RNA–Protein interactions for RNA: ENST00000612309.4

DDB2-206, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-206ENST00000612309 ARHGEF11O15085 1522 aa11.28□□□□□ -0.6
DDB2-206ENST00000612309 EEA1Q15075 1411 aa11.28□□□□□ -0.6
DDB2-206ENST00000612309 CLIP1P30622 1438 aa11.28□□□□□ -0.6
DDB2-206ENST00000612309 CEP170Q5SW79 1584 aa11.27□□□□□ -0.6
DDB2-206ENST00000612309 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
DDB2-206ENST00000612309 TNIKQ9UKE5 1360 aa11.26□□□□□ -0.61
DDB2-206ENST00000612309 ERCC6L2Q5T890 1561 aa11.26□□□□□ -0.61
DDB2-206ENST00000612309 PRG4Q92954 1404 aaPredicted RBP11.25□□□□□ -0.61
DDB2-206ENST00000612309 RIMBP3CA6NJZ7 1639 aa11.24□□□□□ -0.61
DDB2-206ENST00000612309 RIMBP3BA6NNM3 1639 aa11.24□□□□□ -0.61
DDB2-206ENST00000612309 RIMBP3Q9UFD9 1639 aa11.24□□□□□ -0.61
DDB2-206ENST00000612309 TRIM52Q96A61 297 aa11.23□□□□□ -0.61
DDB2-206ENST00000612309 IPO9Q96P70 1041 aaKnown RBP11.23□□□□□ -0.61
DDB2-206ENST00000612309 BRD2P25440 801 aaKnown RBP11.22□□□□□ -0.61
DDB2-206ENST00000612309 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
DDB2-206ENST00000612309 LAS1LQ9Y4W2 734 aaKnown RBP11.22□□□□□ -0.61
DDB2-206ENST00000612309 NUP160Q12769 1436 aa11.22□□□□□ -0.61
DDB2-206ENST00000612309 FOXD1Q16676 465 aa11.21□□□□□ -0.61
DDB2-206ENST00000612309 RRP9O43818 475 aaKnown RBP11.21□□□□□ -0.62
DDB2-206ENST00000612309 ARID4BQ4LE39 1312 aaPredicted RBP11.2□□□□□ -0.62
DDB2-206ENST00000612309 HSP90AA1P07900 732 aaKnown RBP11.2□□□□□ -0.62
DDB2-206ENST00000612309 RSPH4AQ5TD94 716 aa11.2□□□□□ -0.62
DDB2-206ENST00000612309 ARAP1Q96P48 1450 aa11.2□□□□□ -0.62
DDB2-206ENST00000612309 GTF2E1P29083 439 aaPredicted RBP11.2□□□□□ -0.62
DDB2-206ENST00000612309 ANP32AP39687 249 aaKnown RBP11.2□□□□□ -0.62
DDB2-206ENST00000612309 SAMD1Q6SPF0 538 aaPredicted RBP11.2□□□□□ -0.62
DDB2-206ENST00000612309 PLCD3Q8N3E9 789 aa11.2□□□□□ -0.62
DDB2-206ENST00000612309 CUL7Q14999 1698 aa11.19□□□□□ -0.62
DDB2-206ENST00000612309 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
DDB2-206ENST00000612309 USP35Q9P2H5 1018 aa11.19□□□□□ -0.62
DDB2-206ENST00000612309 PRXQ9BXM0 1461 aa11.19□□□□□ -0.62
DDB2-206ENST00000612309 KANK4Q5T7N3 995 aaPredicted RBP11.18□□□□□ -0.62
DDB2-206ENST00000612309 KIAA0586Q9BVV6 1533 aa11.17□□□□□ -0.62
DDB2-206ENST00000612309 PPP4R2Q9NY27 417 aa11.17□□□□□ -0.62
DDB2-206ENST00000612309 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
DDB2-206ENST00000612309 PRDM4Q9UKN5 801 aa11.16□□□□□ -0.62
DDB2-206ENST00000612309 FAM43AQ8N2R8 423 aa11.16□□□□□ -0.62
DDB2-206ENST00000612309 ZFP91Q96JP5 570 aaPredicted RBP11.15□□□□□ -0.62
DDB2-206ENST00000612309 CANXP27824 592 aaKnown RBP11.15□□□□□ -0.62
DDB2-206ENST00000612309 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
DDB2-206ENST00000612309 PTPRGP23470 1445 aa11.13□□□□□ -0.63
DDB2-206ENST00000612309 ZNF326Q5BKZ1 582 aaKnown RBP11.13□□□□□ -0.63
DDB2-206ENST00000612309 STAC3Q96MF2 364 aa11.13□□□□□ -0.63
DDB2-206ENST00000612309 IQGAP2Q13576 1575 aa11.12□□□□□ -0.63
DDB2-206ENST00000612309 IPO4Q8TEX9 1081 aaKnown RBP11.12□□□□□ -0.63
DDB2-206ENST00000612309 GSE1Q14687 1217 aa11.11□□□□□ -0.63
DDB2-206ENST00000612309 CARMIL2Q6F5E8 1435 aa11.11□□□□□ -0.63
DDB2-206ENST00000612309 B4GALNT3Q6L9W6 998 aa11.09□□□□□ -0.63
DDB2-206ENST00000612309 HOMEZQ8IX15 550 aa11.09□□□□□ -0.63
DDB2-206ENST00000612309 CCER2I3L3R5 266 aa11.09□□□□□ -0.63
DDB2-206ENST00000612309 FAM50AQ14320 339 aaKnown RBP11.09□□□□□ -0.63
DDB2-206ENST00000612309 DHX57Q6P158 1386 aaKnown RBP11.08□□□□□ -0.64
DDB2-206ENST00000612309 KIF21BO75037 1637 aa11.08□□□□□ -0.64
DDB2-206ENST00000612309 NPM2Q86SE8 214 aaKnown RBP11.08□□□□□ -0.64
DDB2-206ENST00000612309 FRAT1Q92837 279 aaPredicted RBP11.07□□□□□ -0.64
DDB2-206ENST00000612309 SECISBP2LQ93073 1101 aaKnown RBP11.07□□□□□ -0.64
DDB2-206ENST00000612309 VGLL3A8MV65 326 aa11.07□□□□□ -0.64
DDB2-206ENST00000612309 CNGB1Q14028 1251 aaPredicted RBP11.07□□□□□ -0.64
DDB2-206ENST00000612309 C14orf37Q86TY3 774 aa11.07□□□□□ -0.64
DDB2-206ENST00000612309 RRAGDQ9NQL2 400 aaPredicted RBP11.06□□□□□ -0.64
DDB2-206ENST00000612309 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
DDB2-206ENST00000612309 DISP1Q96F81 1524 aa11.06□□□□□ -0.64
DDB2-206ENST00000612309 ZBTB22O15209 634 aa11.06□□□□□ -0.64
DDB2-206ENST00000612309 DDX10Q13206 875 aaKnown RBP11.06□□□□□ -0.64
DDB2-206ENST00000612309 PLB1Q6P1J6 1458 aa11.05□□□□□ -0.64
DDB2-206ENST00000612309 DCAF11Q8TEB1 546 aa11.05□□□□□ -0.64
DDB2-206ENST00000612309 PPM1GO15355 546 aaPredicted RBP11.04□□□□□ -0.64
DDB2-206ENST00000612309 CALD1Q05682 793 aaKnown RBP11.04□□□□□ -0.64
DDB2-206ENST00000612309 VPS8Q8N3P4 1428 aa11.04□□□□□ -0.64
DDB2-206ENST00000612309 FAM69CQ0P6D2 419 aa11.04□□□□□ -0.64
DDB2-206ENST00000612309 ZHX1Q9UKY1 873 aaPredicted RBP11.04□□□□□ -0.64
DDB2-206ENST00000612309 SHROOM2Q13796 1616 aa11.03□□□□□ -0.64
DDB2-206ENST00000612309 CTTNBP2Q8WZ74 1663 aa11.03□□□□□ -0.64
DDB2-206ENST00000612309 ZNF777Q9ULD5 760 aaPredicted RBP11.02□□□□□ -0.64
DDB2-206ENST00000612309 ZNF830Q96NB3 372 aaPredicted RBP11.02□□□□□ -0.65
DDB2-206ENST00000612309 PNNQ9H307 717 aaKnown RBP11.01□□□□□ -0.65
DDB2-206ENST00000612309 FTSJ3Q8IY81 847 aaKnown RBP11.01□□□□□ -0.65
DDB2-206ENST00000612309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
DDB2-206ENST00000612309 TAOK2Q9UL54 1235 aa11□□□□□ -0.65
DDB2-206ENST00000612309 KIAA0556O60303 1618 aa10.99□□□□□ -0.65
DDB2-206ENST00000612309 PPP1R15AO75807 674 aaPredicted RBP10.99□□□□□ -0.65
DDB2-206ENST00000612309 UGGT2Q9NYU1 1516 aa10.99□□□□□ -0.65
DDB2-206ENST00000612309 UACAQ9BZF9 1416 aa10.98□□□□□ -0.65
DDB2-206ENST00000612309 ANP32CO43423 234 aa10.98□□□□□ -0.65
DDB2-206ENST00000612309 HNRNPUQ00839 825 aaKnown RBP eCLIP10.98□□□□□ -0.65
DDB2-206ENST00000612309 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
DDB2-206ENST00000612309 CHIC2Q9UKJ5 165 aa10.98□□□□□ -0.65
DDB2-206ENST00000612309 MTUS2Q5JR59 1369 aa10.96□□□□□ -0.65
DDB2-206ENST00000612309 ADCY10Q96PN6 1610 aa10.96□□□□□ -0.66
DDB2-206ENST00000612309 MAPK8IP2Q13387 824 aaPredicted RBP10.94□□□□□ -0.66
DDB2-206ENST00000612309 CNPY4Q8N129 248 aa10.94□□□□□ -0.66
DDB2-206ENST00000612309 NFKBIBQ15653 356 aa10.93□□□□□ -0.66
DDB2-206ENST00000612309 PDCL3Q9H2J4 239 aa10.93□□□□□ -0.66
DDB2-206ENST00000612309 TEX2Q8IWB9 1127 aa10.92□□□□□ -0.66
DDB2-206ENST00000612309 ARID3AQ99856 593 aa10.92□□□□□ -0.66
DDB2-206ENST00000612309 ASXL2Q76L83 1435 aa10.92□□□□□ -0.66
DDB2-206ENST00000612309 PRDM10Q9NQV6 1147 aa10.91□□□□□ -0.66
DDB2-206ENST00000612309 KCNG1Q9UIX4 513 aa10.91□□□□□ -0.66
DDB2-206ENST00000612309 ABCC2Q92887 1545 aa10.9□□□□□ -0.66
DDB2-206ENST00000612309 PLEKHD1A6NEE1 506 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms