RNA–Protein interactions for RNA: ENST00000638306.1

KCNMA1-232, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-232ENST00000638306 GSE1Q14687 1217 aa17.39■□□□□ 0.37
KCNMA1-232ENST00000638306 AQRO60306 1485 aaKnown RBP eCLIP17.39■□□□□ 0.37
KCNMA1-232ENST00000638306 CCDC18Q5T9S5 1454 aa17.38■□□□□ 0.37
KCNMA1-232ENST00000638306 FRAT1Q92837 279 aaPredicted RBP17.37■□□□□ 0.37
KCNMA1-232ENST00000638306 CANXP27824 592 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-232ENST00000638306 CFTRP13569 1480 aa17.35■□□□□ 0.37
KCNMA1-232ENST00000638306 PLIN1O60240 522 aa17.35■□□□□ 0.37
KCNMA1-232ENST00000638306 ERICH3Q5RHP9 1530 aa17.35■□□□□ 0.37
KCNMA1-232ENST00000638306 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
KCNMA1-232ENST00000638306 PPM1GO15355 546 aaPredicted RBP17.34■□□□□ 0.37
KCNMA1-232ENST00000638306 FMN1Q68DA7 1419 aa17.34■□□□□ 0.37
KCNMA1-232ENST00000638306 JPH4Q96JJ6 628 aa17.34■□□□□ 0.37
KCNMA1-232ENST00000638306 PDE4AP27815 886 aa17.34■□□□□ 0.37
KCNMA1-232ENST00000638306 RGS3P49796 1198 aa17.33■□□□□ 0.36
KCNMA1-232ENST00000638306 NBPF8Q3BBV2 869 aa17.33■□□□□ 0.36
KCNMA1-232ENST00000638306 SLC4A3P48751 1232 aa17.32■□□□□ 0.36
KCNMA1-232ENST00000638306 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
KCNMA1-232ENST00000638306 CNTLNQ9NXG0 1405 aa17.32■□□□□ 0.36
KCNMA1-232ENST00000638306 NPM1P06748 294 aaKnown RBP eCLIP17.32■□□□□ 0.36
KCNMA1-232ENST00000638306 NUDCQ9Y266 331 aa17.31■□□□□ 0.36
KCNMA1-232ENST00000638306 SMG6Q86US8 1419 aaKnown RBP17.3■□□□□ 0.36
KCNMA1-232ENST00000638306 TNNT2P45379 298 aaPredicted RBP17.3■□□□□ 0.36
KCNMA1-232ENST00000638306 TIAM1Q13009 1591 aa17.3■□□□□ 0.36
KCNMA1-232ENST00000638306 NFKBIBQ15653 356 aa17.3■□□□□ 0.36
KCNMA1-232ENST00000638306 SKAP1Q86WV1 359 aa17.3■□□□□ 0.36
KCNMA1-232ENST00000638306 UNC13AQ9UPW8 1703 aa17.3■□□□□ 0.36
KCNMA1-232ENST00000638306 FGD6Q6ZV73 1430 aa17.29■□□□□ 0.36
KCNMA1-232ENST00000638306 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
KCNMA1-232ENST00000638306 ST20-MTHFSA0A0A6YYL1 179 aa17.28■□□□□ 0.36
KCNMA1-232ENST00000638306 RNF123Q5XPI4 1314 aa17.28■□□□□ 0.36
KCNMA1-232ENST00000638306 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
KCNMA1-232ENST00000638306 BACH2Q9BYV9 841 aa17.27■□□□□ 0.35
KCNMA1-232ENST00000638306 KIF7Q2M1P5 1343 aa17.27■□□□□ 0.35
KCNMA1-232ENST00000638306 KDM5BQ9UGL1 1544 aa17.26■□□□□ 0.35
KCNMA1-232ENST00000638306 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
KCNMA1-232ENST00000638306 EXOC6Q8TAG9 804 aa17.25■□□□□ 0.35
KCNMA1-232ENST00000638306 NUP155O75694 1391 aa17.25■□□□□ 0.35
KCNMA1-232ENST00000638306 NCOA2Q15596 1464 aa17.24■□□□□ 0.35
KCNMA1-232ENST00000638306 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
KCNMA1-232ENST00000638306 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
KCNMA1-232ENST00000638306 TCERG1O14776 1098 aaKnown RBP17.22■□□□□ 0.35
KCNMA1-232ENST00000638306 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
KCNMA1-232ENST00000638306 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.35
KCNMA1-232ENST00000638306 CCDC7Q96M83 1385 aa17.2■□□□□ 0.34
KCNMA1-232ENST00000638306 SLC24A1O60721 1099 aa17.2■□□□□ 0.34
KCNMA1-232ENST00000638306 CC2D2AQ9P2K1 1620 aa17.2■□□□□ 0.34
KCNMA1-232ENST00000638306 SAFB2Q14151 953 aaKnown RBP eCLIP17.2■□□□□ 0.34
KCNMA1-232ENST00000638306 ZMYND15Q9H091 742 aa17.2■□□□□ 0.34
KCNMA1-232ENST00000638306 FAM43AQ8N2R8 423 aa17.19■□□□□ 0.34
KCNMA1-232ENST00000638306 POLA1P09884 1462 aaPredicted RBP17.18■□□□□ 0.34
KCNMA1-232ENST00000638306 RCAN3Q9UKA8 241 aa17.18■□□□□ 0.34
KCNMA1-232ENST00000638306 UACAQ9BZF9 1416 aa17.17■□□□□ 0.34
KCNMA1-232ENST00000638306 CDCA7LQ96GN5 454 aa17.16■□□□□ 0.34
KCNMA1-232ENST00000638306 NUTM2DQ5VT03 806 aaPredicted RBP17.16■□□□□ 0.34
KCNMA1-232ENST00000638306 FRAT2O75474 233 aaPredicted RBP17.16■□□□□ 0.34
KCNMA1-232ENST00000638306 PTPRKQ15262 1439 aa17.15■□□□□ 0.34
KCNMA1-232ENST00000638306 GGT6Q6P531 493 aa17.15■□□□□ 0.34
KCNMA1-232ENST00000638306 CCDC146Q8IYE0 955 aa17.14■□□□□ 0.33
KCNMA1-232ENST00000638306 RRAGDQ9NQL2 400 aaPredicted RBP17.13■□□□□ 0.33
KCNMA1-232ENST00000638306 NCOA1Q15788 1441 aa17.13■□□□□ 0.33
KCNMA1-232ENST00000638306 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
KCNMA1-232ENST00000638306 RRP1P56182 461 aaKnown RBP17.12■□□□□ 0.33
KCNMA1-232ENST00000638306 USP47Q96K76 1375 aa17.12■□□□□ 0.33
KCNMA1-232ENST00000638306 SPRYD3Q8NCJ5 442 aa17.12■□□□□ 0.33
KCNMA1-232ENST00000638306 MYOM3Q5VTT5 1437 aa17.12■□□□□ 0.33
KCNMA1-232ENST00000638306 DDRGK1Q96HY6 314 aa17.11■□□□□ 0.33
KCNMA1-232ENST00000638306 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
KCNMA1-232ENST00000638306 KNSTRNQ9Y448 316 aa17.1■□□□□ 0.33
KCNMA1-232ENST00000638306 MS4A1P11836 297 aa17.09■□□□□ 0.33
KCNMA1-232ENST00000638306 MLECQ14165 292 aa17.09■□□□□ 0.33
KCNMA1-232ENST00000638306 NAIPQ13075 1403 aa17.09■□□□□ 0.33
KCNMA1-232ENST00000638306 PCF11O94913 1555 aaKnown RBP17.09■□□□□ 0.33
KCNMA1-232ENST00000638306 GLIPR1L2Q4G1C9 344 aa17.08■□□□□ 0.33
KCNMA1-232ENST00000638306 ROCK2O75116 1388 aaKnown RBP17.08■□□□□ 0.32
KCNMA1-232ENST00000638306 CASKIN1Q8WXD9 1431 aa17.07■□□□□ 0.32
KCNMA1-232ENST00000638306 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
KCNMA1-232ENST00000638306 CARMIL2Q6F5E8 1435 aa17.06■□□□□ 0.32
KCNMA1-232ENST00000638306 KIF3BO15066 747 aa17.05■□□□□ 0.32
KCNMA1-232ENST00000638306 PTPN23Q9H3S7 1636 aa17.04■□□□□ 0.32
KCNMA1-232ENST00000638306 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
KCNMA1-232ENST00000638306 CRBNQ96SW2 442 aa17.04■□□□□ 0.32
KCNMA1-232ENST00000638306 PANK3Q9H999 370 aa17.04■□□□□ 0.32
KCNMA1-232ENST00000638306 ESF1Q9H501 851 aaKnown RBP17.04■□□□□ 0.32
KCNMA1-232ENST00000638306 HMGXB3Q12766 1538 aa17.04■□□□□ 0.32
KCNMA1-232ENST00000638306 HFM1A2PYH4 1435 aa17.03■□□□□ 0.32
KCNMA1-232ENST00000638306 ANKRD30AQ9BXX3 1397 aa17.03■□□□□ 0.32
KCNMA1-232ENST00000638306 STK26Q9P289 416 aa17.02■□□□□ 0.32
KCNMA1-232ENST00000638306 POGKQ9P215 609 aa17.02■□□□□ 0.31
KCNMA1-232ENST00000638306 NAP1L5Q96NT1 182 aaPredicted RBP17.01■□□□□ 0.31
KCNMA1-232ENST00000638306 PNISRQ8TF01 805 aaKnown RBP17.01■□□□□ 0.31
KCNMA1-232ENST00000638306 SLKQ9H2G2 1235 aaPredicted RBP17■□□□□ 0.31
KCNMA1-232ENST00000638306 CFAP43Q8NDM7 1665 aa16.99■□□□□ 0.31
KCNMA1-232ENST00000638306 DHX29Q7Z478 1369 aaKnown RBP16.99■□□□□ 0.31
KCNMA1-232ENST00000638306 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
KCNMA1-232ENST00000638306 RRP7AQ9Y3A4 280 aaKnown RBP16.99■□□□□ 0.31
KCNMA1-232ENST00000638306 PRG4Q92954 1404 aaPredicted RBP16.99■□□□□ 0.31
KCNMA1-232ENST00000638306 CLUAP1Q96AJ1 413 aa16.99■□□□□ 0.31
KCNMA1-232ENST00000638306 KTN1Q86UP2 1357 aaKnown RBP16.98■□□□□ 0.31
KCNMA1-232ENST00000638306 PODXL2Q9NZ53 605 aa16.98■□□□□ 0.31
KCNMA1-232ENST00000638306 CDK13Q14004 1512 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms