RNA–Protein interactions for RNA: ENST00000615544.4

ACTG1-216, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTG1, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-216ENST00000615544 CFAP74Q9C0B2 1584 aa19.44■□□□□ 0.7
ACTG1-216ENST00000615544 CCNB3Q8WWL7 1395 aa19.44■□□□□ 0.7
ACTG1-216ENST00000615544 ARAP3Q8WWN8 1544 aa19.43■□□□□ 0.7
ACTG1-216ENST00000615544 GPATCH8Q9UKJ3 1502 aaKnown RBP19.43■□□□□ 0.7
ACTG1-216ENST00000615544 PPARGC1BQ86YN6 1023 aaKnown RBP19.43■□□□□ 0.7
ACTG1-216ENST00000615544 KDM6BO15054 1643 aa19.41■□□□□ 0.7
ACTG1-216ENST00000615544 NEO1Q92859 1461 aa19.4■□□□□ 0.7
ACTG1-216ENST00000615544 SAMD9LQ8IVG5 1584 aa19.37■□□□□ 0.69
ACTG1-216ENST00000615544 HRCP23327 699 aa19.37■□□□□ 0.69
ACTG1-216ENST00000615544 COL17A1Q9UMD9 1497 aaPredicted RBP19.37■□□□□ 0.69
ACTG1-216ENST00000615544 AKNAQ7Z591 1439 aa19.36■□□□□ 0.69
ACTG1-216ENST00000615544 PHLDB1Q86UU1 1377 aa19.36■□□□□ 0.69
ACTG1-216ENST00000615544 ADGRL1O94910 1474 aa19.35■□□□□ 0.69
ACTG1-216ENST00000615544 EFCAB2Q5VUJ9 269 aa19.35■□□□□ 0.69
ACTG1-216ENST00000615544 MYOM3Q5VTT5 1437 aa19.34■□□□□ 0.69
ACTG1-216ENST00000615544 CFDP1Q9UEE9 299 aaPredicted RBP19.34■□□□□ 0.69
ACTG1-216ENST00000615544 ZNF777Q9ULD5 760 aaPredicted RBP19.34■□□□□ 0.69
ACTG1-216ENST00000615544 ABCC1P33527 1531 aa19.34■□□□□ 0.69
ACTG1-216ENST00000615544 FRMPD1Q5SYB0 1578 aa19.32■□□□□ 0.68
ACTG1-216ENST00000615544 SYCP2Q9BX26 1530 aa19.32■□□□□ 0.68
ACTG1-216ENST00000615544 RICTORQ6R327 1708 aa19.31■□□□□ 0.68
ACTG1-216ENST00000615544 CAMSAP2Q08AD1 1489 aa19.3■□□□□ 0.68
ACTG1-216ENST00000615544 SCAPERQ9BY12 1400 aa19.3■□□□□ 0.68
ACTG1-216ENST00000615544 ZNF644Q9H582 1327 aaPredicted RBP19.3■□□□□ 0.68
ACTG1-216ENST00000615544 ARHGEF12Q9NZN5 1544 aa19.29■□□□□ 0.68
ACTG1-216ENST00000615544 DENND4BO75064 1496 aaPredicted RBP19.28■□□□□ 0.68
ACTG1-216ENST00000615544 FGD6Q6ZV73 1430 aa19.28■□□□□ 0.68
ACTG1-216ENST00000615544 PTPN23Q9H3S7 1636 aa19.27■□□□□ 0.68
ACTG1-216ENST00000615544 POGZQ7Z3K3 1410 aa19.27■□□□□ 0.68
ACTG1-216ENST00000615544 RAPGEF3O95398 923 aa19.27■□□□□ 0.68
ACTG1-216ENST00000615544 MIA2Q96PC5 1412 aa19.26■□□□□ 0.67
ACTG1-216ENST00000615544 PLEKHH2Q8IVE3 1493 aa19.24■□□□□ 0.67
ACTG1-216ENST00000615544 TRAPPC8Q9Y2L5 1435 aa19.24■□□□□ 0.67
ACTG1-216ENST00000615544 ZNF518AQ6AHZ1 1483 aa19.22■□□□□ 0.67
ACTG1-216ENST00000615544 KIAA1107Q9UPP5 1409 aa19.22■□□□□ 0.67
ACTG1-216ENST00000615544 HNRNPMP52272 730 aaKnown RBP eCLIP19.22■□□□□ 0.67
ACTG1-216ENST00000615544 KDM5CP41229 1560 aa19.21■□□□□ 0.67
ACTG1-216ENST00000615544 ZMYM4Q5VZL5 1548 aa19.21■□□□□ 0.67
ACTG1-216ENST00000615544 MBD5Q9P267 1494 aa19.2■□□□□ 0.66
ACTG1-216ENST00000615544 TCOF1Q13428 1488 aaKnown RBP19.19■□□□□ 0.66
ACTG1-216ENST00000615544 AFAP1Q8N556 730 aa19.19■□□□□ 0.66
ACTG1-216ENST00000615544 HECW2Q9P2P5 1572 aa19.18■□□□□ 0.66
ACTG1-216ENST00000615544 ARHGEF5Q12774 1597 aa19.18■□□□□ 0.66
ACTG1-216ENST00000615544 CCDC141Q6ZP82 1450 aa19.17■□□□□ 0.66
ACTG1-216ENST00000615544 CROCC2H7BZ55 1655 aa19.16■□□□□ 0.66
ACTG1-216ENST00000615544 ARHGEF40Q8TER5 1519 aa19.16■□□□□ 0.66
ACTG1-216ENST00000615544 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
ACTG1-216ENST00000615544 INO80Q9ULG1 1556 aaPredicted RBP19.15■□□□□ 0.66
ACTG1-216ENST00000615544 YEATS2Q9ULM3 1422 aa19.15■□□□□ 0.66
ACTG1-216ENST00000615544 KIDINS220Q9ULH0 1771 aa19.15■□□□□ 0.66
ACTG1-216ENST00000615544 ZFYVE16Q7Z3T8 1539 aa19.14■□□□□ 0.66
ACTG1-216ENST00000615544 DNMT1P26358 1616 aaKnown RBP19.14■□□□□ 0.66
ACTG1-216ENST00000615544 ABCA6Q8N139 1617 aa19.13■□□□□ 0.65
ACTG1-216ENST00000615544 ATP7AQ04656 1500 aa19.13■□□□□ 0.65
ACTG1-216ENST00000615544 RRBP1Q9P2E9 1410 aaKnown RBP19.12■□□□□ 0.65
ACTG1-216ENST00000615544 DIP2CQ9Y2E4 1556 aa19.11■□□□□ 0.65
ACTG1-216ENST00000615544 MLH3Q9UHC1 1453 aa19.1■□□□□ 0.65
ACTG1-216ENST00000615544 DAPK1P53355 1430 aa19.1■□□□□ 0.65
ACTG1-216ENST00000615544 MYT1LQ9UL68 1186 aa19.1■□□□□ 0.65
ACTG1-216ENST00000615544 MAGI2Q86UL8 1455 aa19.1■□□□□ 0.65
ACTG1-216ENST00000615544 SPAG9O60271 1321 aaKnown RBP19.1■□□□□ 0.65
ACTG1-216ENST00000615544 ABCC5O15440 1437 aa19.09■□□□□ 0.65
ACTG1-216ENST00000615544 C9orf84Q5VXU9 1444 aa19.07■□□□□ 0.64
ACTG1-216ENST00000615544 SIGLEC1Q9BZZ2 1709 aa19.07■□□□□ 0.64
ACTG1-216ENST00000615544 MAST1Q9Y2H9 1570 aa19.07■□□□□ 0.64
ACTG1-216ENST00000615544 ADGBQ8N7X0 1667 aa19.06■□□□□ 0.64
ACTG1-216ENST00000615544 SHANK2Q9UPX8 1470 aa19.06■□□□□ 0.64
ACTG1-216ENST00000615544 RSPH4AQ5TD94 716 aa19.04■□□□□ 0.64
ACTG1-216ENST00000615544 ITGAEP38570 1179 aa19.03■□□□□ 0.64
ACTG1-216ENST00000615544 PLXNC1O60486 1568 aa19.02■□□□□ 0.64
ACTG1-216ENST00000615544 RTEL1-TNFRSF6BF6WH68 1400 aa19.02■□□□□ 0.64
ACTG1-216ENST00000615544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.02■□□□□ 0.645e-7■□□□□ 8.4
ACTG1-216ENST00000615544 TSPY4P0CV99 314 aa19.02■□□□□ 0.63
ACTG1-216ENST00000615544 TSPY10P0CW01 314 aa19.02■□□□□ 0.63
ACTG1-216ENST00000615544 ATP10AO60312 1499 aa19.01■□□□□ 0.63
ACTG1-216ENST00000615544 PTPRKQ15262 1439 aa19.01■□□□□ 0.63
ACTG1-216ENST00000615544 CHIC2Q9UKJ5 165 aa19■□□□□ 0.63
ACTG1-216ENST00000615544 REREQ9P2R6 1566 aa18.98■□□□□ 0.63
ACTG1-216ENST00000615544 ZEB1P37275 1124 aaPredicted RBP18.97■□□□□ 0.63
ACTG1-216ENST00000615544 A2MP01023 1474 aa18.96■□□□□ 0.63
ACTG1-216ENST00000615544 ADGRL2O95490 1459 aa18.96■□□□□ 0.63
ACTG1-216ENST00000615544 KIF15Q9NS87 1388 aa18.94■□□□□ 0.62
ACTG1-216ENST00000615544 ARID4BQ4LE39 1312 aaPredicted RBP18.94■□□□□ 0.62
ACTG1-216ENST00000615544 ANKRD30AQ9BXX3 1397 aa18.93■□□□□ 0.62
ACTG1-216ENST00000615544 RRP7BPQ9NSQ0 103 aa18.92■□□□□ 0.62
ACTG1-216ENST00000615544 NCOA1Q15788 1441 aa18.92■□□□□ 0.62
ACTG1-216ENST00000615544 BCORL1Q5H9F3 1711 aa18.92■□□□□ 0.62
ACTG1-216ENST00000615544 DUOX2Q9NRD8 1548 aa18.92■□□□□ 0.62
ACTG1-216ENST00000615544 AGLP35573 1532 aa18.9■□□□□ 0.62
ACTG1-216ENST00000615544 DHX29Q7Z478 1369 aaKnown RBP18.9■□□□□ 0.62
ACTG1-216ENST00000615544 MLECQ14165 292 aa18.88■□□□□ 0.61
ACTG1-216ENST00000615544 EIF2AK4Q9P2K8 1649 aaKnown RBP18.88■□□□□ 0.61
ACTG1-216ENST00000615544 ROCK1Q13464 1354 aa18.88■□□□□ 0.61
ACTG1-216ENST00000615544 GCC2Q8IWJ2 1684 aa18.86■□□□□ 0.61
ACTG1-216ENST00000615544 MADDQ8WXG6 1647 aa18.86■□□□□ 0.61
ACTG1-216ENST00000615544 ERBINQ96RT1 1412 aa18.85■□□□□ 0.61
ACTG1-216ENST00000615544 ADAMTSL3P82987 1691 aa18.85■□□□□ 0.61
ACTG1-216ENST00000615544 FER1L4A9Z1Z3 1794 aa18.85■□□□□ 0.61
ACTG1-216ENST00000615544 RNF17Q9BXT8 1623 aaKnown RBP18.84■□□□□ 0.61
ACTG1-216ENST00000615544 ANKRD50Q9ULJ7 1429 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms