RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 KIF14Q15058 1648 aa20.4■□□□□ 0.86
DNMT1-205ENST00000585920 MAP3K4Q9Y6R4 1608 aa20.4■□□□□ 0.86
DNMT1-205ENST00000585920 CFAP43Q8NDM7 1665 aa20.39■□□□□ 0.86
DNMT1-205ENST00000585920 LRRC9Q6ZRR7 1453 aa20.39■□□□□ 0.85
DNMT1-205ENST00000585920 EHBP1L1Q8N3D4 1523 aa20.38■□□□□ 0.85
DNMT1-205ENST00000585920 TEX14Q8IWB6 1497 aa20.37■□□□□ 0.85
DNMT1-205ENST00000585920 TSPOAP1O95153 1857 aa20.37■□□□□ 0.85
DNMT1-205ENST00000585920 PLCH2O75038 1416 aa20.36■□□□□ 0.85
DNMT1-205ENST00000585920 EFCAB2Q5VUJ9 269 aa20.35■□□□□ 0.85
DNMT1-205ENST00000585920 TTC37Q6PGP7 1564 aa20.34■□□□□ 0.85
DNMT1-205ENST00000585920 CCNB3Q8WWL7 1395 aa20.34■□□□□ 0.85
DNMT1-205ENST00000585920 CFDP1Q9UEE9 299 aaPredicted RBP20.3■□□□□ 0.84
DNMT1-205ENST00000585920 PHLDB1Q86UU1 1377 aa20.3■□□□□ 0.84
DNMT1-205ENST00000585920 NCOA2Q15596 1464 aa20.3■□□□□ 0.84
DNMT1-205ENST00000585920 HOXD11P31277 338 aaPredicted RBP20.29■□□□□ 0.84
DNMT1-205ENST00000585920 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
DNMT1-205ENST00000585920 FANCAO15360 1455 aa20.29■□□□□ 0.84
DNMT1-205ENST00000585920 PPRC1Q5VV67 1664 aaKnown RBP20.29■□□□□ 0.84
DNMT1-205ENST00000585920 GPATCH8Q9UKJ3 1502 aaKnown RBP20.28■□□□□ 0.84
DNMT1-205ENST00000585920 ZNF777Q9ULD5 760 aaPredicted RBP20.28■□□□□ 0.84
DNMT1-205ENST00000585920 SUPT6HQ7KZ85 1726 aaKnown RBP20.27■□□□□ 0.84
DNMT1-205ENST00000585920 NEO1Q92859 1461 aa20.27■□□□□ 0.84
DNMT1-205ENST00000585920 ARHGAP5Q13017 1502 aa20.27■□□□□ 0.83
DNMT1-205ENST00000585920 AKNAQ7Z591 1439 aa20.26■□□□□ 0.83
DNMT1-205ENST00000585920 ARAP3Q8WWN8 1544 aa20.25■□□□□ 0.83
DNMT1-205ENST00000585920 MYO5CQ9NQX4 1742 aa20.24■□□□□ 0.83
DNMT1-205ENST00000585920 FOXD4L1Q9NU39 408 aa20.21■□□□□ 0.83
DNMT1-205ENST00000585920 CFAP74Q9C0B2 1584 aa20.2■□□□□ 0.82
DNMT1-205ENST00000585920 PREX2Q70Z35 1606 aa20.2■□□□□ 0.82
DNMT1-205ENST00000585920 SCAPERQ9BY12 1400 aa20.19■□□□□ 0.82
DNMT1-205ENST00000585920 COL17A1Q9UMD9 1497 aaPredicted RBP20.19■□□□□ 0.82
DNMT1-205ENST00000585920 RAPGEF3O95398 923 aa20.19■□□□□ 0.82
DNMT1-205ENST00000585920 KDM6BO15054 1643 aa20.19■□□□□ 0.82
DNMT1-205ENST00000585920 ADGRL1O94910 1474 aa20.18■□□□□ 0.82
DNMT1-205ENST00000585920 CDC42BPAQ5VT25 1732 aa20.18■□□□□ 0.82
DNMT1-205ENST00000585920 CDC42BPBQ9Y5S2 1711 aa20.17■□□□□ 0.82
DNMT1-205ENST00000585920 ZNF644Q9H582 1327 aaPredicted RBP20.17■□□□□ 0.82
DNMT1-205ENST00000585920 MYOM3Q5VTT5 1437 aa20.17■□□□□ 0.82
DNMT1-205ENST00000585920 DENND4BO75064 1496 aaPredicted RBP20.16■□□□□ 0.82
DNMT1-205ENST00000585920 HNRNPMP52272 730 aaKnown RBP eCLIP20.15■□□□□ 0.82
DNMT1-205ENST00000585920 ITSN2Q9NZM3 1697 aa20.14■□□□□ 0.81
DNMT1-205ENST00000585920 MIA2Q96PC5 1412 aa20.13■□□□□ 0.81
DNMT1-205ENST00000585920 PLEKHH2Q8IVE3 1493 aa20.12■□□□□ 0.81
DNMT1-205ENST00000585920 AFAP1Q8N556 730 aa20.12■□□□□ 0.81
DNMT1-205ENST00000585920 KIAA1107Q9UPP5 1409 aa20.1■□□□□ 0.81
DNMT1-205ENST00000585920 MYT1LQ9UL68 1186 aa20.1■□□□□ 0.81
DNMT1-205ENST00000585920 SAMD9LQ8IVG5 1584 aa20.09■□□□□ 0.81
DNMT1-205ENST00000585920 ARHGEF12Q9NZN5 1544 aa20.08■□□□□ 0.81
DNMT1-205ENST00000585920 RSPH4AQ5TD94 716 aa20.08■□□□□ 0.81
DNMT1-205ENST00000585920 FGD6Q6ZV73 1430 aa20.08■□□□□ 0.8
DNMT1-205ENST00000585920 POGZQ7Z3K3 1410 aa20.08■□□□□ 0.8
DNMT1-205ENST00000585920 ABCC1P33527 1531 aa20.07■□□□□ 0.8
DNMT1-205ENST00000585920 TRAPPC8Q9Y2L5 1435 aa20.07■□□□□ 0.8
DNMT1-205ENST00000585920 CAMSAP2Q08AD1 1489 aa20.06■□□□□ 0.8
DNMT1-205ENST00000585920 FAM50AQ14320 339 aaKnown RBP20.06■□□□□ 0.8
DNMT1-205ENST00000585920 ZNF518AQ6AHZ1 1483 aa20.05■□□□□ 0.8
DNMT1-205ENST00000585920 SYCP2Q9BX26 1530 aa20.05■□□□□ 0.8
DNMT1-205ENST00000585920 SPAG9O60271 1321 aaKnown RBP20.02■□□□□ 0.8
DNMT1-205ENST00000585920 TSPY4P0CV99 314 aa20.02■□□□□ 0.8
DNMT1-205ENST00000585920 TSPY10P0CW01 314 aa20.02■□□□□ 0.8
DNMT1-205ENST00000585920 MBD5Q9P267 1494 aa20.02■□□□□ 0.8
DNMT1-205ENST00000585920 FRMPD1Q5SYB0 1578 aa20■□□□□ 0.79
DNMT1-205ENST00000585920 RICTORQ6R327 1708 aa20■□□□□ 0.79
DNMT1-205ENST00000585920 PTPN23Q9H3S7 1636 aa20■□□□□ 0.79
DNMT1-205ENST00000585920 TCOF1Q13428 1488 aaKnown RBP19.99■□□□□ 0.79
DNMT1-205ENST00000585920 MAGI2Q86UL8 1455 aa19.99■□□□□ 0.79
DNMT1-205ENST00000585920 CCDC141Q6ZP82 1450 aa19.98■□□□□ 0.79
DNMT1-205ENST00000585920 ZMYM4Q5VZL5 1548 aa19.97■□□□□ 0.79
DNMT1-205ENST00000585920 MLH3Q9UHC1 1453 aa19.96■□□□□ 0.79
DNMT1-205ENST00000585920 KDM5CP41229 1560 aa19.95■□□□□ 0.78
DNMT1-205ENST00000585920 YEATS2Q9ULM3 1422 aa19.94■□□□□ 0.78
DNMT1-205ENST00000585920 ARHGEF5Q12774 1597 aa19.94■□□□□ 0.78
DNMT1-205ENST00000585920 ZFYVE16Q7Z3T8 1539 aa19.93■□□□□ 0.78
DNMT1-205ENST00000585920 SLC4A2P04920 1241 aa19.93■□□□□ 0.78
DNMT1-205ENST00000585920 ABCC5O15440 1437 aa19.93■□□□□ 0.78
DNMT1-205ENST00000585920 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.92■□□□□ 0.78
DNMT1-205ENST00000585920 RTEL1-TNFRSF6BF6WH68 1400 aa19.92■□□□□ 0.78
DNMT1-205ENST00000585920 RRBP1Q9P2E9 1410 aaKnown RBP19.92■□□□□ 0.78
DNMT1-205ENST00000585920 ITGAEP38570 1179 aa19.91■□□□□ 0.78
DNMT1-205ENST00000585920 DAPK1P53355 1430 aa19.91■□□□□ 0.78
DNMT1-205ENST00000585920 HECW2Q9P2P5 1572 aa19.91■□□□□ 0.78
DNMT1-205ENST00000585920 CHIC2Q9UKJ5 165 aa19.9■□□□□ 0.78
DNMT1-205ENST00000585920 ARID4BQ4LE39 1312 aaPredicted RBP19.9■□□□□ 0.78
DNMT1-205ENST00000585920 ATP10AO60312 1499 aa19.9■□□□□ 0.78
DNMT1-205ENST00000585920 C9orf84Q5VXU9 1444 aa19.88■□□□□ 0.77
DNMT1-205ENST00000585920 ATP7AQ04656 1500 aa19.87■□□□□ 0.77
DNMT1-205ENST00000585920 ARHGEF40Q8TER5 1519 aa19.86■□□□□ 0.77
DNMT1-205ENST00000585920 KIDINS220Q9ULH0 1771 aa19.85■□□□□ 0.77
DNMT1-205ENST00000585920 DNMT1P26358 1616 aaKnown RBP19.84■□□□□ 0.77
DNMT1-205ENST00000585920 RRP7BPQ9NSQ0 103 aa19.84■□□□□ 0.77
DNMT1-205ENST00000585920 INO80Q9ULG1 1556 aaPredicted RBP19.83■□□□□ 0.77
DNMT1-205ENST00000585920 SHANK2Q9UPX8 1470 aa19.83■□□□□ 0.76
DNMT1-205ENST00000585920 DIP2CQ9Y2E4 1556 aa19.83■□□□□ 0.76
DNMT1-205ENST00000585920 ANKRD30AQ9BXX3 1397 aa19.83■□□□□ 0.76
DNMT1-205ENST00000585920 MAST1Q9Y2H9 1570 aa19.82■□□□□ 0.76
DNMT1-205ENST00000585920 DHX29Q7Z478 1369 aaKnown RBP19.81■□□□□ 0.76
DNMT1-205ENST00000585920 ABCA6Q8N139 1617 aa19.8■□□□□ 0.76
DNMT1-205ENST00000585920 A2MP01023 1474 aa19.8■□□□□ 0.76
DNMT1-205ENST00000585920 PTPRKQ15262 1439 aa19.8■□□□□ 0.76
DNMT1-205ENST00000585920 MLECQ14165 292 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms