RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 CFAP43Q8NDM7 1665 aa20.13■□□□□ 0.81
CUEDC1-206ENST00000577830 IQGAP2Q13576 1575 aa20.11■□□□□ 0.81
CUEDC1-206ENST00000577830 PTPN23Q9H3S7 1636 aa20.11■□□□□ 0.81
CUEDC1-206ENST00000577830 PPP4R2Q9NY27 417 aa20.1■□□□□ 0.81
CUEDC1-206ENST00000577830 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
CUEDC1-206ENST00000577830 ADAMTS12P58397 1594 aa20.09■□□□□ 0.81
CUEDC1-206ENST00000577830 SAMD9Q5K651 1589 aa20.09■□□□□ 0.81
CUEDC1-206ENST00000577830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.08■□□□□ 0.81
CUEDC1-206ENST00000577830 NBR1Q14596 966 aa20.08■□□□□ 0.81
CUEDC1-206ENST00000577830 JPH4Q96JJ6 628 aa20.08■□□□□ 0.8
CUEDC1-206ENST00000577830 MAGI3Q5TCQ9 1506 aa20.06■□□□□ 0.8
CUEDC1-206ENST00000577830 KIF7Q2M1P5 1343 aa20.05■□□□□ 0.8
CUEDC1-206ENST00000577830 WDR62O43379 1518 aa20.04■□□□□ 0.8
CUEDC1-206ENST00000577830 CCDC7Q96M83 1385 aa20.04■□□□□ 0.8
CUEDC1-206ENST00000577830 CFDP1Q9UEE9 299 aaPredicted RBP20.04■□□□□ 0.8
CUEDC1-206ENST00000577830 EPRSP07814 1512 aaKnown RBP20.04■□□□□ 0.8
CUEDC1-206ENST00000577830 GRIN2AQ12879 1464 aa20.02■□□□□ 0.8
CUEDC1-206ENST00000577830 CCDC136Q96JN2 1154 aa20.02■□□□□ 0.79
CUEDC1-206ENST00000577830 TMC1Q8TDI8 760 aa20.01■□□□□ 0.79
CUEDC1-206ENST00000577830 EIF4G3O43432 1585 aaKnown RBP20.01■□□□□ 0.79
CUEDC1-206ENST00000577830 PKD2Q13563 968 aa20■□□□□ 0.79
CUEDC1-206ENST00000577830 CNTLNQ9NXG0 1405 aa20■□□□□ 0.79
CUEDC1-206ENST00000577830 KIAA0586Q9BVV6 1533 aa20■□□□□ 0.79
CUEDC1-206ENST00000577830 LRRIQ1Q96JM4 1722 aa19.99■□□□□ 0.79
CUEDC1-206ENST00000577830 NPM2Q86SE8 214 aaKnown RBP19.99■□□□□ 0.79
CUEDC1-206ENST00000577830 THOC2Q8NI27 1593 aaKnown RBP19.98■□□□□ 0.79
CUEDC1-206ENST00000577830 EHBP1L1Q8N3D4 1523 aa19.96■□□□□ 0.79
CUEDC1-206ENST00000577830 PLB1Q6P1J6 1458 aa19.96■□□□□ 0.79
CUEDC1-206ENST00000577830 KDM6BO15054 1643 aa19.95■□□□□ 0.78
CUEDC1-206ENST00000577830 PRG4Q92954 1404 aaPredicted RBP19.95■□□□□ 0.78
CUEDC1-206ENST00000577830 SUPT6HQ7KZ85 1726 aaKnown RBP19.95■□□□□ 0.78
CUEDC1-206ENST00000577830 DISP1Q96F81 1524 aa19.95■□□□□ 0.78
CUEDC1-206ENST00000577830 RGL3Q3MIN7 710 aa19.95■□□□□ 0.78
CUEDC1-206ENST00000577830 CARD11Q9BXL7 1154 aa19.94■□□□□ 0.78
CUEDC1-206ENST00000577830 HECW1Q76N89 1606 aa19.92■□□□□ 0.78
CUEDC1-206ENST00000577830 AKNAQ7Z591 1439 aa19.92■□□□□ 0.78
CUEDC1-206ENST00000577830 ZBED9Q6R2W3 1325 aa19.91■□□□□ 0.78
CUEDC1-206ENST00000577830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.78
CUEDC1-206ENST00000577830 UGGT2Q9NYU1 1516 aa19.9■□□□□ 0.78
CUEDC1-206ENST00000577830 DCAF11Q8TEB1 546 aa19.89■□□□□ 0.77
CUEDC1-206ENST00000577830 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
CUEDC1-206ENST00000577830 NUP153P49790 1475 aaKnown RBP19.89■□□□□ 0.77
CUEDC1-206ENST00000577830 PLEKHD1A6NEE1 506 aa19.88■□□□□ 0.77
CUEDC1-206ENST00000577830 DENND4BO75064 1496 aaPredicted RBP19.87■□□□□ 0.77
CUEDC1-206ENST00000577830 ANKRD30BQ9BXX2 1392 aa19.87■□□□□ 0.77
CUEDC1-206ENST00000577830 FANCIQ9NVI1 1328 aa19.86■□□□□ 0.77
CUEDC1-206ENST00000577830 KIAA0556O60303 1618 aa19.86■□□□□ 0.77
CUEDC1-206ENST00000577830 CARMIL2Q6F5E8 1435 aa19.85■□□□□ 0.77
CUEDC1-206ENST00000577830 MAGI1Q96QZ7 1491 aaPredicted RBP19.85■□□□□ 0.77
CUEDC1-206ENST00000577830 KDM5BQ9UGL1 1544 aa19.85■□□□□ 0.77
CUEDC1-206ENST00000577830 USP47Q96K76 1375 aa19.85■□□□□ 0.77
CUEDC1-206ENST00000577830 ST20-MTHFSA0A0A6YYL1 179 aa19.84■□□□□ 0.77
CUEDC1-206ENST00000577830 CEP170Q5SW79 1584 aa19.84■□□□□ 0.77
CUEDC1-206ENST00000577830 NCOA1Q15788 1441 aa19.84■□□□□ 0.77
CUEDC1-206ENST00000577830 PAK3O75914 559 aaPredicted RBP19.83■□□□□ 0.77
CUEDC1-206ENST00000577830 DAPK1P53355 1430 aa19.82■□□□□ 0.76
CUEDC1-206ENST00000577830 NUDCQ9Y266 331 aa19.82■□□□□ 0.76
CUEDC1-206ENST00000577830 ABCC5O15440 1437 aa19.81■□□□□ 0.76
CUEDC1-206ENST00000577830 NUP155O75694 1391 aa19.81■□□□□ 0.76
CUEDC1-206ENST00000577830 TSPY4P0CV99 314 aa19.81■□□□□ 0.76
CUEDC1-206ENST00000577830 TSPY10P0CW01 314 aa19.81■□□□□ 0.76
CUEDC1-206ENST00000577830 HNRNPMP52272 730 aaKnown RBP eCLIP19.8■□□□□ 0.76
CUEDC1-206ENST00000577830 ANP32AP39687 249 aaKnown RBP19.8■□□□□ 0.76
CUEDC1-206ENST00000577830 NOP58Q9Y2X3 529 aaKnown RBP19.8■□□□□ 0.76
CUEDC1-206ENST00000577830 CC2D1BQ5T0F9 858 aaKnown RBP19.79■□□□□ 0.76
CUEDC1-206ENST00000577830 DEKP35659 375 aaKnown RBP19.77■□□□□ 0.75
CUEDC1-206ENST00000577830 ERICH6BQ5W0A0 696 aa19.76■□□□□ 0.75
CUEDC1-206ENST00000577830 ARHGEF11O15085 1522 aa19.75■□□□□ 0.75
CUEDC1-206ENST00000577830 RAPGEF6Q8TEU7 1601 aa19.75■□□□□ 0.75
CUEDC1-206ENST00000577830 MIA2Q96PC5 1412 aa19.75■□□□□ 0.75
CUEDC1-206ENST00000577830 RPRD2Q5VT52 1461 aaKnown RBP19.75■□□□□ 0.75
CUEDC1-206ENST00000577830 TROQ12816 1431 aaPredicted RBP19.74■□□□□ 0.75
CUEDC1-206ENST00000577830 PTPRGP23470 1445 aa19.74■□□□□ 0.75
CUEDC1-206ENST00000577830 ZBTB47Q9UFB7 747 aaPredicted RBP19.73■□□□□ 0.75
CUEDC1-206ENST00000577830 PLIN1O60240 522 aa19.72■□□□□ 0.75
CUEDC1-206ENST00000577830 EXOC6Q8TAG9 804 aa19.72■□□□□ 0.75
CUEDC1-206ENST00000577830 RTL5Q5HYW3 569 aaPredicted RBP19.72■□□□□ 0.75
CUEDC1-206ENST00000577830 NUP160Q12769 1436 aa19.72■□□□□ 0.75
CUEDC1-206ENST00000577830 SKAP1Q86WV1 359 aa19.71■□□□□ 0.75
CUEDC1-206ENST00000577830 TCOF1Q13428 1488 aaKnown RBP19.71■□□□□ 0.75
CUEDC1-206ENST00000577830 PNISRQ8TF01 805 aaKnown RBP19.7■□□□□ 0.74
CUEDC1-206ENST00000577830 LAS1LQ9Y4W2 734 aaKnown RBP19.69■□□□□ 0.74
CUEDC1-206ENST00000577830 CDCA7LQ96GN5 454 aa19.68■□□□□ 0.74
CUEDC1-206ENST00000577830 ANKRD30AQ9BXX3 1397 aa19.67■□□□□ 0.74
CUEDC1-206ENST00000577830 NBPF1Q3BBV0 1214 aa19.66■□□□□ 0.74
CUEDC1-206ENST00000577830 GPATCH8Q9UKJ3 1502 aaKnown RBP19.66■□□□□ 0.74
CUEDC1-206ENST00000577830 TEX14Q8IWB6 1497 aa19.65■□□□□ 0.74
CUEDC1-206ENST00000577830 ROCK2O75116 1388 aaKnown RBP19.65■□□□□ 0.74
CUEDC1-206ENST00000577830 ATP10BO94823 1461 aa19.65■□□□□ 0.74
CUEDC1-206ENST00000577830 KIF14Q15058 1648 aa19.65■□□□□ 0.74
CUEDC1-206ENST00000577830 EIF5BO60841 1220 aaKnown RBP19.65■□□□□ 0.74
CUEDC1-206ENST00000577830 PLEKHG5O94827 1062 aa19.64■□□□□ 0.74
CUEDC1-206ENST00000577830 RCAN3Q9UKA8 241 aa19.64■□□□□ 0.73
CUEDC1-206ENST00000577830 CAMSAP2Q08AD1 1489 aa19.64■□□□□ 0.73
CUEDC1-206ENST00000577830 DHX29Q7Z478 1369 aaKnown RBP19.64■□□□□ 0.73
CUEDC1-206ENST00000577830 ANKRD50Q9ULJ7 1429 aa19.63■□□□□ 0.73
CUEDC1-206ENST00000577830 ROCK1Q13464 1354 aa19.63■□□□□ 0.73
CUEDC1-206ENST00000577830 MYT1LQ9UL68 1186 aa19.62■□□□□ 0.73
CUEDC1-206ENST00000577830 KIAA1107Q9UPP5 1409 aa19.62■□□□□ 0.73
CUEDC1-206ENST00000577830 SPATA31E1Q6ZUB1 1445 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms