
KCNMA1-244ENST00000638754 TONSLQ96HA7 1378 aa12.37□□□□□ -0.43
KCNMA1-244ENST00000638754 ESF1Q9H501 851 aaKnown RBP12.37□□□□□ -0.43
KCNMA1-244ENST00000638754 CLIP1P30622 1438 aa12.35□□□□□ -0.43
KCNMA1-244ENST00000638754 MTUS2Q5JR59 1369 aa12.35□□□□□ -0.43
KCNMA1-244ENST00000638754 CHGAP10645 457 aaKnown RBP12.34□□□□□ -0.43
KCNMA1-244ENST00000638754 GTF3C3Q9Y5Q9 886 aa12.34□□□□□ -0.43
KCNMA1-244ENST00000638754 BAZ1BQ9UIG0 1483 aaKnown RBP12.34□□□□□ -0.43
KCNMA1-244ENST00000638754 TSPY4P0CV99 314 aa12.32□□□□□ -0.44
KCNMA1-244ENST00000638754 TSPY10P0CW01 314 aa12.32□□□□□ -0.44
KCNMA1-244ENST00000638754 MYT1Q01538 1121 aa12.32□□□□□ -0.44
KCNMA1-244ENST00000638754 WRNQ14191 1432 aaPredicted RBP eCLIP12.32□□□□□ -0.44
KCNMA1-244ENST00000638754 NEFMP07197 916 aa12.31□□□□□ -0.44
KCNMA1-244ENST00000638754 EEA1Q15075 1411 aa12.3□□□□□ -0.44
KCNMA1-244ENST00000638754 STAG3Q9UJ98 1225 aa12.3□□□□□ -0.44
KCNMA1-244ENST00000638754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.44
KCNMA1-244ENST00000638754 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
KCNMA1-244ENST00000638754 CANXP27824 592 aaKnown RBP12.26□□□□□ -0.45
KCNMA1-244ENST00000638754 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
KCNMA1-244ENST00000638754 GOLGA3Q08378 1498 aa12.25□□□□□ -0.45
KCNMA1-244ENST00000638754 DDX10Q13206 875 aaKnown RBP12.25□□□□□ -0.45
KCNMA1-244ENST00000638754 PLPPR3Q6T4P5 718 aa12.25□□□□□ -0.45
KCNMA1-244ENST00000638754 CECR2Q9BXF3 1484 aa12.24□□□□□ -0.45
KCNMA1-244ENST00000638754 RTL5Q5HYW3 569 aaPredicted RBP12.24□□□□□ -0.45
KCNMA1-244ENST00000638754 CEP162Q5TB80 1403 aa12.23□□□□□ -0.45
KCNMA1-244ENST00000638754 BAZ1AQ9NRL2 1556 aaPredicted RBP12.23□□□□□ -0.45
KCNMA1-244ENST00000638754 KIF27Q86VH2 1401 aa12.23□□□□□ -0.45
KCNMA1-244ENST00000638754 PLEKHD1A6NEE1 506 aa12.21□□□□□ -0.45
KCNMA1-244ENST00000638754 MYO15BQ96JP2 1530 aa12.21□□□□□ -0.45
KCNMA1-244ENST00000638754 KCNH8Q96L42 1107 aa12.2□□□□□ -0.46
KCNMA1-244ENST00000638754 RRP7BPQ9NSQ0 103 aa12.2□□□□□ -0.46
KCNMA1-244ENST00000638754 BCL11AQ9H165 835 aa12.2□□□□□ -0.46
KCNMA1-244ENST00000638754 ACIN1Q9UKV3 1341 aaKnown RBP12.19□□□□□ -0.46
KCNMA1-244ENST00000638754 KDM2AQ9Y2K7 1162 aa12.19□□□□□ -0.46
KCNMA1-244ENST00000638754 HNRNPUQ00839 825 aaKnown RBP eCLIP12.16□□□□□ -0.46
KCNMA1-244ENST00000638754 TNIKQ9UKE5 1360 aa12.16□□□□□ -0.46
KCNMA1-244ENST00000638754 FAM9BQ8IZU0 186 aa12.15□□□□□ -0.46
KCNMA1-244ENST00000638754 CEP164Q9UPV0 1460 aa12.15□□□□□ -0.46
KCNMA1-244ENST00000638754 CFDP1Q9UEE9 299 aaPredicted RBP12.12□□□□□ -0.47
KCNMA1-244ENST00000638754 TMC1Q8TDI8 760 aa12.11□□□□□ -0.47
KCNMA1-244ENST00000638754 HIRIP3Q9BW71 556 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms