RNA–Protein interactions for RNA: ENST00000593101.5

PRKCSH-219, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-219ENST00000593101 CDC42BPBQ9Y5S2 1711 aa23.76■■□□□ 1.39
PRKCSH-219ENST00000593101 TSPOAP1O95153 1857 aa23.75■■□□□ 1.39
PRKCSH-219ENST00000593101 PREX2Q70Z35 1606 aa23.75■■□□□ 1.39
PRKCSH-219ENST00000593101 MIA2Q96PC5 1412 aa23.75■■□□□ 1.39
PRKCSH-219ENST00000593101 FGD6Q6ZV73 1430 aa23.74■■□□□ 1.39
PRKCSH-219ENST00000593101 ARAP3Q8WWN8 1544 aa23.73■■□□□ 1.39
PRKCSH-219ENST00000593101 FAM50AQ14320 339 aaKnown RBP23.72■■□□□ 1.39
PRKCSH-219ENST00000593101 FANCAO15360 1455 aa23.72■■□□□ 1.39
PRKCSH-219ENST00000593101 ZNF644Q9H582 1327 aaPredicted RBP23.71■■□□□ 1.39
PRKCSH-219ENST00000593101 TEX14Q8IWB6 1497 aa23.69■■□□□ 1.38
PRKCSH-219ENST00000593101 AKNAQ7Z591 1439 aa23.67■■□□□ 1.38
PRKCSH-219ENST00000593101 PTPN23Q9H3S7 1636 aa23.66■■□□□ 1.38
PRKCSH-219ENST00000593101 NEO1Q92859 1461 aa23.66■■□□□ 1.38
PRKCSH-219ENST00000593101 RRBP1Q9P2E9 1410 aaKnown RBP23.66■■□□□ 1.38
PRKCSH-219ENST00000593101 CFAP74Q9C0B2 1584 aa23.65■■□□□ 1.38
PRKCSH-219ENST00000593101 PPRC1Q5VV67 1664 aaKnown RBP23.65■■□□□ 1.38
PRKCSH-219ENST00000593101 HNRNPMP52272 730 aaKnown RBP eCLIP23.65■■□□□ 1.38
PRKCSH-219ENST00000593101 CAMSAP2Q08AD1 1489 aa23.63■■□□□ 1.37
PRKCSH-219ENST00000593101 SAMD9LQ8IVG5 1584 aa23.63■■□□□ 1.37
PRKCSH-219ENST00000593101 TCOF1Q13428 1488 aaKnown RBP23.62■■□□□ 1.37
PRKCSH-219ENST00000593101 PLEKHH2Q8IVE3 1493 aa23.62■■□□□ 1.37
PRKCSH-219ENST00000593101 ADGRL1O94910 1474 aa23.61■■□□□ 1.37
PRKCSH-219ENST00000593101 SCAPERQ9BY12 1400 aa23.6■■□□□ 1.37
PRKCSH-219ENST00000593101 TRIM26Q12899 539 aaPredicted RBP23.6■■□□□ 1.37
PRKCSH-219ENST00000593101 RSPH4AQ5TD94 716 aa23.6■■□□□ 1.37
PRKCSH-219ENST00000593101 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.6■■□□□ 1.37
PRKCSH-219ENST00000593101 KIAA1107Q9UPP5 1409 aa23.59■■□□□ 1.37
PRKCSH-219ENST00000593101 ITGAEP38570 1179 aa23.58■■□□□ 1.37
PRKCSH-219ENST00000593101 ABCC1P33527 1531 aa23.56■■□□□ 1.36
PRKCSH-219ENST00000593101 SYCP2Q9BX26 1530 aa23.55■■□□□ 1.36
PRKCSH-219ENST00000593101 ARHGEF12Q9NZN5 1544 aa23.54■■□□□ 1.36
PRKCSH-219ENST00000593101 TSPY4P0CV99 314 aa23.54■■□□□ 1.36
PRKCSH-219ENST00000593101 TSPY10P0CW01 314 aa23.54■■□□□ 1.36
PRKCSH-219ENST00000593101 AFAP1Q8N556 730 aa23.53■■□□□ 1.36
PRKCSH-219ENST00000593101 DENND4BO75064 1496 aaPredicted RBP23.53■■□□□ 1.36
PRKCSH-219ENST00000593101 MBD5Q9P267 1494 aa23.53■■□□□ 1.36
PRKCSH-219ENST00000593101 RAPGEF3O95398 923 aa23.52■■□□□ 1.36
PRKCSH-219ENST00000593101 TRAPPC8Q9Y2L5 1435 aa23.51■■□□□ 1.35
PRKCSH-219ENST00000593101 MYT1LQ9UL68 1186 aa23.5■■□□□ 1.35
PRKCSH-219ENST00000593101 ARHGEF5Q12774 1597 aa23.49■■□□□ 1.35
PRKCSH-219ENST00000593101 ABCC5O15440 1437 aa23.49■■□□□ 1.35
PRKCSH-219ENST00000593101 DAPK1P53355 1430 aa23.49■■□□□ 1.35
PRKCSH-219ENST00000593101 CCDC141Q6ZP82 1450 aa23.49■■□□□ 1.35
PRKCSH-219ENST00000593101 CHIC2Q9UKJ5 165 aa23.47■■□□□ 1.35
PRKCSH-219ENST00000593101 DNMT1P26358 1616 aaKnown RBP23.47■■□□□ 1.35
PRKCSH-219ENST00000593101 SPAG9O60271 1321 aaKnown RBP23.46■■□□□ 1.35
PRKCSH-219ENST00000593101 ZNF518AQ6AHZ1 1483 aa23.46■■□□□ 1.35
PRKCSH-219ENST00000593101 POGZQ7Z3K3 1410 aa23.46■■□□□ 1.35
PRKCSH-219ENST00000593101 COL17A1Q9UMD9 1497 aaPredicted RBP23.45■■□□□ 1.34
PRKCSH-219ENST00000593101 KDM6BO15054 1643 aa23.41■■□□□ 1.34
PRKCSH-219ENST00000593101 PTPRKQ15262 1439 aa23.41■■□□□ 1.34
PRKCSH-219ENST00000593101 RICTORQ6R327 1708 aa23.4■■□□□ 1.34
PRKCSH-219ENST00000593101 C9orf84Q5VXU9 1444 aa23.4■■□□□ 1.34
PRKCSH-219ENST00000593101 PCGF6Q9BYE7 350 aa23.39■■□□□ 1.33
PRKCSH-219ENST00000593101 SHANK2Q9UPX8 1470 aa23.37■■□□□ 1.33
PRKCSH-219ENST00000593101 RTEL1-TNFRSF6BF6WH68 1400 aa23.37■■□□□ 1.33
PRKCSH-219ENST00000593101 CROCC2H7BZ55 1655 aa23.37■■□□□ 1.33
PRKCSH-219ENST00000593101 KDM5CP41229 1560 aa23.36■■□□□ 1.33
PRKCSH-219ENST00000593101 RRP7BPQ9NSQ0 103 aa23.36■■□□□ 1.33
PRKCSH-219ENST00000593101 ANKRD30AQ9BXX3 1397 aa23.36■■□□□ 1.33
PRKCSH-219ENST00000593101 FRMPD1Q5SYB0 1578 aa23.35■■□□□ 1.33
PRKCSH-219ENST00000593101 MLH3Q9UHC1 1453 aa23.35■■□□□ 1.33
PRKCSH-219ENST00000593101 MAST1Q9Y2H9 1570 aa23.35■■□□□ 1.33
PRKCSH-219ENST00000593101 ROCK1Q13464 1354 aa23.32■■□□□ 1.32
PRKCSH-219ENST00000593101 ATP7AQ04656 1500 aa23.32■■□□□ 1.32
PRKCSH-219ENST00000593101 HECW2Q9P2P5 1572 aa23.31■■□□□ 1.32
PRKCSH-219ENST00000593101 MAGI2Q86UL8 1455 aa23.31■■□□□ 1.32
PRKCSH-219ENST00000593101 ZMYM4Q5VZL5 1548 aa23.31■■□□□ 1.32
PRKCSH-219ENST00000593101 NCOA1Q15788 1441 aa23.31■■□□□ 1.32
PRKCSH-219ENST00000593101 ADGRL2O95490 1459 aa23.3■■□□□ 1.32
PRKCSH-219ENST00000593101 ZFYVE16Q7Z3T8 1539 aa23.29■■□□□ 1.32
PRKCSH-219ENST00000593101 ADGBQ8N7X0 1667 aa23.29■■□□□ 1.32
PRKCSH-219ENST00000593101 INO80Q9ULG1 1556 aaPredicted RBP23.29■■□□□ 1.32
PRKCSH-219ENST00000593101 KIDINS220Q9ULH0 1771 aa23.29■■□□□ 1.32
PRKCSH-219ENST00000593101 KIF15Q9NS87 1388 aa23.27■■□□□ 1.31
PRKCSH-219ENST00000593101 YEATS2Q9ULM3 1422 aa23.25■■□□□ 1.31
PRKCSH-219ENST00000593101 PLXNC1O60486 1568 aa23.23■■□□□ 1.31
PRKCSH-219ENST00000593101 ATP10AO60312 1499 aa23.23■■□□□ 1.31
PRKCSH-219ENST00000593101 DHX29Q7Z478 1369 aaKnown RBP23.21■■□□□ 1.31
PRKCSH-219ENST00000593101 HFM1A2PYH4 1435 aa23.21■■□□□ 1.31
PRKCSH-219ENST00000593101 NAIPQ13075 1403 aa23.21■■□□□ 1.31
PRKCSH-219ENST00000593101 ABCA6Q8N139 1617 aa23.21■■□□□ 1.31
PRKCSH-219ENST00000593101 DUOX2Q9NRD8 1548 aa23.2■■□□□ 1.3
PRKCSH-219ENST00000593101 A2MP01023 1474 aa23.2■■□□□ 1.3
PRKCSH-219ENST00000593101 SETD5Q9C0A6 1442 aa23.2■■□□□ 1.3
PRKCSH-219ENST00000593101 DIP2CQ9Y2E4 1556 aa23.19■■□□□ 1.3
PRKCSH-219ENST00000593101 ANKRD50Q9ULJ7 1429 aa23.18■■□□□ 1.3
PRKCSH-219ENST00000593101 ARHGEF40Q8TER5 1519 aa23.16■■□□□ 1.3
PRKCSH-219ENST00000593101 KIF3BO15066 747 aa23.14■■□□□ 1.29
PRKCSH-219ENST00000593101 ERBINQ96RT1 1412 aa23.14■■□□□ 1.29
PRKCSH-219ENST00000593101 GCC2Q8IWJ2 1684 aa23.13■■□□□ 1.29
PRKCSH-219ENST00000593101 ARID4BQ4LE39 1312 aaPredicted RBP23.12■■□□□ 1.29
PRKCSH-219ENST00000593101 RAB3GAP2Q9H2M9 1393 aa23.12■■□□□ 1.29
PRKCSH-219ENST00000593101 HRCP23327 699 aa23.1■■□□□ 1.29
PRKCSH-219ENST00000593101 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
PRKCSH-219ENST00000593101 REREQ9P2R6 1566 aa23.09■■□□□ 1.29
PRKCSH-219ENST00000593101 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
PRKCSH-219ENST00000593101 GGT6Q6P531 493 aa23.08■■□□□ 1.29
PRKCSH-219ENST00000593101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.08■■□□□ 1.295e-11■□□□□ 10.5
PRKCSH-219ENST00000593101 MLECQ14165 292 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms