RNA–Protein interactions for RNA: ENST00000638306.1

KCNMA1-232, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-232ENST00000638306 NISCHQ9Y2I1 1504 aa23.9■■□□□ 1.42
KCNMA1-232ENST00000638306 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
KCNMA1-232ENST00000638306 SHROOM4Q9ULL8 1493 aa22.67■■□□□ 1.22
KCNMA1-232ENST00000638306 SUPT5HO00267 1087 aaKnown RBP22.61■■□□□ 1.21
KCNMA1-232ENST00000638306 HRCP23327 699 aa22.05■■□□□ 1.12
KCNMA1-232ENST00000638306 PPARGC1BQ86YN6 1023 aaKnown RBP21.82■■□□□ 1.08
KCNMA1-232ENST00000638306 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
KCNMA1-232ENST00000638306 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.05
KCNMA1-232ENST00000638306 PELP1Q8IZL8 1130 aaKnown RBP21.54■■□□□ 1.04
KCNMA1-232ENST00000638306 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
KCNMA1-232ENST00000638306 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
KCNMA1-232ENST00000638306 SCAF1Q9H7N4 1312 aaKnown RBP21.15■□□□□ 0.98
KCNMA1-232ENST00000638306 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
KCNMA1-232ENST00000638306 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
KCNMA1-232ENST00000638306 TTBK1Q5TCY1 1321 aaPredicted RBP20.98■□□□□ 0.95
KCNMA1-232ENST00000638306 MYT1Q01538 1121 aa20.7■□□□□ 0.9
KCNMA1-232ENST00000638306 DCAF1Q9Y4B6 1507 aa20.65■□□□□ 0.9
KCNMA1-232ENST00000638306 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
KCNMA1-232ENST00000638306 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
KCNMA1-232ENST00000638306 CCDC180Q9P1Z9 1646 aa20.46■□□□□ 0.87
KCNMA1-232ENST00000638306 NEUROD1Q13562 356 aa20.45■□□□□ 0.86
KCNMA1-232ENST00000638306 RANGAP1P46060 587 aaPredicted RBP20.45■□□□□ 0.86
KCNMA1-232ENST00000638306 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
KCNMA1-232ENST00000638306 ACIN1Q9UKV3 1341 aaKnown RBP20.43■□□□□ 0.86
KCNMA1-232ENST00000638306 GTF3C3Q9Y5Q9 886 aa20.36■□□□□ 0.85
KCNMA1-232ENST00000638306 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.83
KCNMA1-232ENST00000638306 ABCC9O60706 1549 aa20.22■□□□□ 0.83
KCNMA1-232ENST00000638306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
KCNMA1-232ENST00000638306 YTHDC1Q96MU7 727 aaKnown RBP20.12■□□□□ 0.81
KCNMA1-232ENST00000638306 PABPN1Q86U42 306 aaKnown RBP eCLIP20.05■□□□□ 0.8
KCNMA1-232ENST00000638306 CENPBP07199 599 aaPredicted RBP20.04■□□□□ 0.8
KCNMA1-232ENST00000638306 UBTFP17480 764 aaKnown RBP20.02■□□□□ 0.8
KCNMA1-232ENST00000638306 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
KCNMA1-232ENST00000638306 DIEXFQ68CQ4 756 aaKnown RBP19.93■□□□□ 0.78
KCNMA1-232ENST00000638306 APLP2Q06481 763 aa19.85■□□□□ 0.77
KCNMA1-232ENST00000638306 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
KCNMA1-232ENST00000638306 ATP1B4Q9UN42 357 aaPredicted RBP19.72■□□□□ 0.75
KCNMA1-232ENST00000638306 BCL11AQ9H165 835 aa19.67■□□□□ 0.74
KCNMA1-232ENST00000638306 SCRIBQ14160 1630 aa19.63■□□□□ 0.73
KCNMA1-232ENST00000638306 ITGAEP38570 1179 aa19.55■□□□□ 0.72
KCNMA1-232ENST00000638306 MIER1Q8N108 512 aa19.46■□□□□ 0.71
KCNMA1-232ENST00000638306 ZNF316A6NFI3 1004 aaPredicted RBP19.42■□□□□ 0.7
KCNMA1-232ENST00000638306 ANP32EQ9BTT0 268 aa19.41■□□□□ 0.7
KCNMA1-232ENST00000638306 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.68
KCNMA1-232ENST00000638306 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
KCNMA1-232ENST00000638306 TSHZ2Q9NRE2 1034 aa19.28■□□□□ 0.68
KCNMA1-232ENST00000638306 SUPT16HQ9Y5B9 1047 aaKnown RBP19.26■□□□□ 0.67
KCNMA1-232ENST00000638306 CECR2Q9BXF3 1484 aa19.16■□□□□ 0.66
KCNMA1-232ENST00000638306 BCANQ96GW7 911 aa19.13■□□□□ 0.65
KCNMA1-232ENST00000638306 PRKCSHP14314 528 aaPredicted RBP19.09■□□□□ 0.65
KCNMA1-232ENST00000638306 RB1CC1Q8TDY2 1594 aa19.08■□□□□ 0.64
KCNMA1-232ENST00000638306 CNGB1Q14028 1251 aaPredicted RBP19.07■□□□□ 0.64
KCNMA1-232ENST00000638306 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
KCNMA1-232ENST00000638306 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
KCNMA1-232ENST00000638306 CLSPNQ9HAW4 1339 aa18.9■□□□□ 0.62
KCNMA1-232ENST00000638306 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.61
KCNMA1-232ENST00000638306 HIRIP3Q9BW71 556 aaPredicted RBP18.87■□□□□ 0.61
KCNMA1-232ENST00000638306 SOGA1O94964 1423 aa18.86■□□□□ 0.61
KCNMA1-232ENST00000638306 CEP162Q5TB80 1403 aa18.85■□□□□ 0.61
KCNMA1-232ENST00000638306 MROH2BQ7Z745 1585 aa18.82■□□□□ 0.6
KCNMA1-232ENST00000638306 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
KCNMA1-232ENST00000638306 RBM19Q9Y4C8 960 aaKnown RBP18.78■□□□□ 0.6
KCNMA1-232ENST00000638306 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
KCNMA1-232ENST00000638306 NEFLP07196 543 aa18.76■□□□□ 0.59
KCNMA1-232ENST00000638306 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
KCNMA1-232ENST00000638306 POLR3GLQ9BT43 218 aa18.74■□□□□ 0.59
KCNMA1-232ENST00000638306 KCNH8Q96L42 1107 aa18.73■□□□□ 0.59
KCNMA1-232ENST00000638306 FKBP8Q14318 412 aa18.72■□□□□ 0.59
KCNMA1-232ENST00000638306 MSH5O43196 834 aa18.71■□□□□ 0.59
KCNMA1-232ENST00000638306 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
KCNMA1-232ENST00000638306 WIZO95785 1651 aa18.65■□□□□ 0.58
KCNMA1-232ENST00000638306 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.58
KCNMA1-232ENST00000638306 NACADO15069 1562 aa18.64■□□□□ 0.57
KCNMA1-232ENST00000638306 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
KCNMA1-232ENST00000638306 FBLN2P98095 1184 aa18.62■□□□□ 0.57
KCNMA1-232ENST00000638306 CLIP1P30622 1438 aa18.61■□□□□ 0.57
KCNMA1-232ENST00000638306 ERICH6Q7L0X2 663 aa18.61■□□□□ 0.57
KCNMA1-232ENST00000638306 SENP3-EIF4A1A0A087X0R7 540 aa18.55■□□□□ 0.56
KCNMA1-232ENST00000638306 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
KCNMA1-232ENST00000638306 IRX6P78412 446 aaPredicted RBP18.52■□□□□ 0.56
KCNMA1-232ENST00000638306 ANO8Q9HCE9 1232 aaPredicted RBP18.51■□□□□ 0.55
KCNMA1-232ENST00000638306 KANK4Q5T7N3 995 aaPredicted RBP18.5■□□□□ 0.55
KCNMA1-232ENST00000638306 SIN3AQ96ST3 1273 aa18.48■□□□□ 0.55
KCNMA1-232ENST00000638306 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
KCNMA1-232ENST00000638306 GOLGA3Q08378 1498 aa18.43■□□□□ 0.54
KCNMA1-232ENST00000638306 DEKP35659 375 aaKnown RBP18.42■□□□□ 0.54
KCNMA1-232ENST00000638306 ZNF326Q5BKZ1 582 aaKnown RBP18.4■□□□□ 0.54
KCNMA1-232ENST00000638306 BAZ1BQ9UIG0 1483 aaKnown RBP18.4■□□□□ 0.54
KCNMA1-232ENST00000638306 ANP32CO43423 234 aa18.39■□□□□ 0.53
KCNMA1-232ENST00000638306 CHIC2Q9UKJ5 165 aa18.39■□□□□ 0.53
KCNMA1-232ENST00000638306 MYT1LQ9UL68 1186 aa18.38■□□□□ 0.53
KCNMA1-232ENST00000638306 DHX57Q6P158 1386 aaKnown RBP18.37■□□□□ 0.53
KCNMA1-232ENST00000638306 FANCIQ9NVI1 1328 aa18.32■□□□□ 0.52
KCNMA1-232ENST00000638306 ZNF777Q9ULD5 760 aaPredicted RBP18.32■□□□□ 0.52
KCNMA1-232ENST00000638306 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
KCNMA1-232ENST00000638306 SALL2Q9Y467 1007 aaPredicted RBP18.29■□□□□ 0.52
KCNMA1-232ENST00000638306 HNRNPUQ00839 825 aaKnown RBP eCLIP18.29■□□□□ 0.52
KCNMA1-232ENST00000638306 CCDC136Q96JN2 1154 aa18.26■□□□□ 0.51
KCNMA1-232ENST00000638306 FAM9BQ8IZU0 186 aa18.23■□□□□ 0.51
KCNMA1-232ENST00000638306 CEP164Q9UPV0 1460 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms