RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 MAP3K4Q9Y6R4 1608 aa16.33■□□□□ 0.2
SMAD4-214ENST00000592186 TEX14Q8IWB6 1497 aa16.33■□□□□ 0.2
SMAD4-214ENST00000592186 ARHGAP5Q13017 1502 aa16.31■□□□□ 0.2
SMAD4-214ENST00000592186 FANCAO15360 1455 aa16.3■□□□□ 0.2
SMAD4-214ENST00000592186 KIF13AQ9H1H9 1805 aa16.3■□□□□ 0.2
SMAD4-214ENST00000592186 MYO5CQ9NQX4 1742 aa16.3■□□□□ 0.2
SMAD4-214ENST00000592186 ZNF777Q9ULD5 760 aaPredicted RBP16.3■□□□□ 0.2
SMAD4-214ENST00000592186 FGD6Q6ZV73 1430 aa16.3■□□□□ 0.2
SMAD4-214ENST00000592186 NEO1Q92859 1461 aa16.29■□□□□ 0.2
SMAD4-214ENST00000592186 RSPH4AQ5TD94 716 aa16.29■□□□□ 0.2
SMAD4-214ENST00000592186 ITSN2Q9NZM3 1697 aa16.29■□□□□ 0.2
SMAD4-214ENST00000592186 PLEKHH2Q8IVE3 1493 aa16.28■□□□□ 0.2
SMAD4-214ENST00000592186 PREX2Q70Z35 1606 aa16.28■□□□□ 0.2
SMAD4-214ENST00000592186 CDC42BPAQ5VT25 1732 aa16.27■□□□□ 0.2
SMAD4-214ENST00000592186 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.27■□□□□ 0.19
SMAD4-214ENST00000592186 AKNAQ7Z591 1439 aa16.26■□□□□ 0.19
SMAD4-214ENST00000592186 KIAA1107Q9UPP5 1409 aa16.26■□□□□ 0.19
SMAD4-214ENST00000592186 CFAP74Q9C0B2 1584 aa16.25■□□□□ 0.19
SMAD4-214ENST00000592186 RRBP1Q9P2E9 1410 aaKnown RBP16.25■□□□□ 0.19
SMAD4-214ENST00000592186 CDC42BPBQ9Y5S2 1711 aa16.24■□□□□ 0.19
SMAD4-214ENST00000592186 FAM50AQ14320 339 aaKnown RBP16.24■□□□□ 0.19
SMAD4-214ENST00000592186 ZNF644Q9H582 1327 aaPredicted RBP16.24■□□□□ 0.19
SMAD4-214ENST00000592186 TCOF1Q13428 1488 aaKnown RBP16.23■□□□□ 0.19
SMAD4-214ENST00000592186 HNRNPMP52272 730 aaKnown RBP eCLIP16.21■□□□□ 0.19
SMAD4-214ENST00000592186 SCAPERQ9BY12 1400 aa16.21■□□□□ 0.19
SMAD4-214ENST00000592186 ADGRL1O94910 1474 aa16.21■□□□□ 0.19
SMAD4-214ENST00000592186 CAMSAP2Q08AD1 1489 aa16.2■□□□□ 0.18
SMAD4-214ENST00000592186 PTPN23Q9H3S7 1636 aa16.2■□□□□ 0.18
SMAD4-214ENST00000592186 TSPOAP1O95153 1857 aa16.19■□□□□ 0.18
SMAD4-214ENST00000592186 TSPY4P0CV99 314 aa16.19■□□□□ 0.18
SMAD4-214ENST00000592186 TSPY10P0CW01 314 aa16.19■□□□□ 0.18
SMAD4-214ENST00000592186 PPRC1Q5VV67 1664 aaKnown RBP16.19■□□□□ 0.18
SMAD4-214ENST00000592186 DENND4BO75064 1496 aaPredicted RBP16.19■□□□□ 0.18
SMAD4-214ENST00000592186 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
SMAD4-214ENST00000592186 SAMD9LQ8IVG5 1584 aa16.18■□□□□ 0.18
SMAD4-214ENST00000592186 MBD5Q9P267 1494 aa16.17■□□□□ 0.18
SMAD4-214ENST00000592186 ABCC1P33527 1531 aa16.16■□□□□ 0.18
SMAD4-214ENST00000592186 AFAP1Q8N556 730 aa16.16■□□□□ 0.18
SMAD4-214ENST00000592186 ZNF518AQ6AHZ1 1483 aa16.15■□□□□ 0.18
SMAD4-214ENST00000592186 ARHGEF5Q12774 1597 aa16.14■□□□□ 0.17
SMAD4-214ENST00000592186 ARHGEF12Q9NZN5 1544 aa16.14■□□□□ 0.17
SMAD4-214ENST00000592186 RAPGEF3O95398 923 aa16.14■□□□□ 0.17
SMAD4-214ENST00000592186 SYCP2Q9BX26 1530 aa16.13■□□□□ 0.17
SMAD4-214ENST00000592186 SPAG9O60271 1321 aaKnown RBP16.13■□□□□ 0.17
SMAD4-214ENST00000592186 CCDC141Q6ZP82 1450 aa16.13■□□□□ 0.17
SMAD4-214ENST00000592186 POGZQ7Z3K3 1410 aa16.13■□□□□ 0.17
SMAD4-214ENST00000592186 TRAPPC8Q9Y2L5 1435 aa16.13■□□□□ 0.17
SMAD4-214ENST00000592186 ABCC5O15440 1437 aa16.12■□□□□ 0.17
SMAD4-214ENST00000592186 DAPK1P53355 1430 aa16.11■□□□□ 0.17
SMAD4-214ENST00000592186 ITGAEP38570 1179 aa16.11■□□□□ 0.17
SMAD4-214ENST00000592186 RTEL1-TNFRSF6BF6WH68 1400 aa16.1■□□□□ 0.17
SMAD4-214ENST00000592186 MYT1LQ9UL68 1186 aa16.1■□□□□ 0.17
SMAD4-214ENST00000592186 COL17A1Q9UMD9 1497 aaPredicted RBP16.1■□□□□ 0.17
SMAD4-214ENST00000592186 MAGI2Q86UL8 1455 aa16.09■□□□□ 0.17
SMAD4-214ENST00000592186 DNMT1P26358 1616 aaKnown RBP16.08■□□□□ 0.16
SMAD4-214ENST00000592186 MLH3Q9UHC1 1453 aa16.08■□□□□ 0.16
SMAD4-214ENST00000592186 SHANK2Q9UPX8 1470 aa16.08■□□□□ 0.16
SMAD4-214ENST00000592186 KDM6BO15054 1643 aa16.07■□□□□ 0.16
SMAD4-214ENST00000592186 ROCK1Q13464 1354 aa16.06■□□□□ 0.16
SMAD4-214ENST00000592186 ANKRD30AQ9BXX3 1397 aa16.06■□□□□ 0.16
SMAD4-214ENST00000592186 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
SMAD4-214ENST00000592186 C9orf84Q5VXU9 1444 aa16.06■□□□□ 0.16
SMAD4-214ENST00000592186 KDM5CP41229 1560 aa16.05■□□□□ 0.16
SMAD4-214ENST00000592186 ZMYM4Q5VZL5 1548 aa16.03■□□□□ 0.16
SMAD4-214ENST00000592186 PTPRKQ15262 1439 aa16.03■□□□□ 0.16
SMAD4-214ENST00000592186 RICTORQ6R327 1708 aa16.03■□□□□ 0.16
SMAD4-214ENST00000592186 MAST1Q9Y2H9 1570 aa16.03■□□□□ 0.16
SMAD4-214ENST00000592186 NCOA1Q15788 1441 aa16.02■□□□□ 0.16
SMAD4-214ENST00000592186 RRP7BPQ9NSQ0 103 aa16.01■□□□□ 0.15
SMAD4-214ENST00000592186 ADGRL2O95490 1459 aa16.01■□□□□ 0.15
SMAD4-214ENST00000592186 FRMPD1Q5SYB0 1578 aa16.01■□□□□ 0.15
SMAD4-214ENST00000592186 ATP7AQ04656 1500 aa16■□□□□ 0.15
SMAD4-214ENST00000592186 ACIN1Q9UKV3 1341 aaKnown RBP16■□□□□ 0.15
SMAD4-214ENST00000592186 HECW2Q9P2P5 1572 aa15.99■□□□□ 0.15
SMAD4-214ENST00000592186 CROCC2H7BZ55 1655 aa15.98■□□□□ 0.15
SMAD4-214ENST00000592186 KIF15Q9NS87 1388 aa15.98■□□□□ 0.15
SMAD4-214ENST00000592186 ZFYVE16Q7Z3T8 1539 aa15.98■□□□□ 0.15
SMAD4-214ENST00000592186 INO80Q9ULG1 1556 aaPredicted RBP15.98■□□□□ 0.15
SMAD4-214ENST00000592186 DHX29Q7Z478 1369 aaKnown RBP15.97■□□□□ 0.15
SMAD4-214ENST00000592186 ATP10AO60312 1499 aa15.97■□□□□ 0.15
SMAD4-214ENST00000592186 PCGF6Q9BYE7 350 aa15.96■□□□□ 0.15
SMAD4-214ENST00000592186 HFM1A2PYH4 1435 aa15.95■□□□□ 0.14
SMAD4-214ENST00000592186 YEATS2Q9ULM3 1422 aa15.95■□□□□ 0.14
SMAD4-214ENST00000592186 PLXNC1O60486 1568 aa15.95■□□□□ 0.14
SMAD4-214ENST00000592186 KIDINS220Q9ULH0 1771 aa15.95■□□□□ 0.14
SMAD4-214ENST00000592186 DUOX2Q9NRD8 1548 aa15.94■□□□□ 0.14
SMAD4-214ENST00000592186 A2MP01023 1474 aa15.94■□□□□ 0.14
SMAD4-214ENST00000592186 HRCP23327 699 aa15.94■□□□□ 0.14
SMAD4-214ENST00000592186 ADGBQ8N7X0 1667 aa15.93■□□□□ 0.14
SMAD4-214ENST00000592186 NAIPQ13075 1403 aa15.93■□□□□ 0.14
SMAD4-214ENST00000592186 ANKRD50Q9ULJ7 1429 aa15.93■□□□□ 0.14
SMAD4-214ENST00000592186 SETD5Q9C0A6 1442 aa15.92■□□□□ 0.14
SMAD4-214ENST00000592186 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
SMAD4-214ENST00000592186 ERBINQ96RT1 1412 aa15.91■□□□□ 0.14
SMAD4-214ENST00000592186 ARHGEF40Q8TER5 1519 aa15.91■□□□□ 0.14
SMAD4-214ENST00000592186 REREQ9P2R6 1566 aa15.9■□□□□ 0.14
SMAD4-214ENST00000592186 DIP2CQ9Y2E4 1556 aa15.9■□□□□ 0.14
SMAD4-214ENST00000592186 ADRA2BP18089 450 aa15.9■□□□□ 0.14
SMAD4-214ENST00000592186 ABCA6Q8N139 1617 aa15.89■□□□□ 0.13
SMAD4-214ENST00000592186 KIF3BO15066 747 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms