RNA–Protein interactions for RNA: ENST00000616760.1

CLIC1-210, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIC1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-210ENST00000616760 ASXL2Q76L83 1435 aa16.45■□□□□ 0.22
CLIC1-210ENST00000616760 C19orf67A6NJJ6 358 aa16.44■□□□□ 0.22
CLIC1-210ENST00000616760 TTBK1Q5TCY1 1321 aaPredicted RBP16.44■□□□□ 0.22
CLIC1-210ENST00000616760 UACAQ9BZF9 1416 aa16.43■□□□□ 0.22
CLIC1-210ENST00000616760 UGGT2Q9NYU1 1516 aa16.42■□□□□ 0.22
CLIC1-210ENST00000616760 DISP1Q96F81 1524 aa16.41■□□□□ 0.22
CLIC1-210ENST00000616760 CTTNBP2Q8WZ74 1663 aa16.41■□□□□ 0.22
CLIC1-210ENST00000616760 RAPGEF2Q9Y4G8 1499 aa16.41■□□□□ 0.22
CLIC1-210ENST00000616760 MAP3K4Q9Y6R4 1608 aa16.41■□□□□ 0.22
CLIC1-210ENST00000616760 VASPP50552 380 aaPredicted RBP16.4■□□□□ 0.22
CLIC1-210ENST00000616760 KIAA0556O60303 1618 aa16.4■□□□□ 0.22
CLIC1-210ENST00000616760 ZCCHC11Q5TAX3 1644 aaKnown RBP16.4■□□□□ 0.22
CLIC1-210ENST00000616760 KDM5BQ9UGL1 1544 aa16.39■□□□□ 0.21
CLIC1-210ENST00000616760 TEX14Q8IWB6 1497 aa16.38■□□□□ 0.21
CLIC1-210ENST00000616760 EVX2Q03828 476 aa16.38■□□□□ 0.21
CLIC1-210ENST00000616760 KDM4FA0A1W2PPD8 638 aa16.36■□□□□ 0.21
CLIC1-210ENST00000616760 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
CLIC1-210ENST00000616760 CD44P16070 742 aaKnown RBP16.34■□□□□ 0.21
CLIC1-210ENST00000616760 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
CLIC1-210ENST00000616760 ADGRL1O94910 1474 aa16.3■□□□□ 0.2
CLIC1-210ENST00000616760 GOLGA3Q08378 1498 aa16.3■□□□□ 0.2
CLIC1-210ENST00000616760 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
CLIC1-210ENST00000616760 WDR7Q9Y4E6 1490 aa16.29■□□□□ 0.2
CLIC1-210ENST00000616760 ILDR1Q86SU0 546 aaPredicted RBP16.29■□□□□ 0.2
CLIC1-210ENST00000616760 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
CLIC1-210ENST00000616760 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
CLIC1-210ENST00000616760 ABCA8O94911 1581 aa16.24■□□□□ 0.19
CLIC1-210ENST00000616760 COL17A1Q9UMD9 1497 aaPredicted RBP16.23■□□□□ 0.19
CLIC1-210ENST00000616760 MAGI3Q5TCQ9 1506 aa16.21■□□□□ 0.19
CLIC1-210ENST00000616760 EEA1Q15075 1411 aa16.2■□□□□ 0.18
CLIC1-210ENST00000616760 PAK3O75914 559 aaPredicted RBP16.2■□□□□ 0.18
CLIC1-210ENST00000616760 ZRANB1Q9UGI0 708 aa16.2■□□□□ 0.18
CLIC1-210ENST00000616760 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
CLIC1-210ENST00000616760 KLHL34Q8N239 644 aa16.18■□□□□ 0.18
CLIC1-210ENST00000616760 CD109Q6YHK3 1445 aa16.18■□□□□ 0.18
CLIC1-210ENST00000616760 IFNLR1Q8IU57 520 aaPredicted RBP16.16■□□□□ 0.18
CLIC1-210ENST00000616760 HECW2Q9P2P5 1572 aa16.16■□□□□ 0.18
CLIC1-210ENST00000616760 NUBP1P53384 320 aa16.15■□□□□ 0.18
CLIC1-210ENST00000616760 RASEFQ8IZ41 740 aa16.14■□□□□ 0.17
CLIC1-210ENST00000616760 ZNF579Q8NAF0 562 aaKnown RBP16.12■□□□□ 0.17
CLIC1-210ENST00000616760 TSPYL2Q9H2G4 693 aaPredicted RBP16.12■□□□□ 0.17
CLIC1-210ENST00000616760 KIF21BO75037 1637 aa16.11■□□□□ 0.17
CLIC1-210ENST00000616760 ABCA9Q8IUA7 1624 aa16.1■□□□□ 0.17
CLIC1-210ENST00000616760 KCNH8Q96L42 1107 aa16.1■□□□□ 0.17
CLIC1-210ENST00000616760 ARAP3Q8WWN8 1544 aa16.09■□□□□ 0.17
CLIC1-210ENST00000616760 SAMD9Q5K651 1589 aa16.08■□□□□ 0.16
CLIC1-210ENST00000616760 RAPGEF6Q8TEU7 1601 aa16.07■□□□□ 0.16
CLIC1-210ENST00000616760 PHLDB1Q86UU1 1377 aa16.06■□□□□ 0.16
CLIC1-210ENST00000616760 GABBR2O75899 941 aa16.06■□□□□ 0.16
CLIC1-210ENST00000616760 ATP10BO94823 1461 aa16.04■□□□□ 0.16
CLIC1-210ENST00000616760 CLCN6P51797 869 aa16.03■□□□□ 0.16
CLIC1-210ENST00000616760 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
CLIC1-210ENST00000616760 FAM212AQ96EL1 285 aa16.02■□□□□ 0.16
CLIC1-210ENST00000616760 PHF12Q96QT6 1004 aa16.02■□□□□ 0.16
CLIC1-210ENST00000616760 P3H3Q8IVL6 736 aa16.01■□□□□ 0.15
CLIC1-210ENST00000616760 SPOCK2Q92563 424 aa16.01■□□□□ 0.15
CLIC1-210ENST00000616760 NEO1Q92859 1461 aa16.01■□□□□ 0.15
CLIC1-210ENST00000616760 ADAMTSL3P82987 1691 aa15.99■□□□□ 0.15
CLIC1-210ENST00000616760 ARID3CA6NKF2 412 aa15.98■□□□□ 0.15
CLIC1-210ENST00000616760 CFAP74Q9C0B2 1584 aa15.98■□□□□ 0.15
CLIC1-210ENST00000616760 BCORL1Q5H9F3 1711 aa15.95■□□□□ 0.14
CLIC1-210ENST00000616760 RANGAP1P46060 587 aaPredicted RBP15.95■□□□□ 0.14
CLIC1-210ENST00000616760 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
CLIC1-210ENST00000616760 FBXO41Q8TF61 875 aa15.95■□□□□ 0.14
CLIC1-210ENST00000616760 NUP153P49790 1475 aaKnown RBP15.94■□□□□ 0.14
CLIC1-210ENST00000616760 FRMPD1Q5SYB0 1578 aa15.94■□□□□ 0.14
CLIC1-210ENST00000616760 PTPRMP28827 1452 aa15.92■□□□□ 0.14
CLIC1-210ENST00000616760 RICTORQ6R327 1708 aa15.92■□□□□ 0.14
CLIC1-210ENST00000616760 UBTFP17480 764 aaKnown RBP15.92■□□□□ 0.14
CLIC1-210ENST00000616760 EFCAB5A4FU69 1503 aa15.92■□□□□ 0.14
CLIC1-210ENST00000616760 ARHGEF40Q8TER5 1519 aa15.92■□□□□ 0.14
CLIC1-210ENST00000616760 FHOD3Q2V2M9 1422 aa15.91■□□□□ 0.14
CLIC1-210ENST00000616760 MADDQ8WXG6 1647 aa15.9■□□□□ 0.14
CLIC1-210ENST00000616760 GSE1Q14687 1217 aa15.89■□□□□ 0.13
CLIC1-210ENST00000616760 KIF12Q96FN5 646 aa15.89■□□□□ 0.13
CLIC1-210ENST00000616760 GALR2O43603 387 aaPredicted RBP15.88■□□□□ 0.13
CLIC1-210ENST00000616760 RAPGEF3O95398 923 aa15.88■□□□□ 0.13
CLIC1-210ENST00000616760 DENND4BO75064 1496 aaPredicted RBP15.87■□□□□ 0.13
CLIC1-210ENST00000616760 RIMS1Q86UR5 1692 aaKnown RBP15.86■□□□□ 0.13
CLIC1-210ENST00000616760 FANCAO15360 1455 aa15.86■□□□□ 0.13
CLIC1-210ENST00000616760 PLEKHD1A6NEE1 506 aa15.86■□□□□ 0.13
CLIC1-210ENST00000616760 PCF11O94913 1555 aaKnown RBP15.86■□□□□ 0.13
CLIC1-210ENST00000616760 ARID4BQ4LE39 1312 aaPredicted RBP15.86■□□□□ 0.13
CLIC1-210ENST00000616760 ZMYM4Q5VZL5 1548 aa15.85■□□□□ 0.13
CLIC1-210ENST00000616760 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.84■□□□□ 0.132e-10■■□□□ 14
CLIC1-210ENST00000616760 TTC37Q6PGP7 1564 aa15.84■□□□□ 0.13
CLIC1-210ENST00000616760 MS4A3Q96HJ5 214 aa15.84■□□□□ 0.13
CLIC1-210ENST00000616760 POGZQ7Z3K3 1410 aa15.83■□□□□ 0.12
CLIC1-210ENST00000616760 AKNAQ7Z591 1439 aa15.83■□□□□ 0.12
CLIC1-210ENST00000616760 MAP3K13O43283 966 aa15.82■□□□□ 0.12
CLIC1-210ENST00000616760 ZFYVE16Q7Z3T8 1539 aa15.81■□□□□ 0.12
CLIC1-210ENST00000616760 MYO5CQ9NQX4 1742 aa15.8■□□□□ 0.12
CLIC1-210ENST00000616760 MAGI2Q86UL8 1455 aa15.8■□□□□ 0.12
CLIC1-210ENST00000616760 CIZ1Q9ULV3 898 aaPredicted RBP15.8■□□□□ 0.12
CLIC1-210ENST00000616760 FER1L4A9Z1Z3 1794 aa15.8■□□□□ 0.12
CLIC1-210ENST00000616760 LMTK3Q96Q04 1460 aa15.79■□□□□ 0.12
CLIC1-210ENST00000616760 FMN1Q68DA7 1419 aa15.79■□□□□ 0.12
CLIC1-210ENST00000616760 HECW1Q76N89 1606 aa15.79■□□□□ 0.12
CLIC1-210ENST00000616760 PYGBP11216 843 aa15.78■□□□□ 0.12
CLIC1-210ENST00000616760 SGIP1Q9BQI5 828 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms