RNA–Protein interactions for RNA: ENST00000613647.4

FGFR3-210, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 5 BASIC

Gene FGFR3, Length 4,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-210ENST00000613647 PHLDB1Q86UU1 1377 aa25.72■■□□□ 1.71
FGFR3-210ENST00000613647 RGS3P49796 1198 aa25.7■■□□□ 1.71
FGFR3-210ENST00000613647 FTSJ3Q8IY81 847 aaKnown RBP25.7■■□□□ 1.71
FGFR3-210ENST00000613647 LAS1LQ9Y4W2 734 aaKnown RBP25.7■■□□□ 1.7
FGFR3-210ENST00000613647 KTN1Q86UP2 1357 aaKnown RBP25.69■■□□□ 1.7
FGFR3-210ENST00000613647 SRPK2P78362 688 aaKnown RBP25.68■■□□□ 1.7
FGFR3-210ENST00000613647 CFTRP13569 1480 aa25.68■■□□□ 1.7
FGFR3-210ENST00000613647 ARAP1Q96P48 1450 aa25.67■■□□□ 1.7
FGFR3-210ENST00000613647 MORC1Q86VD1 984 aa25.66■■□□□ 1.7
FGFR3-210ENST00000613647 SPAG9O60271 1321 aaKnown RBP25.66■■□□□ 1.7
FGFR3-210ENST00000613647 STK26Q9P289 416 aa25.66■■□□□ 1.7
FGFR3-210ENST00000613647 ARXQ96QS3 562 aa25.65■■□□□ 1.7
FGFR3-210ENST00000613647 RALBP1Q15311 655 aa25.64■■□□□ 1.69
FGFR3-210ENST00000613647 ZNF644Q9H582 1327 aaPredicted RBP25.63■■□□□ 1.69
FGFR3-210ENST00000613647 ST20-MTHFSA0A0A6YYL1 179 aa25.63■■□□□ 1.69
FGFR3-210ENST00000613647 DDRGK1Q96HY6 314 aa25.62■■□□□ 1.69
FGFR3-210ENST00000613647 PTPRGP23470 1445 aa25.62■■□□□ 1.69
FGFR3-210ENST00000613647 FGD6Q6ZV73 1430 aa25.62■■□□□ 1.69
FGFR3-210ENST00000613647 ANP32EQ9BTT0 268 aa25.62■■□□□ 1.69
FGFR3-210ENST00000613647 AQRO60306 1485 aaKnown RBP eCLIP25.6■■□□□ 1.692e-7■■■■□ 19.6
FGFR3-210ENST00000613647 LRRC9Q6ZRR7 1453 aa25.6■■□□□ 1.69
FGFR3-210ENST00000613647 ANP32BQ92688 251 aaKnown RBP25.6■■□□□ 1.69
FGFR3-210ENST00000613647 BECN1Q14457 450 aa25.57■■□□□ 1.68
FGFR3-210ENST00000613647 PRXQ9BXM0 1461 aa25.56■■□□□ 1.68
FGFR3-210ENST00000613647 RBM19Q9Y4C8 960 aaKnown RBP25.56■■□□□ 1.68
FGFR3-210ENST00000613647 MYOM3Q5VTT5 1437 aa25.54■■□□□ 1.68
FGFR3-210ENST00000613647 RCAN3Q9UKA8 241 aa25.54■■□□□ 1.68
FGFR3-210ENST00000613647 NLRP13Q86W25 1043 aa25.53■■□□□ 1.68
FGFR3-210ENST00000613647 PRKRIP1Q9H875 184 aaPredicted RBP25.53■■□□□ 1.68
FGFR3-210ENST00000613647 ERICH3Q5RHP9 1530 aa25.53■■□□□ 1.68
FGFR3-210ENST00000613647 NESP48681 1621 aa25.5■■□□□ 1.67
FGFR3-210ENST00000613647 SOX12O15370 315 aa25.5■■□□□ 1.67
FGFR3-210ENST00000613647 ERICH6BQ5W0A0 696 aa25.49■■□□□ 1.67
FGFR3-210ENST00000613647 LMOD2Q6P5Q4 547 aa25.49■■□□□ 1.67
FGFR3-210ENST00000613647 CASKIN1Q8WXD9 1431 aa25.48■■□□□ 1.67
FGFR3-210ENST00000613647 CCDC144AA2RUR9 1427 aa25.48■■□□□ 1.67
FGFR3-210ENST00000613647 NUTM2DQ5VT03 806 aaPredicted RBP25.47■■□□□ 1.67
FGFR3-210ENST00000613647 U2AF1L5P0DN76 240 aaPredicted RBP25.46■■□□□ 1.67
FGFR3-210ENST00000613647 U2AF1Q01081 240 aaKnown RBP eCLIP25.46■■□□□ 1.67
FGFR3-210ENST00000613647 WASHC2CQ9Y4E1 1318 aa25.46■■□□□ 1.67
FGFR3-210ENST00000613647 CUX1P39880 1505 aa25.45■■□□□ 1.66
FGFR3-210ENST00000613647 HDGFP51858 240 aaKnown RBP25.45■■□□□ 1.66
FGFR3-210ENST00000613647 A0A0G2JS52 829 aa25.44■■□□□ 1.66
FGFR3-210ENST00000613647 PNNQ9H307 717 aaKnown RBP25.44■■□□□ 1.66
FGFR3-210ENST00000613647 UACAQ9BZF9 1416 aa25.44■■□□□ 1.66
FGFR3-210ENST00000613647 NOP58Q9Y2X3 529 aaKnown RBP25.44■■□□□ 1.66
FGFR3-210ENST00000613647 TOP2BQ02880 1626 aa25.43■■□□□ 1.66
FGFR3-210ENST00000613647 USP47Q96K76 1375 aa25.42■■□□□ 1.66
FGFR3-210ENST00000613647 RRBP1Q9P2E9 1410 aaKnown RBP25.42■■□□□ 1.66
FGFR3-210ENST00000613647 MS4A1P11836 297 aa25.42■■□□□ 1.66
FGFR3-210ENST00000613647 EIF5BO60841 1220 aaKnown RBP25.42■■□□□ 1.66
FGFR3-210ENST00000613647 NCOA2Q15596 1464 aa25.41■■□□□ 1.66
FGFR3-210ENST00000613647 TSHZ2Q9NRE2 1034 aa25.41■■□□□ 1.66
FGFR3-210ENST00000613647 PANK3Q9H999 370 aa25.4■■□□□ 1.66
FGFR3-210ENST00000613647 HDGFL2Q7Z4V5 671 aaPredicted RBP25.4■■□□□ 1.66
FGFR3-210ENST00000613647 TRAK1Q9UPV9 953 aa25.4■■□□□ 1.66
FGFR3-210ENST00000613647 TRHP20396 242 aaPredicted RBP25.37■■□□□ 1.65
FGFR3-210ENST00000613647 EIF3AQ14152 1382 aaKnown RBP25.37■■□□□ 1.65
FGFR3-210ENST00000613647 HMGXB3Q12766 1538 aa25.36■■□□□ 1.65
FGFR3-210ENST00000613647 KIF15Q9NS87 1388 aa25.35■■□□□ 1.65
FGFR3-210ENST00000613647 CCDC146Q8IYE0 955 aa25.35■■□□□ 1.65
FGFR3-210ENST00000613647 MYBBP1AQ9BQG0 1328 aaKnown RBP25.33■■□□□ 1.65
FGFR3-210ENST00000613647 POLA1P09884 1462 aaPredicted RBP25.33■■□□□ 1.65
FGFR3-210ENST00000613647 GOLGA2Q08379 1002 aa25.33■■□□□ 1.65
FGFR3-210ENST00000613647 TOPBP1Q92547 1522 aa25.32■■□□□ 1.64
FGFR3-210ENST00000613647 HAP1P54257 671 aaPredicted RBP25.32■■□□□ 1.64
FGFR3-210ENST00000613647 GRIN2BQ13224 1484 aa25.31■■□□□ 1.64
FGFR3-210ENST00000613647 CHMP4BQ9H444 224 aaKnown RBP25.31■■□□□ 1.64
FGFR3-210ENST00000613647 FYCO1Q9BQS8 1478 aa25.3■■□□□ 1.64
FGFR3-210ENST00000613647 PDE3BQ13370 1112 aa25.3■■□□□ 1.64
FGFR3-210ENST00000613647 BICRAQ9NZM4 1560 aa25.29■■□□□ 1.64
FGFR3-210ENST00000613647 ANKRD50Q9ULJ7 1429 aa25.27■■□□□ 1.64
FGFR3-210ENST00000613647 KIF7Q2M1P5 1343 aa25.27■■□□□ 1.64
FGFR3-210ENST00000613647 CC2D2AQ9P2K1 1620 aa25.25■■□□□ 1.63
FGFR3-210ENST00000613647 TERF2IPQ9NYB0 399 aa25.24■■□□□ 1.63
FGFR3-210ENST00000613647 CCDC7Q96M83 1385 aa25.24■■□□□ 1.63
FGFR3-210ENST00000613647 ZBED9Q6R2W3 1325 aa25.23■■□□□ 1.63
FGFR3-210ENST00000613647 CASC1Q6TDU7 716 aa25.23■■□□□ 1.63
FGFR3-210ENST00000613647 WASHC2AQ641Q2 1341 aa25.22■■□□□ 1.63
FGFR3-210ENST00000613647 GOLGA6L22H0YM25 854 aa25.22■■□□□ 1.63
FGFR3-210ENST00000613647 TCERG1O14776 1098 aaKnown RBP25.2■■□□□ 1.62
FGFR3-210ENST00000613647 CYB5RLQ6IPT4 315 aa25.2■■□□□ 1.62
FGFR3-210ENST00000613647 CLUAP1Q96AJ1 413 aa25.2■■□□□ 1.62
FGFR3-210ENST00000613647 DNAJC5BQ9UF47 199 aa25.19■■□□□ 1.62
FGFR3-210ENST00000613647 IPO8O15397 1037 aaKnown RBP25.19■■□□□ 1.62
FGFR3-210ENST00000613647 PRDM2Q13029 1718 aa25.18■■□□□ 1.62
FGFR3-210ENST00000613647 OSCARQ8IYS5 282 aa25.17■■□□□ 1.62
FGFR3-210ENST00000613647 RRP7AQ9Y3A4 280 aaKnown RBP25.16■■□□□ 1.62
FGFR3-210ENST00000613647 NCLP19338 710 aaKnown RBP25.16■■□□□ 1.62
FGFR3-210ENST00000613647 RTF1Q92541 710 aaKnown RBP25.16■■□□□ 1.62
FGFR3-210ENST00000613647 AFAP1Q8N556 730 aa25.15■■□□□ 1.62
FGFR3-210ENST00000613647 VGFO15240 615 aaPredicted RBP25.15■■□□□ 1.62
FGFR3-210ENST00000613647 EFCAB5A4FU69 1503 aa25.15■■□□□ 1.62
FGFR3-210ENST00000613647 ITPRIPQ8IWB1 547 aa25.14■■□□□ 1.61
FGFR3-210ENST00000613647 PLIN1O60240 522 aa25.13■■□□□ 1.61
FGFR3-210ENST00000613647 NUTM2FA1L443 756 aa25.13■■□□□ 1.61
FGFR3-210ENST00000613647 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.13■■□□□ 1.61
FGFR3-210ENST00000613647 TIAM1Q13009 1591 aa25.13■■□□□ 1.61
FGFR3-210ENST00000613647 PAK3O75914 559 aaPredicted RBP25.13■■□□□ 1.61
FGFR3-210ENST00000613647 SMC4Q9NTJ3 1288 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms