RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 ARAP3Q8WWN8 1544 aa31.43■■■□□ 2.62
PNKP-215ENST00000600910 FGD6Q6ZV73 1430 aa31.42■■■□□ 2.62
PNKP-215ENST00000600910 MIA2Q96PC5 1412 aa31.42■■■□□ 2.62
PNKP-215ENST00000600910 TSPOAP1O95153 1857 aa31.4■■■□□ 2.62
PNKP-215ENST00000600910 FANCAO15360 1455 aa31.37■■■□□ 2.61
PNKP-215ENST00000600910 EFCAB2Q5VUJ9 269 aa31.37■■■□□ 2.61
PNKP-215ENST00000600910 ZNF777Q9ULD5 760 aaPredicted RBP31.37■■■□□ 2.61
PNKP-215ENST00000600910 PPRC1Q5VV67 1664 aaKnown RBP31.37■■■□□ 2.61
PNKP-215ENST00000600910 PTPN23Q9H3S7 1636 aa31.35■■■□□ 2.61
PNKP-215ENST00000600910 RRBP1Q9P2E9 1410 aaKnown RBP31.35■■■□□ 2.61
PNKP-215ENST00000600910 ZNF644Q9H582 1327 aaPredicted RBP31.33■■■□□ 2.61
PNKP-215ENST00000600910 SAMD9LQ8IVG5 1584 aa31.32■■■□□ 2.6
PNKP-215ENST00000600910 CFAP74Q9C0B2 1584 aa31.31■■■□□ 2.6
PNKP-215ENST00000600910 CAMSAP2Q08AD1 1489 aa31.31■■■□□ 2.6
PNKP-215ENST00000600910 TEX14Q8IWB6 1497 aa31.31■■■□□ 2.6
PNKP-215ENST00000600910 TCOF1Q13428 1488 aaKnown RBP31.29■■■□□ 2.6
PNKP-215ENST00000600910 FAM50AQ14320 339 aaKnown RBP31.27■■■□□ 2.6
PNKP-215ENST00000600910 NEO1Q92859 1461 aa31.27■■■□□ 2.6
PNKP-215ENST00000600910 AKNAQ7Z591 1439 aa31.27■■■□□ 2.6
PNKP-215ENST00000600910 ADGRL1O94910 1474 aa31.23■■■□□ 2.59
PNKP-215ENST00000600910 ABCC1P33527 1531 aa31.23■■■□□ 2.59
PNKP-215ENST00000600910 PLEKHH2Q8IVE3 1493 aa31.22■■■□□ 2.59
PNKP-215ENST00000600910 SYCP2Q9BX26 1530 aa31.21■■■□□ 2.59
PNKP-215ENST00000600910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.2■■■□□ 2.59
PNKP-215ENST00000600910 KIAA1107Q9UPP5 1409 aa31.19■■■□□ 2.58
PNKP-215ENST00000600910 ARHGEF12Q9NZN5 1544 aa31.19■■■□□ 2.58
PNKP-215ENST00000600910 HNRNPMP52272 730 aaKnown RBP eCLIP31.18■■■□□ 2.58
PNKP-215ENST00000600910 SCAPERQ9BY12 1400 aa31.17■■■□□ 2.58
PNKP-215ENST00000600910 MBD5Q9P267 1494 aa31.16■■■□□ 2.58
PNKP-215ENST00000600910 TRIM26Q12899 539 aaPredicted RBP31.13■■■□□ 2.57
PNKP-215ENST00000600910 ARHGEF5Q12774 1597 aa31.12■■■□□ 2.57
PNKP-215ENST00000600910 DNMT1P26358 1616 aaKnown RBP31.1■■■□□ 2.57
PNKP-215ENST00000600910 TRAPPC8Q9Y2L5 1435 aa31.1■■■□□ 2.57
PNKP-215ENST00000600910 DENND4BO75064 1496 aaPredicted RBP31.08■■■□□ 2.57
PNKP-215ENST00000600910 ABCC5O15440 1437 aa31.08■■■□□ 2.57
PNKP-215ENST00000600910 ITGAEP38570 1179 aa31.08■■■□□ 2.57
PNKP-215ENST00000600910 DAPK1P53355 1430 aa31.08■■■□□ 2.57
PNKP-215ENST00000600910 CCDC141Q6ZP82 1450 aa31.08■■■□□ 2.57
PNKP-215ENST00000600910 RSPH4AQ5TD94 716 aa31.07■■■□□ 2.56
PNKP-215ENST00000600910 POGZQ7Z3K3 1410 aa31.06■■■□□ 2.56
PNKP-215ENST00000600910 AFAP1Q8N556 730 aa31.05■■■□□ 2.56
PNKP-215ENST00000600910 ZNF518AQ6AHZ1 1483 aa31.04■■■□□ 2.56
PNKP-215ENST00000600910 COL17A1Q9UMD9 1497 aaPredicted RBP31.04■■■□□ 2.56
PNKP-215ENST00000600910 RAPGEF3O95398 923 aa31.03■■■□□ 2.56
PNKP-215ENST00000600910 CROCC2H7BZ55 1655 aa31.03■■■□□ 2.56
PNKP-215ENST00000600910 RICTORQ6R327 1708 aa31.02■■■□□ 2.56
PNKP-215ENST00000600910 PTPRKQ15262 1439 aa31.01■■■□□ 2.55
PNKP-215ENST00000600910 FRMPD1Q5SYB0 1578 aa31■■■□□ 2.55
PNKP-215ENST00000600910 TSPY4P0CV99 314 aa30.99■■■□□ 2.55
PNKP-215ENST00000600910 TSPY10P0CW01 314 aa30.99■■■□□ 2.55
PNKP-215ENST00000600910 KDM5CP41229 1560 aa30.98■■■□□ 2.55
PNKP-215ENST00000600910 KDM6BO15054 1643 aa30.97■■■□□ 2.55
PNKP-215ENST00000600910 SHANK2Q9UPX8 1470 aa30.97■■■□□ 2.55
PNKP-215ENST00000600910 C9orf84Q5VXU9 1444 aa30.96■■■□□ 2.55
PNKP-215ENST00000600910 CHIC2Q9UKJ5 165 aa30.95■■■□□ 2.55
PNKP-215ENST00000600910 SPAG9O60271 1321 aaKnown RBP30.94■■■□□ 2.54
PNKP-215ENST00000600910 MAST1Q9Y2H9 1570 aa30.93■■■□□ 2.54
PNKP-215ENST00000600910 ZMYM4Q5VZL5 1548 aa30.9■■■□□ 2.54
PNKP-215ENST00000600910 ZFYVE16Q7Z3T8 1539 aa30.9■■■□□ 2.54
PNKP-215ENST00000600910 HECW2Q9P2P5 1572 aa30.89■■■□□ 2.54
PNKP-215ENST00000600910 INO80Q9ULG1 1556 aaPredicted RBP30.89■■■□□ 2.54
PNKP-215ENST00000600910 ATP7AQ04656 1500 aa30.88■■■□□ 2.53
PNKP-215ENST00000600910 MYT1LQ9UL68 1186 aa30.88■■■□□ 2.53
PNKP-215ENST00000600910 RTEL1-TNFRSF6BF6WH68 1400 aa30.88■■■□□ 2.53
PNKP-215ENST00000600910 MLH3Q9UHC1 1453 aa30.88■■■□□ 2.53
PNKP-215ENST00000600910 ADGBQ8N7X0 1667 aa30.88■■■□□ 2.53
PNKP-215ENST00000600910 PCGF6Q9BYE7 350 aa30.87■■■□□ 2.53
PNKP-215ENST00000600910 ADGRL2O95490 1459 aa30.87■■■□□ 2.53
PNKP-215ENST00000600910 KIDINS220Q9ULH0 1771 aa30.86■■■□□ 2.53
PNKP-215ENST00000600910 ROCK1Q13464 1354 aa30.84■■■□□ 2.53
PNKP-215ENST00000600910 ANKRD30AQ9BXX3 1397 aa30.83■■■□□ 2.53
PNKP-215ENST00000600910 NCOA1Q15788 1441 aa30.83■■■□□ 2.53
PNKP-215ENST00000600910 PLXNC1O60486 1568 aa30.81■■■□□ 2.52
PNKP-215ENST00000600910 MAGI2Q86UL8 1455 aa30.81■■■□□ 2.52
PNKP-215ENST00000600910 RRP7BPQ9NSQ0 103 aa30.81■■■□□ 2.52
PNKP-215ENST00000600910 YEATS2Q9ULM3 1422 aa30.78■■■□□ 2.52
PNKP-215ENST00000600910 ABCA6Q8N139 1617 aa30.77■■■□□ 2.52
PNKP-215ENST00000600910 KIF15Q9NS87 1388 aa30.77■■■□□ 2.52
PNKP-215ENST00000600910 DIP2CQ9Y2E4 1556 aa30.74■■■□□ 2.51
PNKP-215ENST00000600910 HFM1A2PYH4 1435 aa30.74■■■□□ 2.51
PNKP-215ENST00000600910 NAIPQ13075 1403 aa30.72■■■□□ 2.51
PNKP-215ENST00000600910 ARHGEF40Q8TER5 1519 aa30.71■■■□□ 2.51
PNKP-215ENST00000600910 GCC2Q8IWJ2 1684 aa30.7■■■□□ 2.51
PNKP-215ENST00000600910 DUOX2Q9NRD8 1548 aa30.69■■■□□ 2.5
PNKP-215ENST00000600910 ATP10AO60312 1499 aa30.66■■■□□ 2.5
PNKP-215ENST00000600910 A2MP01023 1474 aa30.66■■■□□ 2.5
PNKP-215ENST00000600910 SETD5Q9C0A6 1442 aa30.65■■■□□ 2.5
PNKP-215ENST00000600910 DHX29Q7Z478 1369 aaKnown RBP30.64■■■□□ 2.5
PNKP-215ENST00000600910 ANKRD50Q9ULJ7 1429 aa30.64■■■□□ 2.5
PNKP-215ENST00000600910 ERBINQ96RT1 1412 aa30.62■■■□□ 2.49
PNKP-215ENST00000600910 REREQ9P2R6 1566 aa30.59■■■□□ 2.49
PNKP-215ENST00000600910 RAB3GAP2Q9H2M9 1393 aa30.58■■■□□ 2.49
PNKP-215ENST00000600910 EIF2AK4Q9P2K8 1649 aaKnown RBP30.54■■■□□ 2.48
PNKP-215ENST00000600910 SIGLEC1Q9BZZ2 1709 aa30.53■■■□□ 2.48
PNKP-215ENST00000600910 KIF3BO15066 747 aa30.51■■■□□ 2.48
PNKP-215ENST00000600910 AGLP35573 1532 aa30.49■■■□□ 2.47
PNKP-215ENST00000600910 BCORL1Q5H9F3 1711 aa30.48■■■□□ 2.47
PNKP-215ENST00000600910 HRCP23327 699 aa30.45■■■□□ 2.47
PNKP-215ENST00000600910 ARID4BQ4LE39 1312 aaPredicted RBP30.43■■■□□ 2.46
PNKP-215ENST00000600910 UNC13BO14795 1591 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms