RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 PLEKHD1A6NEE1 506 aa22.42■■□□□ 1.18
CAPN12-202ENST00000593700 RRBP1Q9P2E9 1410 aaKnown RBP22.38■■□□□ 1.17
CAPN12-202ENST00000593700 ZBTB22O15209 634 aa22.36■■□□□ 1.17
CAPN12-202ENST00000593700 MYOM3Q5VTT5 1437 aa22.35■■□□□ 1.17
CAPN12-202ENST00000593700 PHLDB1Q86UU1 1377 aa22.34■■□□□ 1.17
CAPN12-202ENST00000593700 CDC42BPAQ5VT25 1732 aa22.34■■□□□ 1.17
CAPN12-202ENST00000593700 MYO5CQ9NQX4 1742 aa22.34■■□□□ 1.17
CAPN12-202ENST00000593700 PCGF6Q9BYE7 350 aa22.33■■□□□ 1.17
CAPN12-202ENST00000593700 MAP3K4Q9Y6R4 1608 aa22.32■■□□□ 1.16
CAPN12-202ENST00000593700 KCNH8Q96L42 1107 aa22.32■■□□□ 1.16
CAPN12-202ENST00000593700 TEX14Q8IWB6 1497 aa22.31■■□□□ 1.16
CAPN12-202ENST00000593700 CCNB3Q8WWL7 1395 aa22.31■■□□□ 1.16
CAPN12-202ENST00000593700 PTPN23Q9H3S7 1636 aa22.31■■□□□ 1.16
CAPN12-202ENST00000593700 FGD6Q6ZV73 1430 aa22.3■■□□□ 1.16
CAPN12-202ENST00000593700 PREX2Q70Z35 1606 aa22.29■■□□□ 1.16
CAPN12-202ENST00000593700 ABCA9Q8IUA7 1624 aa22.29■■□□□ 1.16
CAPN12-202ENST00000593700 CD109Q6YHK3 1445 aa22.28■■□□□ 1.16
CAPN12-202ENST00000593700 MIA2Q96PC5 1412 aa22.28■■□□□ 1.16
CAPN12-202ENST00000593700 TSPOAP1O95153 1857 aa22.26■■□□□ 1.15
CAPN12-202ENST00000593700 TTC37Q6PGP7 1564 aa22.25■■□□□ 1.15
CAPN12-202ENST00000593700 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.25■■□□□ 1.153e-6■■□□□ 12.8
CAPN12-202ENST00000593700 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.23■■□□□ 1.15
CAPN12-202ENST00000593700 CDC42BPBQ9Y5S2 1711 aa22.22■■□□□ 1.15
CAPN12-202ENST00000593700 TCOF1Q13428 1488 aaKnown RBP22.22■■□□□ 1.15
CAPN12-202ENST00000593700 PPRC1Q5VV67 1664 aaKnown RBP22.2■■□□□ 1.15
CAPN12-202ENST00000593700 GPATCH8Q9UKJ3 1502 aaKnown RBP22.18■■□□□ 1.14
CAPN12-202ENST00000593700 ARAP3Q8WWN8 1544 aa22.16■■□□□ 1.14
CAPN12-202ENST00000593700 FAM50AQ14320 339 aaKnown RBP22.15■■□□□ 1.14
CAPN12-202ENST00000593700 CFAP74Q9C0B2 1584 aa22.15■■□□□ 1.14
CAPN12-202ENST00000593700 NEO1Q92859 1461 aa22.15■■□□□ 1.14
CAPN12-202ENST00000593700 ARHGAP5Q13017 1502 aa22.14■■□□□ 1.13
CAPN12-202ENST00000593700 CAMSAP2Q08AD1 1489 aa22.14■■□□□ 1.13
CAPN12-202ENST00000593700 DNMT1P26358 1616 aaKnown RBP22.13■■□□□ 1.13
CAPN12-202ENST00000593700 RNF216Q9NWF9 866 aaPredicted RBP22.13■■□□□ 1.13
CAPN12-202ENST00000593700 CROCC2H7BZ55 1655 aa22.13■■□□□ 1.13
CAPN12-202ENST00000593700 KDM6BO15054 1643 aa22.12■■□□□ 1.13
CAPN12-202ENST00000593700 PLCH2O75038 1416 aa22.1■■□□□ 1.13
CAPN12-202ENST00000593700 CFDP1Q9UEE9 299 aaPredicted RBP22.1■■□□□ 1.13
CAPN12-202ENST00000593700 ADGBQ8N7X0 1667 aa22.09■■□□□ 1.13
CAPN12-202ENST00000593700 PLEKHH2Q8IVE3 1493 aa22.08■■□□□ 1.12
CAPN12-202ENST00000593700 SAMD9LQ8IVG5 1584 aa22.08■■□□□ 1.12
CAPN12-202ENST00000593700 FOXD4L1Q9NU39 408 aa22.06■■□□□ 1.12
CAPN12-202ENST00000593700 FANCAO15360 1455 aa22.06■■□□□ 1.12
CAPN12-202ENST00000593700 ARHGEF5Q12774 1597 aa22.05■■□□□ 1.12
CAPN12-202ENST00000593700 EFCAB2Q5VUJ9 269 aa22.05■■□□□ 1.12
CAPN12-202ENST00000593700 GCC2Q8IWJ2 1684 aa22.03■■□□□ 1.12
CAPN12-202ENST00000593700 AKNAQ7Z591 1439 aa22.01■■□□□ 1.11
CAPN12-202ENST00000593700 DAPK1P53355 1430 aa22■■□□□ 1.11
CAPN12-202ENST00000593700 ABCC1P33527 1531 aa22■■□□□ 1.11
CAPN12-202ENST00000593700 ITGAEP38570 1179 aa21.99■■□□□ 1.11
CAPN12-202ENST00000593700 ZNF777Q9ULD5 760 aaPredicted RBP21.99■■□□□ 1.11
CAPN12-202ENST00000593700 SHANK2Q9UPX8 1470 aa21.98■■□□□ 1.11
CAPN12-202ENST00000593700 SYCP2Q9BX26 1530 aa21.98■■□□□ 1.11
CAPN12-202ENST00000593700 DENND4BO75064 1496 aaPredicted RBP21.96■■□□□ 1.11
CAPN12-202ENST00000593700 CCDC141Q6ZP82 1450 aa21.96■■□□□ 1.11
CAPN12-202ENST00000593700 KIAA1107Q9UPP5 1409 aa21.95■■□□□ 1.1
CAPN12-202ENST00000593700 ADGRL1O94910 1474 aa21.95■■□□□ 1.1
CAPN12-202ENST00000593700 COL17A1Q9UMD9 1497 aaPredicted RBP21.94■■□□□ 1.1
CAPN12-202ENST00000593700 MAST1Q9Y2H9 1570 aa21.92■■□□□ 1.1
CAPN12-202ENST00000593700 ABCC5O15440 1437 aa21.91■■□□□ 1.1
CAPN12-202ENST00000593700 RSPH4AQ5TD94 716 aa21.91■■□□□ 1.1
CAPN12-202ENST00000593700 DMRT2Q9Y5R5 561 aa21.91■■□□□ 1.1
CAPN12-202ENST00000593700 ZNF644Q9H582 1327 aaPredicted RBP21.9■■□□□ 1.1
CAPN12-202ENST00000593700 HFM1A2PYH4 1435 aa21.89■■□□□ 1.1
CAPN12-202ENST00000593700 SCAPERQ9BY12 1400 aa21.89■■□□□ 1.1
CAPN12-202ENST00000593700 ROCK1Q13464 1354 aa21.89■■□□□ 1.1
CAPN12-202ENST00000593700 ADGRL2O95490 1459 aa21.89■■□□□ 1.09
CAPN12-202ENST00000593700 MBD5Q9P267 1494 aa21.88■■□□□ 1.09
CAPN12-202ENST00000593700 SETD5Q9C0A6 1442 aa21.88■■□□□ 1.09
CAPN12-202ENST00000593700 RICTORQ6R327 1708 aa21.87■■□□□ 1.09
CAPN12-202ENST00000593700 ZNF518AQ6AHZ1 1483 aa21.87■■□□□ 1.09
CAPN12-202ENST00000593700 PTPRKQ15262 1439 aa21.87■■□□□ 1.09
CAPN12-202ENST00000593700 POGZQ7Z3K3 1410 aa21.87■■□□□ 1.09
CAPN12-202ENST00000593700 MAGI2Q86UL8 1455 aa21.86■■□□□ 1.09
CAPN12-202ENST00000593700 C9orf84Q5VXU9 1444 aa21.86■■□□□ 1.09
CAPN12-202ENST00000593700 PLXNC1O60486 1568 aa21.86■■□□□ 1.09
CAPN12-202ENST00000593700 ZMYM4Q5VZL5 1548 aa21.85■■□□□ 1.09
CAPN12-202ENST00000593700 TSPY4P0CV99 314 aa21.83■■□□□ 1.09
CAPN12-202ENST00000593700 TSPY10P0CW01 314 aa21.83■■□□□ 1.09
CAPN12-202ENST00000593700 ANKRD30AQ9BXX3 1397 aa21.83■■□□□ 1.08
CAPN12-202ENST00000593700 FRMPD1Q5SYB0 1578 aa21.82■■□□□ 1.08
CAPN12-202ENST00000593700 RAPGEF3O95398 923 aa21.82■■□□□ 1.08
CAPN12-202ENST00000593700 NAIPQ13075 1403 aa21.8■■□□□ 1.08
CAPN12-202ENST00000593700 RAB3GAP2Q9H2M9 1393 aa21.8■■□□□ 1.08
CAPN12-202ENST00000593700 ARHGEF12Q9NZN5 1544 aa21.8■■□□□ 1.08
CAPN12-202ENST00000593700 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
CAPN12-202ENST00000593700 KDM5CP41229 1560 aa21.79■■□□□ 1.08
CAPN12-202ENST00000593700 INO80Q9ULG1 1556 aaPredicted RBP21.79■■□□□ 1.08
CAPN12-202ENST00000593700 HNRNPMP52272 730 aaKnown RBP eCLIP21.79■■□□□ 1.08
CAPN12-202ENST00000593700 ZFYVE16Q7Z3T8 1539 aa21.77■■□□□ 1.08
CAPN12-202ENST00000593700 HOXD11P31277 338 aaPredicted RBP21.77■■□□□ 1.08
CAPN12-202ENST00000593700 CHIC2Q9UKJ5 165 aa21.77■■□□□ 1.08
CAPN12-202ENST00000593700 NCOA1Q15788 1441 aa21.76■■□□□ 1.07
CAPN12-202ENST00000593700 ATP7AQ04656 1500 aa21.75■■□□□ 1.07
CAPN12-202ENST00000593700 ARHGEF40Q8TER5 1519 aa21.75■■□□□ 1.07
CAPN12-202ENST00000593700 HECW2Q9P2P5 1572 aa21.75■■□□□ 1.07
CAPN12-202ENST00000593700 HRCP23327 699 aa21.74■■□□□ 1.07
CAPN12-202ENST00000593700 MLH3Q9UHC1 1453 aa21.74■■□□□ 1.07
CAPN12-202ENST00000593700 RTEL1-TNFRSF6BF6WH68 1400 aa21.73■■□□□ 1.07
CAPN12-202ENST00000593700 TRAPPC8Q9Y2L5 1435 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms