RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.56□□□□□ -1.362e-53■■■■■ 47.1
TARDBP-219ENST00000617757 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.69□□□□□ -1.021e-13■■■■■ 35.6
TARDBP-219ENST00000617757 TARDBPQ13148 414 aaKnown RBP eCLIP7.6□□□□□ -1.191e-13■■■■■ 26.9
TARDBP-219ENST00000617757 TIA1P31483 386 aaKnown RBP eCLIP7.68□□□□□ -1.181e-12■■■■□ 20.4
TARDBP-219ENST00000617757 SRSF7Q16629 238 aaKnown RBP eCLIP6.7□□□□□ -1.342e-10■■■□□ 18.4
TARDBP-219ENST00000617757 SF3B4Q15427 424 aaKnown RBP eCLIP7.17□□□□□ -1.268e-7■■□□□ 12.3
TARDBP-219ENST00000617757 GRSF1Q12849 480 aaKnown RBP eCLIP8.14□□□□□ -1.111e-11■■□□□ 12.1
TARDBP-219ENST00000617757 EIF4G2P78344 907 aaKnown RBP eCLIP11.4□□□□□ -0.588e-11■■□□□ 12.1
TARDBP-219ENST00000617757 FUSP35637 526 aaKnown RBP eCLIP5.2□□□□□ -1.583e-10■■□□□ 12.1
TARDBP-219ENST00000617757 ZC3H11AO75152 810 aaKnown RBP eCLIP8.69□□□□□ -1.021e-7■■□□□ 12
TARDBP-219ENST00000617757 LSM11P83369 360 aaKnown RBP eCLIP7.31□□□□□ -1.243e-9■■□□□ 11.9
TARDBP-219ENST00000617757 SRSF1Q07955 248 aaKnown RBP eCLIP6.96□□□□□ -1.32e-13■■□□□ 11.9
TARDBP-219ENST00000617757 TIAL1Q01085 375 aaKnown RBP eCLIP7.97□□□□□ -1.136e-7■■□□□ 11.7
TARDBP-219ENST00000617757 U2AF2P26368 475 aaKnown RBP eCLIP9.27□□□□□ -0.931e-14■□□□□ 11.3
TARDBP-219ENST00000617757 KHSRPQ92945 711 aaKnown RBP eCLIP8.48□□□□□ -1.058e-7■□□□□ 11
TARDBP-219ENST00000617757 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.66□□□□□ -1.023e-6■□□□□ 10.1
TARDBP-219ENST00000617757 RBM22Q9NW64 420 aaKnown RBP eCLIP8.22□□□□□ -1.095e-8■□□□□ 9.1
TARDBP-219ENST00000617757 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.43□□□□□ -0.93e-13■□□□□ 8.3
Retrieved 18 of 18 RNA–protein pairs in 6.4 ms