RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TRHP20396 242 aaPredicted RBP14.67□□□□□ -0.06
RFFL-210ENST00000582308 CFDP1Q9UEE9 299 aaPredicted RBP14.67□□□□□ -0.06
RFFL-210ENST00000582308 FGD6Q6ZV73 1430 aa14.66□□□□□ -0.06
RFFL-210ENST00000582308 ARHGAP5Q13017 1502 aa14.66□□□□□ -0.06
RFFL-210ENST00000582308 MIA2Q96PC5 1412 aa14.66□□□□□ -0.06
RFFL-210ENST00000582308 PTPN23Q9H3S7 1636 aa14.65□□□□□ -0.06
RFFL-210ENST00000582308 ZNF644Q9H582 1327 aaPredicted RBP14.64□□□□□ -0.07
RFFL-210ENST00000582308 EFCAB2Q5VUJ9 269 aa14.63□□□□□ -0.07
RFFL-210ENST00000582308 ZNF777Q9ULD5 760 aaPredicted RBP14.63□□□□□ -0.07
RFFL-210ENST00000582308 RRBP1Q9P2E9 1410 aaKnown RBP14.63□□□□□ -0.07
RFFL-210ENST00000582308 SAMD9LQ8IVG5 1584 aa14.63□□□□□ -0.07
RFFL-210ENST00000582308 FANCAO15360 1455 aa14.63□□□□□ -0.07
RFFL-210ENST00000582308 CFAP74Q9C0B2 1584 aa14.61□□□□□ -0.07
RFFL-210ENST00000582308 TCOF1Q13428 1488 aaKnown RBP14.61□□□□□ -0.07
RFFL-210ENST00000582308 CAMSAP2Q08AD1 1489 aa14.6□□□□□ -0.07
RFFL-210ENST00000582308 AKNAQ7Z591 1439 aa14.59□□□□□ -0.07
RFFL-210ENST00000582308 NEO1Q92859 1461 aa14.59□□□□□ -0.07
RFFL-210ENST00000582308 TEX14Q8IWB6 1497 aa14.58□□□□□ -0.08
RFFL-210ENST00000582308 FAM50AQ14320 339 aaKnown RBP14.58□□□□□ -0.08
RFFL-210ENST00000582308 ABCC1P33527 1531 aa14.57□□□□□ -0.08
RFFL-210ENST00000582308 ARHGEF12Q9NZN5 1544 aa14.57□□□□□ -0.08
RFFL-210ENST00000582308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.08
RFFL-210ENST00000582308 PLEKHH2Q8IVE3 1493 aa14.57□□□□□ -0.08
RFFL-210ENST00000582308 HNRNPMP52272 730 aaKnown RBP eCLIP14.56□□□□□ -0.08
RFFL-210ENST00000582308 KIAA1107Q9UPP5 1409 aa14.56□□□□□ -0.08
RFFL-210ENST00000582308 ADGRL1O94910 1474 aa14.56□□□□□ -0.08
RFFL-210ENST00000582308 SYCP2Q9BX26 1530 aa14.56□□□□□ -0.08
RFFL-210ENST00000582308 MBD5Q9P267 1494 aa14.55□□□□□ -0.08
RFFL-210ENST00000582308 SCAPERQ9BY12 1400 aa14.54□□□□□ -0.08
RFFL-210ENST00000582308 ARHGEF5Q12774 1597 aa14.54□□□□□ -0.08
RFFL-210ENST00000582308 DNMT1P26358 1616 aaKnown RBP14.53□□□□□ -0.08
RFFL-210ENST00000582308 TRIM26Q12899 539 aaPredicted RBP14.53□□□□□ -0.08
RFFL-210ENST00000582308 TRAPPC8Q9Y2L5 1435 aa14.52□□□□□ -0.08
RFFL-210ENST00000582308 RICTORQ6R327 1708 aa14.52□□□□□ -0.09
RFFL-210ENST00000582308 CROCC2H7BZ55 1655 aa14.52□□□□□ -0.09
RFFL-210ENST00000582308 ABCC5O15440 1437 aa14.51□□□□□ -0.09
RFFL-210ENST00000582308 COL17A1Q9UMD9 1497 aaPredicted RBP14.5□□□□□ -0.09
RFFL-210ENST00000582308 DAPK1P53355 1430 aa14.5□□□□□ -0.09
RFFL-210ENST00000582308 DENND4BO75064 1496 aaPredicted RBP14.5□□□□□ -0.09
RFFL-210ENST00000582308 PTPRKQ15262 1439 aa14.49□□□□□ -0.09
RFFL-210ENST00000582308 RAPGEF3O95398 923 aa14.49□□□□□ -0.09
RFFL-210ENST00000582308 ITGAEP38570 1179 aa14.49□□□□□ -0.09
RFFL-210ENST00000582308 RSPH4AQ5TD94 716 aa14.49□□□□□ -0.09
RFFL-210ENST00000582308 AFAP1Q8N556 730 aa14.49□□□□□ -0.09
RFFL-210ENST00000582308 CCDC141Q6ZP82 1450 aa14.49□□□□□ -0.09
RFFL-210ENST00000582308 POGZQ7Z3K3 1410 aa14.49□□□□□ -0.09
RFFL-210ENST00000582308 FRMPD1Q5SYB0 1578 aa14.48□□□□□ -0.09
RFFL-210ENST00000582308 KDM5CP41229 1560 aa14.47□□□□□ -0.09
RFFL-210ENST00000582308 ZNF518AQ6AHZ1 1483 aa14.46□□□□□ -0.09
RFFL-210ENST00000582308 CHIC2Q9UKJ5 165 aa14.45□□□□□ -0.1
RFFL-210ENST00000582308 MAST1Q9Y2H9 1570 aa14.45□□□□□ -0.1
RFFL-210ENST00000582308 KDM6BO15054 1643 aa14.44□□□□□ -0.1
RFFL-210ENST00000582308 SHANK2Q9UPX8 1470 aa14.44□□□□□ -0.1
RFFL-210ENST00000582308 C9orf84Q5VXU9 1444 aa14.44□□□□□ -0.1
RFFL-210ENST00000582308 TSPY4P0CV99 314 aa14.44□□□□□ -0.1
RFFL-210ENST00000582308 TSPY10P0CW01 314 aa14.44□□□□□ -0.1
RFFL-210ENST00000582308 ADGBQ8N7X0 1667 aa14.44□□□□□ -0.1
RFFL-210ENST00000582308 KIDINS220Q9ULH0 1771 aa14.44□□□□□ -0.1
RFFL-210ENST00000582308 SPAG9O60271 1321 aaKnown RBP14.43□□□□□ -0.1
RFFL-210ENST00000582308 INO80Q9ULG1 1556 aaPredicted RBP14.43□□□□□ -0.1
RFFL-210ENST00000582308 ZMYM4Q5VZL5 1548 aa14.42□□□□□ -0.1
RFFL-210ENST00000582308 HECW2Q9P2P5 1572 aa14.42□□□□□ -0.1
RFFL-210ENST00000582308 RTEL1-TNFRSF6BF6WH68 1400 aa14.41□□□□□ -0.1
RFFL-210ENST00000582308 ZFYVE16Q7Z3T8 1539 aa14.41□□□□□ -0.1
RFFL-210ENST00000582308 PCGF6Q9BYE7 350 aa14.41□□□□□ -0.1
RFFL-210ENST00000582308 ADGRL2O95490 1459 aa14.41□□□□□ -0.1
RFFL-210ENST00000582308 MLH3Q9UHC1 1453 aa14.41□□□□□ -0.1
RFFL-210ENST00000582308 ATP7AQ04656 1500 aa14.41□□□□□ -0.1
RFFL-210ENST00000582308 NCOA1Q15788 1441 aa14.4□□□□□ -0.1
RFFL-210ENST00000582308 ROCK1Q13464 1354 aa14.39□□□□□ -0.11
RFFL-210ENST00000582308 PLXNC1O60486 1568 aa14.39□□□□□ -0.11
RFFL-210ENST00000582308 ANKRD30AQ9BXX3 1397 aa14.38□□□□□ -0.11
RFFL-210ENST00000582308 RRP7BPQ9NSQ0 103 aa14.38□□□□□ -0.11
RFFL-210ENST00000582308 MAGI2Q86UL8 1455 aa14.38□□□□□ -0.11
RFFL-210ENST00000582308 ABCA6Q8N139 1617 aa14.37□□□□□ -0.11
RFFL-210ENST00000582308 MYT1LQ9UL68 1186 aa14.37□□□□□ -0.11
RFFL-210ENST00000582308 YEATS2Q9ULM3 1422 aa14.37□□□□□ -0.11
RFFL-210ENST00000582308 GCC2Q8IWJ2 1684 aa14.36□□□□□ -0.11
RFFL-210ENST00000582308 KIF15Q9NS87 1388 aa14.35□□□□□ -0.11
RFFL-210ENST00000582308 DIP2CQ9Y2E4 1556 aa14.35□□□□□ -0.11
RFFL-210ENST00000582308 NAIPQ13075 1403 aa14.35□□□□□ -0.11
RFFL-210ENST00000582308 HFM1A2PYH4 1435 aa14.34□□□□□ -0.11
RFFL-210ENST00000582308 ARHGEF40Q8TER5 1519 aa14.33□□□□□ -0.12
RFFL-210ENST00000582308 DUOX2Q9NRD8 1548 aa14.32□□□□□ -0.12
RFFL-210ENST00000582308 ATP10AO60312 1499 aa14.31□□□□□ -0.12
RFFL-210ENST00000582308 SETD5Q9C0A6 1442 aa14.31□□□□□ -0.12
RFFL-210ENST00000582308 A2MP01023 1474 aa14.31□□□□□ -0.12
RFFL-210ENST00000582308 SIGLEC1Q9BZZ2 1709 aa14.3□□□□□ -0.12
RFFL-210ENST00000582308 DHX29Q7Z478 1369 aaKnown RBP14.3□□□□□ -0.12
RFFL-210ENST00000582308 ANKRD50Q9ULJ7 1429 aa14.3□□□□□ -0.12
RFFL-210ENST00000582308 REREQ9P2R6 1566 aa14.28□□□□□ -0.12
RFFL-210ENST00000582308 RAB3GAP2Q9H2M9 1393 aa14.27□□□□□ -0.12
RFFL-210ENST00000582308 EIF2AK4Q9P2K8 1649 aaKnown RBP14.26□□□□□ -0.13
RFFL-210ENST00000582308 ERBINQ96RT1 1412 aa14.26□□□□□ -0.13
RFFL-210ENST00000582308 BCORL1Q5H9F3 1711 aa14.26□□□□□ -0.13
RFFL-210ENST00000582308 KIF3BO15066 747 aa14.24□□□□□ -0.13
RFFL-210ENST00000582308 AGLP35573 1532 aa14.24□□□□□ -0.13
RFFL-210ENST00000582308 HRCP23327 699 aa14.23□□□□□ -0.13
RFFL-210ENST00000582308 DEPDC5O75140 1603 aa14.23□□□□□ -0.13
RFFL-210ENST00000582308 RNF17Q9BXT8 1623 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms