RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 FGD6Q6ZV73 1430 aa12.37□□□□□ -0.43
TARDBP-219ENST00000617757 GLI2P10070 1586 aa12.36□□□□□ -0.43
TARDBP-219ENST00000617757 MIA2Q96PC5 1412 aa12.36□□□□□ -0.43
TARDBP-219ENST00000617757 MAP3K4Q9Y6R4 1608 aa12.35□□□□□ -0.43
TARDBP-219ENST00000617757 PPP6R1Q9UPN7 881 aa12.34□□□□□ -0.43
TARDBP-219ENST00000617757 TCOF1Q13428 1488 aaKnown RBP12.34□□□□□ -0.43
TARDBP-219ENST00000617757 ARAP3Q8WWN8 1544 aa12.33□□□□□ -0.44
TARDBP-219ENST00000617757 PLCH2O75038 1416 aa12.33□□□□□ -0.44
TARDBP-219ENST00000617757 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
TARDBP-219ENST00000617757 SAMD9LQ8IVG5 1584 aa12.32□□□□□ -0.44
TARDBP-219ENST00000617757 MSH5O43196 834 aa12.32□□□□□ -0.44
TARDBP-219ENST00000617757 TSPOAP1O95153 1857 aa12.31□□□□□ -0.44
TARDBP-219ENST00000617757 CFDP1Q9UEE9 299 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-219ENST00000617757 CAMSAP2Q08AD1 1489 aa12.31□□□□□ -0.44
TARDBP-219ENST00000617757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.3□□□□□ -0.44
TARDBP-219ENST00000617757 CFAP74Q9C0B2 1584 aa12.3□□□□□ -0.44
TARDBP-219ENST00000617757 CD109Q6YHK3 1445 aa12.29□□□□□ -0.44
TARDBP-219ENST00000617757 PPRC1Q5VV67 1664 aaKnown RBP12.29□□□□□ -0.44
TARDBP-219ENST00000617757 FAM50AQ14320 339 aaKnown RBP12.29□□□□□ -0.44
TARDBP-219ENST00000617757 PCGF6Q9BYE7 350 aa12.29□□□□□ -0.44
TARDBP-219ENST00000617757 CROCC2H7BZ55 1655 aa12.29□□□□□ -0.44
TARDBP-219ENST00000617757 DNMT1P26358 1616 aaKnown RBP12.28□□□□□ -0.44
TARDBP-219ENST00000617757 FAM69CQ0P6D2 419 aa12.27□□□□□ -0.45
TARDBP-219ENST00000617757 PIAS4Q8N2W9 510 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-219ENST00000617757 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-219ENST00000617757 ZNF644Q9H582 1327 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-219ENST00000617757 FANCAO15360 1455 aa12.27□□□□□ -0.45
TARDBP-219ENST00000617757 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
TARDBP-219ENST00000617757 ABCC1P33527 1531 aa12.26□□□□□ -0.45
TARDBP-219ENST00000617757 ARHGEF5Q12774 1597 aa12.26□□□□□ -0.45
TARDBP-219ENST00000617757 ADRA2BP18089 450 aa12.25□□□□□ -0.45
TARDBP-219ENST00000617757 PLEKHH2Q8IVE3 1493 aa12.24□□□□□ -0.45
TARDBP-219ENST00000617757 ADGBQ8N7X0 1667 aa12.24□□□□□ -0.45
TARDBP-219ENST00000617757 SYCP2Q9BX26 1530 aa12.24□□□□□ -0.45
TARDBP-219ENST00000617757 MBD5Q9P267 1494 aa12.23□□□□□ -0.45
TARDBP-219ENST00000617757 NEO1Q92859 1461 aa12.22□□□□□ -0.45
TARDBP-219ENST00000617757 DAPK1P53355 1430 aa12.22□□□□□ -0.45
TARDBP-219ENST00000617757 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
TARDBP-219ENST00000617757 KIAA1107Q9UPP5 1409 aa12.22□□□□□ -0.45
TARDBP-219ENST00000617757 ITGAEP38570 1179 aa12.22□□□□□ -0.45
TARDBP-219ENST00000617757 ARHGEF12Q9NZN5 1544 aa12.21□□□□□ -0.45
TARDBP-219ENST00000617757 ABCC5O15440 1437 aa12.21□□□□□ -0.45
TARDBP-219ENST00000617757 PTPRKQ15262 1439 aa12.21□□□□□ -0.45
TARDBP-219ENST00000617757 ADGRL1O94910 1474 aa12.21□□□□□ -0.46
TARDBP-219ENST00000617757 TEX14Q8IWB6 1497 aa12.21□□□□□ -0.46
TARDBP-219ENST00000617757 HNRNPMP52272 730 aaKnown RBP eCLIP12.2□□□□□ -0.46
TARDBP-219ENST00000617757 CCDC141Q6ZP82 1450 aa12.2□□□□□ -0.46
TARDBP-219ENST00000617757 MAST1Q9Y2H9 1570 aa12.19□□□□□ -0.46
TARDBP-219ENST00000617757 RICTORQ6R327 1708 aa12.19□□□□□ -0.46
TARDBP-219ENST00000617757 GCC2Q8IWJ2 1684 aa12.19□□□□□ -0.46
TARDBP-219ENST00000617757 RSPH4AQ5TD94 716 aa12.18□□□□□ -0.46
TARDBP-219ENST00000617757 SHANK2Q9UPX8 1470 aa12.18□□□□□ -0.46
TARDBP-219ENST00000617757 SCAPERQ9BY12 1400 aa12.18□□□□□ -0.46
TARDBP-219ENST00000617757 TRAPPC8Q9Y2L5 1435 aa12.17□□□□□ -0.46
TARDBP-219ENST00000617757 TRHP20396 242 aaPredicted RBP12.16□□□□□ -0.46
TARDBP-219ENST00000617757 ADGRL2O95490 1459 aa12.15□□□□□ -0.46
TARDBP-219ENST00000617757 C9orf84Q5VXU9 1444 aa12.15□□□□□ -0.46
TARDBP-219ENST00000617757 CHIC2Q9UKJ5 165 aa12.15□□□□□ -0.46
TARDBP-219ENST00000617757 KDM5CP41229 1560 aa12.14□□□□□ -0.47
TARDBP-219ENST00000617757 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
TARDBP-219ENST00000617757 TSPY4P0CV99 314 aa12.14□□□□□ -0.47
TARDBP-219ENST00000617757 TSPY10P0CW01 314 aa12.14□□□□□ -0.47
TARDBP-219ENST00000617757 KIDINS220Q9ULH0 1771 aa12.14□□□□□ -0.47
TARDBP-219ENST00000617757 ROCK1Q13464 1354 aa12.14□□□□□ -0.47
TARDBP-219ENST00000617757 ZNF518AQ6AHZ1 1483 aa12.14□□□□□ -0.47
TARDBP-219ENST00000617757 PLXNC1O60486 1568 aa12.13□□□□□ -0.47
TARDBP-219ENST00000617757 FRMPD1Q5SYB0 1578 aa12.13□□□□□ -0.47
TARDBP-219ENST00000617757 POGZQ7Z3K3 1410 aa12.13□□□□□ -0.47
TARDBP-219ENST00000617757 DENND4BO75064 1496 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-219ENST00000617757 NCOA1Q15788 1441 aa12.12□□□□□ -0.47
TARDBP-219ENST00000617757 ZFYVE16Q7Z3T8 1539 aa12.12□□□□□ -0.47
TARDBP-219ENST00000617757 AFAP1Q8N556 730 aa12.12□□□□□ -0.47
TARDBP-219ENST00000617757 HECW2Q9P2P5 1572 aa12.12□□□□□ -0.47
TARDBP-219ENST00000617757 HFM1A2PYH4 1435 aa12.11□□□□□ -0.47
TARDBP-219ENST00000617757 NAIPQ13075 1403 aa12.11□□□□□ -0.47
TARDBP-219ENST00000617757 ATP7AQ04656 1500 aa12.11□□□□□ -0.47
TARDBP-219ENST00000617757 RTEL1-TNFRSF6BF6WH68 1400 aa12.11□□□□□ -0.47
TARDBP-219ENST00000617757 SETD5Q9C0A6 1442 aa12.11□□□□□ -0.47
TARDBP-219ENST00000617757 ANKRD30AQ9BXX3 1397 aa12.1□□□□□ -0.47
TARDBP-219ENST00000617757 POTEDQ86YR6 584 aa12.1□□□□□ -0.47
TARDBP-219ENST00000617757 RRP7BPQ9NSQ0 103 aa12.1□□□□□ -0.47
TARDBP-219ENST00000617757 KDM6BO15054 1643 aa12.1□□□□□ -0.47
TARDBP-219ENST00000617757 SPAG9O60271 1321 aaKnown RBP12.1□□□□□ -0.47
TARDBP-219ENST00000617757 ZMYM4Q5VZL5 1548 aa12.09□□□□□ -0.47
TARDBP-219ENST00000617757 MLH3Q9UHC1 1453 aa12.08□□□□□ -0.47
TARDBP-219ENST00000617757 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.47
TARDBP-219ENST00000617757 RAPGEF3O95398 923 aa12.08□□□□□ -0.48
TARDBP-219ENST00000617757 ABCA6Q8N139 1617 aa12.08□□□□□ -0.48
TARDBP-219ENST00000617757 RAB3GAP2Q9H2M9 1393 aa12.07□□□□□ -0.48
TARDBP-219ENST00000617757 DUOX2Q9NRD8 1548 aa12.06□□□□□ -0.48
TARDBP-219ENST00000617757 KIF15Q9NS87 1388 aa12.05□□□□□ -0.48
TARDBP-219ENST00000617757 DIP2CQ9Y2E4 1556 aa12.05□□□□□ -0.48
TARDBP-219ENST00000617757 MAGI2Q86UL8 1455 aa12.04□□□□□ -0.48
TARDBP-219ENST00000617757 HRCP23327 699 aa12.04□□□□□ -0.48
TARDBP-219ENST00000617757 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
TARDBP-219ENST00000617757 EIF2AK4Q9P2K8 1649 aaKnown RBP12.04□□□□□ -0.48
TARDBP-219ENST00000617757 ANKRD50Q9ULJ7 1429 aa12.03□□□□□ -0.48
TARDBP-219ENST00000617757 BCORL1Q5H9F3 1711 aa12.02□□□□□ -0.49
TARDBP-219ENST00000617757 ERBINQ96RT1 1412 aa12.02□□□□□ -0.49
TARDBP-219ENST00000617757 UNC13BO14795 1591 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms