RNA–Protein interactions for RNA: ENST00000588861.1

HDHD2-206, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

Gene HDHD2, Length 3,229 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-206ENST00000588861 SKAP1Q86WV1 359 aa12.26□□□□□ -0.45
HDHD2-206ENST00000588861 ARAP1Q96P48 1450 aa12.25□□□□□ -0.45
HDHD2-206ENST00000588861 RNF123Q5XPI4 1314 aa12.25□□□□□ -0.45
HDHD2-206ENST00000588861 AAMPQ13685 434 aa12.25□□□□□ -0.45
HDHD2-206ENST00000588861 POGKQ9P215 609 aa12.25□□□□□ -0.45
HDHD2-206ENST00000588861 CNTLNQ9NXG0 1405 aa12.24□□□□□ -0.45
HDHD2-206ENST00000588861 FGD1P98174 961 aa12.23□□□□□ -0.45
HDHD2-206ENST00000588861 PDE4CQ08493 712 aa12.23□□□□□ -0.45
HDHD2-206ENST00000588861 EIF4G2P78344 907 aaKnown RBP eCLIP12.23□□□□□ -0.45
HDHD2-206ENST00000588861 IFT140Q96RY7 1462 aa12.22□□□□□ -0.45
HDHD2-206ENST00000588861 RRP1P56182 461 aaKnown RBP12.2□□□□□ -0.46
HDHD2-206ENST00000588861 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
HDHD2-206ENST00000588861 CLCN1P35523 988 aa12.2□□□□□ -0.46
HDHD2-206ENST00000588861 AEBP2Q6ZN18 517 aaPredicted RBP12.2□□□□□ -0.46
HDHD2-206ENST00000588861 RGS3P49796 1198 aa12.19□□□□□ -0.46
HDHD2-206ENST00000588861 POLR3GLQ9BT43 218 aa12.19□□□□□ -0.46
HDHD2-206ENST00000588861 FANCD2Q9BXW9 1451 aa12.18□□□□□ -0.46
HDHD2-206ENST00000588861 ABCA5Q8WWZ7 1642 aa12.17□□□□□ -0.46
HDHD2-206ENST00000588861 ATP1B4Q9UN42 357 aaPredicted RBP12.16□□□□□ -0.46
HDHD2-206ENST00000588861 PDCL3Q9H2J4 239 aa12.15□□□□□ -0.46
HDHD2-206ENST00000588861 RCAN3Q9UKA8 241 aa12.15□□□□□ -0.47
HDHD2-206ENST00000588861 SYNJ1O43426 1573 aa12.14□□□□□ -0.47
HDHD2-206ENST00000588861 GOLGA6L3A6NEY3 463 aa12.14□□□□□ -0.47
HDHD2-206ENST00000588861 URB2Q14146 1524 aaKnown RBP12.14□□□□□ -0.47
HDHD2-206ENST00000588861 TOP2BQ02880 1626 aa12.13□□□□□ -0.47
HDHD2-206ENST00000588861 CCDC7Q96M83 1385 aa12.13□□□□□ -0.47
HDHD2-206ENST00000588861 CALD1Q05682 793 aaKnown RBP12.13□□□□□ -0.47
HDHD2-206ENST00000588861 GZF1Q9H116 711 aaPredicted RBP12.13□□□□□ -0.47
HDHD2-206ENST00000588861 SLKQ9H2G2 1235 aaPredicted RBP12.13□□□□□ -0.47
HDHD2-206ENST00000588861 XRCC6P12956 609 aaKnown RBP eCLIP12.13□□□□□ -0.47
HDHD2-206ENST00000588861 PANK2Q9BZ23 570 aa12.13□□□□□ -0.47
HDHD2-206ENST00000588861 TMC1Q8TDI8 760 aa12.12□□□□□ -0.47
HDHD2-206ENST00000588861 NCOA2Q15596 1464 aa12.11□□□□□ -0.47
HDHD2-206ENST00000588861 PHLDB1Q86UU1 1377 aa12.11□□□□□ -0.47
HDHD2-206ENST00000588861 NESP48681 1621 aa12.11□□□□□ -0.47
HDHD2-206ENST00000588861 PLIN1O60240 522 aa12.11□□□□□ -0.47
HDHD2-206ENST00000588861 PRDM4Q9UKN5 801 aa12.11□□□□□ -0.47
HDHD2-206ENST00000588861 TOPBP1Q92547 1522 aa12.1□□□□□ -0.47
HDHD2-206ENST00000588861 FAM161AQ3B820 660 aa12.1□□□□□ -0.47
HDHD2-206ENST00000588861 PBRM1Q86U86 1689 aa12.09□□□□□ -0.47
HDHD2-206ENST00000588861 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
HDHD2-206ENST00000588861 TPM2P07951 284 aa12.09□□□□□ -0.47
HDHD2-206ENST00000588861 TRIM44Q96DX7 344 aaPredicted RBP12.08□□□□□ -0.48
HDHD2-206ENST00000588861 ESPNB1AK53 854 aa12.07□□□□□ -0.48
HDHD2-206ENST00000588861 CRBNQ96SW2 442 aa12.07□□□□□ -0.48
HDHD2-206ENST00000588861 ERCC6Q03468 1493 aa12.07□□□□□ -0.48
HDHD2-206ENST00000588861 ARID3AQ99856 593 aa12.07□□□□□ -0.48
HDHD2-206ENST00000588861 SHROOM2Q13796 1616 aa12.07□□□□□ -0.48
HDHD2-206ENST00000588861 MYH16Q9H6N6 1097 aa12.06□□□□□ -0.48
HDHD2-206ENST00000588861 PDIA4P13667 645 aaKnown RBP12.05□□□□□ -0.48
HDHD2-206ENST00000588861 EIF4G3O43432 1585 aaKnown RBP12.05□□□□□ -0.48
HDHD2-206ENST00000588861 KIF7Q2M1P5 1343 aa12.05□□□□□ -0.48
HDHD2-206ENST00000588861 CENPJQ9HC77 1338 aaPredicted RBP12.05□□□□□ -0.48
HDHD2-206ENST00000588861 CLASP1Q7Z460 1538 aa12.05□□□□□ -0.48
HDHD2-206ENST00000588861 ABCA10Q8WWZ4 1543 aa12.05□□□□□ -0.48
HDHD2-206ENST00000588861 BECN1Q14457 450 aa12.04□□□□□ -0.48
HDHD2-206ENST00000588861 NCOA1Q15788 1441 aa12.04□□□□□ -0.48
HDHD2-206ENST00000588861 ERICH3Q5RHP9 1530 aa12.03□□□□□ -0.48
HDHD2-206ENST00000588861 C8orf34Q49A92 452 aa12.03□□□□□ -0.48
HDHD2-206ENST00000588861 KIAA1211Q6ZU35 1233 aa12.03□□□□□ -0.48
HDHD2-206ENST00000588861 CCDC18Q5T9S5 1454 aa12.03□□□□□ -0.48
HDHD2-206ENST00000588861 PNISRQ8TF01 805 aaKnown RBP12.03□□□□□ -0.48
HDHD2-206ENST00000588861 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
HDHD2-206ENST00000588861 ZHX1Q9UKY1 873 aaPredicted RBP12.03□□□□□ -0.48
HDHD2-206ENST00000588861 BBXQ8WY36 941 aaPredicted RBP12.02□□□□□ -0.48
HDHD2-206ENST00000588861 FAM13BQ9NYF5 915 aa12.02□□□□□ -0.48
HDHD2-206ENST00000588861 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.49
HDHD2-206ENST00000588861 KTN1Q86UP2 1357 aaKnown RBP12.01□□□□□ -0.49
HDHD2-206ENST00000588861 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
HDHD2-206ENST00000588861 TIAM1Q13009 1591 aa12.01□□□□□ -0.49
HDHD2-206ENST00000588861 CUL7Q14999 1698 aa12.01□□□□□ -0.49
HDHD2-206ENST00000588861 ERBB4Q15303 1308 aa12□□□□□ -0.49
HDHD2-206ENST00000588861 UACAQ9BZF9 1416 aa12□□□□□ -0.49
HDHD2-206ENST00000588861 LRRC9Q6ZRR7 1453 aa12□□□□□ -0.49
HDHD2-206ENST00000588861 MRE11P49959 708 aa12□□□□□ -0.49
HDHD2-206ENST00000588861 PHF23Q9BUL5 403 aaPredicted RBP12□□□□□ -0.49
HDHD2-206ENST00000588861 SPRYD3Q8NCJ5 442 aa11.99□□□□□ -0.49
HDHD2-206ENST00000588861 L3MBTL2Q969R5 705 aa11.99□□□□□ -0.49
HDHD2-206ENST00000588861 FSD2A1L4K1 749 aa11.98□□□□□ -0.49
HDHD2-206ENST00000588861 PRDM10Q9NQV6 1147 aa11.98□□□□□ -0.49
HDHD2-206ENST00000588861 CENPQQ7L2Z9 268 aaPredicted RBP11.98□□□□□ -0.49
HDHD2-206ENST00000588861 CDCA7LQ96GN5 454 aa11.98□□□□□ -0.49
HDHD2-206ENST00000588861 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
HDHD2-206ENST00000588861 KDM5BQ9UGL1 1544 aa11.97□□□□□ -0.49
HDHD2-206ENST00000588861 GRPEL1Q9HAV7 217 aa11.96□□□□□ -0.49
HDHD2-206ENST00000588861 TAOK2Q9UL54 1235 aa11.96□□□□□ -0.49
HDHD2-206ENST00000588861 P3H3Q8IVL6 736 aa11.96□□□□□ -0.49
HDHD2-206ENST00000588861 CUX1P39880 1505 aa11.96□□□□□ -0.5
HDHD2-206ENST00000588861 CANXP27824 592 aaKnown RBP11.95□□□□□ -0.5
HDHD2-206ENST00000588861 C20orf194Q5TEA3 1177 aa11.95□□□□□ -0.5
HDHD2-206ENST00000588861 ADAMTS12P58397 1594 aa11.94□□□□□ -0.5
HDHD2-206ENST00000588861 TULP1O00294 542 aaPredicted RBP11.94□□□□□ -0.5
HDHD2-206ENST00000588861 TRAK2O60296 914 aa11.94□□□□□ -0.5
HDHD2-206ENST00000588861 MAP7D2Q96T17 732 aa11.94□□□□□ -0.5
HDHD2-206ENST00000588861 MCM4P33991 863 aa11.94□□□□□ -0.5
HDHD2-206ENST00000588861 NAP1L2Q9ULW6 460 aaPredicted RBP11.94□□□□□ -0.5
HDHD2-206ENST00000588861 CHMP4BQ9H444 224 aaKnown RBP11.93□□□□□ -0.5
HDHD2-206ENST00000588861 PDE3BQ13370 1112 aa11.93□□□□□ -0.5
HDHD2-206ENST00000588861 SMAP1Q8IYB5 467 aaPredicted RBP11.92□□□□□ -0.5
HDHD2-206ENST00000588861 AQRO60306 1485 aaKnown RBP eCLIP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms