RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 TNIKQ9UKE5 1360 aa14.51□□□□□ -0.09
CDK5RAP3-221ENST00000581662 SPDYE4A6NLX3 237 aa14.51□□□□□ -0.09
CDK5RAP3-221ENST00000581662 MADDQ8WXG6 1647 aa14.5□□□□□ -0.09
CDK5RAP3-221ENST00000581662 UACAQ9BZF9 1416 aa14.49□□□□□ -0.09
CDK5RAP3-221ENST00000581662 BCORL1Q5H9F3 1711 aa14.46□□□□□ -0.09
CDK5RAP3-221ENST00000581662 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.09
CDK5RAP3-221ENST00000581662 WDR7Q9Y4E6 1490 aa14.45□□□□□ -0.1
CDK5RAP3-221ENST00000581662 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
CDK5RAP3-221ENST00000581662 ARAP3Q8WWN8 1544 aa14.45□□□□□ -0.1
CDK5RAP3-221ENST00000581662 ZCCHC11Q5TAX3 1644 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-221ENST00000581662 CD109Q6YHK3 1445 aa14.43□□□□□ -0.1
CDK5RAP3-221ENST00000581662 PRKAR2AP13861 404 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP3-221ENST00000581662 TTBK1Q5TCY1 1321 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-221ENST00000581662 CARMIL2Q6F5E8 1435 aa14.41□□□□□ -0.1
CDK5RAP3-221ENST00000581662 CFAP43Q8NDM7 1665 aa14.41□□□□□ -0.1
CDK5RAP3-221ENST00000581662 HAX1O00165 279 aa14.4□□□□□ -0.1
CDK5RAP3-221ENST00000581662 RIMS1Q86UR5 1692 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-221ENST00000581662 DISP1Q96F81 1524 aa14.35□□□□□ -0.11
CDK5RAP3-221ENST00000581662 IQSEC2Q5JU85 1478 aa14.34□□□□□ -0.11
CDK5RAP3-221ENST00000581662 YEATS2Q9ULM3 1422 aa14.32□□□□□ -0.12
CDK5RAP3-221ENST00000581662 CHADLQ6NUI6 762 aa14.32□□□□□ -0.12
CDK5RAP3-221ENST00000581662 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
CDK5RAP3-221ENST00000581662 LTBP4Q8N2S1 1624 aa14.3□□□□□ -0.12
CDK5RAP3-221ENST00000581662 IGF1RP08069 1367 aa14.29□□□□□ -0.12
CDK5RAP3-221ENST00000581662 FRMPD1Q5SYB0 1578 aa14.29□□□□□ -0.12
CDK5RAP3-221ENST00000581662 STRCQ7RTU9 1775 aa14.28□□□□□ -0.12
CDK5RAP3-221ENST00000581662 IQGAP2Q13576 1575 aa14.27□□□□□ -0.12
CDK5RAP3-221ENST00000581662 PHLDB1Q86UU1 1377 aa14.27□□□□□ -0.12
CDK5RAP3-221ENST00000581662 ARID4BQ4LE39 1312 aaPredicted RBP14.27□□□□□ -0.12
CDK5RAP3-221ENST00000581662 ARHGEF40Q8TER5 1519 aa14.26□□□□□ -0.13
CDK5RAP3-221ENST00000581662 MED1Q15648 1581 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-221ENST00000581662 RAPGEF3O95398 923 aa14.25□□□□□ -0.13
CDK5RAP3-221ENST00000581662 PTPRTO14522 1441 aa14.24□□□□□ -0.13
CDK5RAP3-221ENST00000581662 TTC37Q6PGP7 1564 aa14.23□□□□□ -0.13
CDK5RAP3-221ENST00000581662 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-221ENST00000581662 KCNH8Q96L42 1107 aa14.22□□□□□ -0.13
CDK5RAP3-221ENST00000581662 PREX1Q8TCU6 1659 aa14.2□□□□□ -0.14
CDK5RAP3-221ENST00000581662 UGGT2Q9NYU1 1516 aa14.19□□□□□ -0.14
CDK5RAP3-221ENST00000581662 KIAA0556O60303 1618 aa14.19□□□□□ -0.14
CDK5RAP3-221ENST00000581662 NEO1Q92859 1461 aa14.18□□□□□ -0.14
CDK5RAP3-221ENST00000581662 POGZQ7Z3K3 1410 aa14.17□□□□□ -0.14
CDK5RAP3-221ENST00000581662 SIGLEC1Q9BZZ2 1709 aa14.17□□□□□ -0.14
CDK5RAP3-221ENST00000581662 FANCAO15360 1455 aa14.16□□□□□ -0.14
CDK5RAP3-221ENST00000581662 ABCA9Q8IUA7 1624 aa14.15□□□□□ -0.14
CDK5RAP3-221ENST00000581662 ABCA8O94911 1581 aa14.14□□□□□ -0.15
CDK5RAP3-221ENST00000581662 CARMIL1Q5VZK9 1371 aa14.13□□□□□ -0.15
CDK5RAP3-221ENST00000581662 EVX2Q03828 476 aa14.13□□□□□ -0.15
CDK5RAP3-221ENST00000581662 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-221ENST00000581662 KIF27Q86VH2 1401 aa14.12□□□□□ -0.15
CDK5RAP3-221ENST00000581662 FER1L4A9Z1Z3 1794 aa14.11□□□□□ -0.15
CDK5RAP3-221ENST00000581662 ARHGEF12Q9NZN5 1544 aa14.1□□□□□ -0.15
CDK5RAP3-221ENST00000581662 UHRF1BP1Q6BDS2 1440 aa14.1□□□□□ -0.15
CDK5RAP3-221ENST00000581662 AKNAQ7Z591 1439 aa14.1□□□□□ -0.15
CDK5RAP3-221ENST00000581662 FHOD3Q2V2M9 1422 aa14.09□□□□□ -0.15
CDK5RAP3-221ENST00000581662 C19orf67A6NJJ6 358 aa14.09□□□□□ -0.15
CDK5RAP3-221ENST00000581662 UBAP1LF5GYI3 381 aa14.09□□□□□ -0.15
CDK5RAP3-221ENST00000581662 ZMYM4Q5VZL5 1548 aa14.07□□□□□ -0.16
CDK5RAP3-221ENST00000581662 CREBZFQ9NS37 354 aa14.07□□□□□ -0.16
CDK5RAP3-221ENST00000581662 RICTORQ6R327 1708 aa14.07□□□□□ -0.16
CDK5RAP3-221ENST00000581662 PROM2Q8N271 834 aa14.06□□□□□ -0.16
CDK5RAP3-221ENST00000581662 HSPA1LP34931 641 aa14.05□□□□□ -0.16
CDK5RAP3-221ENST00000581662 FKBP8Q14318 412 aa14.05□□□□□ -0.16
CDK5RAP3-221ENST00000581662 NCOA1Q15788 1441 aa14.05□□□□□ -0.16
CDK5RAP3-221ENST00000581662 DENND4BO75064 1496 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-221ENST00000581662 ZFYVE16Q7Z3T8 1539 aa14.05□□□□□ -0.16
CDK5RAP3-221ENST00000581662 CEBPAP49715 358 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-221ENST00000581662 EFCAB5A4FU69 1503 aa14.03□□□□□ -0.16
CDK5RAP3-221ENST00000581662 MLECQ14165 292 aa14.02□□□□□ -0.17
CDK5RAP3-221ENST00000581662 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-221ENST00000581662 MAGI2Q86UL8 1455 aa13.99□□□□□ -0.17
CDK5RAP3-221ENST00000581662 ZNF335Q9H4Z2 1342 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-221ENST00000581662 ATP10BO94823 1461 aa13.99□□□□□ -0.17
CDK5RAP3-221ENST00000581662 SETD1BQ9UPS6 1966 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-221ENST00000581662 GOLGA3Q08378 1498 aa13.93□□□□□ -0.18
CDK5RAP3-221ENST00000581662 RGS17Q9UGC6 210 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-221ENST00000581662 HECW1Q76N89 1606 aa13.92□□□□□ -0.18
CDK5RAP3-221ENST00000581662 C9orf84Q5VXU9 1444 aa13.91□□□□□ -0.18
CDK5RAP3-221ENST00000581662 ATP10AO60312 1499 aa13.9□□□□□ -0.18
CDK5RAP3-221ENST00000581662 RAPGEF2Q9Y4G8 1499 aa13.89□□□□□ -0.19
CDK5RAP3-221ENST00000581662 ARID3CA6NKF2 412 aa13.89□□□□□ -0.19
CDK5RAP3-221ENST00000581662 CFAP74Q9C0B2 1584 aa13.88□□□□□ -0.19
CDK5RAP3-221ENST00000581662 CAMSAP1Q5T5Y3 1602 aa13.88□□□□□ -0.19
CDK5RAP3-221ENST00000581662 TRAPPC8Q9Y2L5 1435 aa13.88□□□□□ -0.19
CDK5RAP3-221ENST00000581662 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
CDK5RAP3-221ENST00000581662 C3P01024 1663 aa13.86□□□□□ -0.19
CDK5RAP3-221ENST00000581662 GABBR2O75899 941 aa13.86□□□□□ -0.19
CDK5RAP3-221ENST00000581662 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
CDK5RAP3-221ENST00000581662 MIER1Q8N108 512 aa13.86□□□□□ -0.19
CDK5RAP3-221ENST00000581662 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
CDK5RAP3-221ENST00000581662 ALKQ9UM73 1620 aa13.86□□□□□ -0.19
CDK5RAP3-221ENST00000581662 SRCAPQ6ZRS2 3230 aa13.84□□□□□ -0.19
CDK5RAP3-221ENST00000581662 TOM1O60784 492 aa13.83□□□□□ -0.2
CDK5RAP3-221ENST00000581662 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP3-221ENST00000581662 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
CDK5RAP3-221ENST00000581662 PLA2R1Q13018 1463 aa13.82□□□□□ -0.2
CDK5RAP3-221ENST00000581662 TCOF1Q13428 1488 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-221ENST00000581662 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-221ENST00000581662 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
CDK5RAP3-221ENST00000581662 PKD2Q13563 968 aa13.78□□□□□ -0.2
CDK5RAP3-221ENST00000581662 CPS1P31327 1500 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms