RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 NISCHQ9Y2I1 1504 aa33.89■■■■□ 3.02
CAPN12-202ENST00000593700 CHIC1Q5VXU3 224 aa32.45■■■□□ 2.79
CAPN12-202ENST00000593700 AEBP2Q6ZN18 517 aaPredicted RBP32.35■■■□□ 2.77
CAPN12-202ENST00000593700 CCDC180Q9P1Z9 1646 aa30.03■■■□□ 2.4
CAPN12-202ENST00000593700 ABCC9O60706 1549 aa29.04■■■□□ 2.24
CAPN12-202ENST00000593700 PHF23Q9BUL5 403 aaPredicted RBP28.65■■■□□ 2.18
CAPN12-202ENST00000593700 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.14
CAPN12-202ENST00000593700 NACADO15069 1562 aa28.2■■■□□ 2.1
CAPN12-202ENST00000593700 RB1CC1Q8TDY2 1594 aa28.16■■■□□ 2.1
CAPN12-202ENST00000593700 MYO15BQ96JP2 1530 aa28.14■■■□□ 2.1
CAPN12-202ENST00000593700 DCAF1Q9Y4B6 1507 aa28.14■■■□□ 2.1
CAPN12-202ENST00000593700 DCAF8L2P0C7V8 631 aa28.02■■■□□ 2.08
CAPN12-202ENST00000593700 UNC13AQ9UPW8 1703 aa27.4■■□□□ 1.98
CAPN12-202ENST00000593700 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
CAPN12-202ENST00000593700 SENP3Q9H4L4 574 aaPredicted RBP27.27■■□□□ 1.96
CAPN12-202ENST00000593700 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
CAPN12-202ENST00000593700 BICRAQ9NZM4 1560 aa27.18■■□□□ 1.94
CAPN12-202ENST00000593700 PABPN1Q86U42 306 aaKnown RBP eCLIP27.11■■□□□ 1.933e-7■■■■□ 23
CAPN12-202ENST00000593700 PLPPR3Q6T4P5 718 aa26.78■■□□□ 1.88
CAPN12-202ENST00000593700 EIF4G1Q04637 1599 aaKnown RBP26.5■■□□□ 1.83
CAPN12-202ENST00000593700 DNAJC5BQ9UF47 199 aa26.39■■□□□ 1.82
CAPN12-202ENST00000593700 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
CAPN12-202ENST00000593700 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
CAPN12-202ENST00000593700 CECR2Q9BXF3 1484 aa26.21■■□□□ 1.79
CAPN12-202ENST00000593700 SMARCA4P51532 1647 aa26.21■■□□□ 1.79
CAPN12-202ENST00000593700 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
CAPN12-202ENST00000593700 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
CAPN12-202ENST00000593700 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
CAPN12-202ENST00000593700 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
CAPN12-202ENST00000593700 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
CAPN12-202ENST00000593700 PEG3Q9GZU2 1588 aa25.96■■□□□ 1.75
CAPN12-202ENST00000593700 ATAD2BQ9ULI0 1458 aa25.96■■□□□ 1.75
CAPN12-202ENST00000593700 WIZO95785 1651 aa25.95■■□□□ 1.74
CAPN12-202ENST00000593700 HMGXB3Q12766 1538 aa25.89■■□□□ 1.74
CAPN12-202ENST00000593700 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
CAPN12-202ENST00000593700 TOP2AP11388 1531 aaKnown RBP25.75■■□□□ 1.71
CAPN12-202ENST00000593700 CCDC88BA6NC98 1476 aa25.32■■□□□ 1.64
CAPN12-202ENST00000593700 LAMC3Q9Y6N6 1575 aa25.29■■□□□ 1.64
CAPN12-202ENST00000593700 FOXD1Q16676 465 aa25.22■■□□□ 1.63
CAPN12-202ENST00000593700 CADPSQ9ULU8 1353 aa25.21■■□□□ 1.63
CAPN12-202ENST00000593700 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
CAPN12-202ENST00000593700 NESP48681 1621 aa25.14■■□□□ 1.61
CAPN12-202ENST00000593700 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
CAPN12-202ENST00000593700 ADRA2BP18089 450 aa25.12■■□□□ 1.61
CAPN12-202ENST00000593700 ERCC6Q03468 1493 aa25.12■■□□□ 1.61
CAPN12-202ENST00000593700 CFTRP13569 1480 aa25.09■■□□□ 1.61
CAPN12-202ENST00000593700 PPP6R1Q9UPN7 881 aa25■■□□□ 1.59
CAPN12-202ENST00000593700 KIF21AQ7Z4S6 1674 aa24.91■■□□□ 1.58
CAPN12-202ENST00000593700 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.58
CAPN12-202ENST00000593700 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.57
CAPN12-202ENST00000593700 CUX2O14529 1486 aa24.86■■□□□ 1.57
CAPN12-202ENST00000593700 THOC2Q8NI27 1593 aaKnown RBP24.81■■□□□ 1.56
CAPN12-202ENST00000593700 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
CAPN12-202ENST00000593700 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
CAPN12-202ENST00000593700 WDR62O43379 1518 aa24.71■■□□□ 1.55
CAPN12-202ENST00000593700 WRNQ14191 1432 aaPredicted RBP eCLIP24.63■■□□□ 1.53
CAPN12-202ENST00000593700 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
CAPN12-202ENST00000593700 URB2Q14146 1524 aaKnown RBP24.58■■□□□ 1.53
CAPN12-202ENST00000593700 TRIM41Q8WV44 630 aa24.57■■□□□ 1.52
CAPN12-202ENST00000593700 TOP2BQ02880 1626 aa24.57■■□□□ 1.52
CAPN12-202ENST00000593700 SYNJ1O43426 1573 aa24.55■■□□□ 1.52
CAPN12-202ENST00000593700 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
CAPN12-202ENST00000593700 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
CAPN12-202ENST00000593700 CUX1P39880 1505 aa24.46■■□□□ 1.51
CAPN12-202ENST00000593700 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
CAPN12-202ENST00000593700 POLA1P09884 1462 aaPredicted RBP24.3■■□□□ 1.48
CAPN12-202ENST00000593700 KCNA4P22459 653 aa24.29■■□□□ 1.48
CAPN12-202ENST00000593700 FGD5Q6ZNL6 1462 aa24.27■■□□□ 1.48
CAPN12-202ENST00000593700 SOGA1O94964 1423 aa24.23■■□□□ 1.47
CAPN12-202ENST00000593700 EEA1Q15075 1411 aa24.23■■□□□ 1.47
CAPN12-202ENST00000593700 WDR97A6NE52 1622 aa24.21■■□□□ 1.47
CAPN12-202ENST00000593700 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
CAPN12-202ENST00000593700 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
CAPN12-202ENST00000593700 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
CAPN12-202ENST00000593700 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
CAPN12-202ENST00000593700 EIF4G3O43432 1585 aaKnown RBP24.09■■□□□ 1.45
CAPN12-202ENST00000593700 PIAS4Q8N2W9 510 aaPredicted RBP24.09■■□□□ 1.45
CAPN12-202ENST00000593700 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
CAPN12-202ENST00000593700 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.432e-12■■■■□ 26.1
CAPN12-202ENST00000593700 TDRD9Q8NDG6 1382 aaKnown RBP24■■□□□ 1.43
CAPN12-202ENST00000593700 FAM9AQ8IZU1 332 aaPredicted RBP23.99■■□□□ 1.43
CAPN12-202ENST00000593700 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
CAPN12-202ENST00000593700 RUSC2Q8N2Y8 1516 aa23.98■■□□□ 1.43
CAPN12-202ENST00000593700 GRIN2BQ13224 1484 aa23.97■■□□□ 1.43
CAPN12-202ENST00000593700 GAPVD1Q14C86 1478 aa23.96■■□□□ 1.43
CAPN12-202ENST00000593700 KIF21BO75037 1637 aa23.95■■□□□ 1.43
CAPN12-202ENST00000593700 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
CAPN12-202ENST00000593700 CUL7Q14999 1698 aa23.92■■□□□ 1.42
CAPN12-202ENST00000593700 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
CAPN12-202ENST00000593700 CSRNP3Q8WYN3 585 aa23.9■■□□□ 1.42
CAPN12-202ENST00000593700 ERICH3Q5RHP9 1530 aa23.86■■□□□ 1.41
CAPN12-202ENST00000593700 SNAPC4Q5SXM2 1469 aa23.84■■□□□ 1.41
CAPN12-202ENST00000593700 GOLGA3Q08378 1498 aa23.83■■□□□ 1.41
CAPN12-202ENST00000593700 EHMT2Q96KQ7 1210 aa23.82■■□□□ 1.4
CAPN12-202ENST00000593700 OSCARQ8IYS5 282 aa23.81■■□□□ 1.4
CAPN12-202ENST00000593700 DNAJC5Q9H3Z4 198 aa23.8■■□□□ 1.4
CAPN12-202ENST00000593700 SYNJ2O15056 1496 aa23.79■■□□□ 1.4
CAPN12-202ENST00000593700 PRXQ9BXM0 1461 aa23.76■■□□□ 1.39
CAPN12-202ENST00000593700 CHD1O14646 1710 aa23.74■■□□□ 1.39
CAPN12-202ENST00000593700 PPP4R3CPQ6ZMV5 832 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms