RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 EFCAB5A4FU69 1503 aa16.97■□□□□ 0.31
HCFC1R1-206ENST00000574151 HSPA1LP34931 641 aa16.97■□□□□ 0.31
HCFC1R1-206ENST00000574151 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.31
HCFC1R1-206ENST00000574151 ARHGEF12Q9NZN5 1544 aa16.96■□□□□ 0.3
HCFC1R1-206ENST00000574151 P3H3Q8IVL6 736 aa16.95■□□□□ 0.3
HCFC1R1-206ENST00000574151 ZMYM4Q5VZL5 1548 aa16.93■□□□□ 0.3
HCFC1R1-206ENST00000574151 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
HCFC1R1-206ENST00000574151 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
HCFC1R1-206ENST00000574151 HECW1Q76N89 1606 aa16.92■□□□□ 0.3
HCFC1R1-206ENST00000574151 PIP4K2BP78356 416 aa16.91■□□□□ 0.3
HCFC1R1-206ENST00000574151 C3P01024 1663 aa16.88■□□□□ 0.29
HCFC1R1-206ENST00000574151 MAGI2Q86UL8 1455 aa16.87■□□□□ 0.29
HCFC1R1-206ENST00000574151 CFAP74Q9C0B2 1584 aa16.87■□□□□ 0.29
HCFC1R1-206ENST00000574151 NCOA1Q15788 1441 aa16.87■□□□□ 0.29
HCFC1R1-206ENST00000574151 ATP10AO60312 1499 aa16.86■□□□□ 0.29
HCFC1R1-206ENST00000574151 NCKAP5LQ9HCH0 1330 aa16.85■□□□□ 0.29
HCFC1R1-206ENST00000574151 C9orf84Q5VXU9 1444 aa16.83■□□□□ 0.28
HCFC1R1-206ENST00000574151 CAMSAP1Q5T5Y3 1602 aa16.82■□□□□ 0.28
HCFC1R1-206ENST00000574151 RAPGEF6Q8TEU7 1601 aa16.81■□□□□ 0.28
HCFC1R1-206ENST00000574151 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
HCFC1R1-206ENST00000574151 SCAPERQ9BY12 1400 aa16.8■□□□□ 0.28
HCFC1R1-206ENST00000574151 PLEKHD1A6NEE1 506 aa16.78■□□□□ 0.28
HCFC1R1-206ENST00000574151 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
HCFC1R1-206ENST00000574151 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.78■□□□□ 0.28
HCFC1R1-206ENST00000574151 TRAPPC8Q9Y2L5 1435 aa16.78■□□□□ 0.28
HCFC1R1-206ENST00000574151 TOM1O60784 492 aa16.77■□□□□ 0.28
HCFC1R1-206ENST00000574151 SUPT6HQ7KZ85 1726 aaKnown RBP16.76■□□□□ 0.27
HCFC1R1-206ENST00000574151 MYT1LQ9UL68 1186 aa16.76■□□□□ 0.27
HCFC1R1-206ENST00000574151 RGS17Q9UGC6 210 aaPredicted RBP16.72■□□□□ 0.27
HCFC1R1-206ENST00000574151 NUP153P49790 1475 aaKnown RBP16.71■□□□□ 0.27
HCFC1R1-206ENST00000574151 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
HCFC1R1-206ENST00000574151 PKD2Q13563 968 aa16.66■□□□□ 0.26
HCFC1R1-206ENST00000574151 AFAP1Q8N556 730 aa16.66■□□□□ 0.26
HCFC1R1-206ENST00000574151 PLCH2O75038 1416 aa16.63■□□□□ 0.25
HCFC1R1-206ENST00000574151 RANGAP1P46060 587 aaPredicted RBP16.63■□□□□ 0.25
HCFC1R1-206ENST00000574151 DIP2CQ9Y2E4 1556 aa16.63■□□□□ 0.25
HCFC1R1-206ENST00000574151 SAMD9Q5K651 1589 aa16.61■□□□□ 0.25
HCFC1R1-206ENST00000574151 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
HCFC1R1-206ENST00000574151 SETD1AO15047 1707 aaKnown RBP16.6■□□□□ 0.25
HCFC1R1-206ENST00000574151 POTEAQ6S8J7 498 aa16.6■□□□□ 0.25
HCFC1R1-206ENST00000574151 ABCA6Q8N139 1617 aa16.59■□□□□ 0.25
HCFC1R1-206ENST00000574151 MYO5CQ9NQX4 1742 aa16.59■□□□□ 0.25
HCFC1R1-206ENST00000574151 TCOF1Q13428 1488 aaKnown RBP16.59■□□□□ 0.25
HCFC1R1-206ENST00000574151 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
HCFC1R1-206ENST00000574151 PLA2R1Q13018 1463 aa16.58■□□□□ 0.24
HCFC1R1-206ENST00000574151 ALKQ9UM73 1620 aa16.58■□□□□ 0.24
HCFC1R1-206ENST00000574151 AGLP35573 1532 aa16.57■□□□□ 0.24
HCFC1R1-206ENST00000574151 NPATQ14207 1427 aa16.57■□□□□ 0.24
HCFC1R1-206ENST00000574151 CNTLNQ9NXG0 1405 aa16.57■□□□□ 0.24
HCFC1R1-206ENST00000574151 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
HCFC1R1-206ENST00000574151 MYO3AQ8NEV4 1616 aa16.56■□□□□ 0.24
HCFC1R1-206ENST00000574151 REREQ9P2R6 1566 aa16.56■□□□□ 0.24
HCFC1R1-206ENST00000574151 CPS1P31327 1500 aa16.56■□□□□ 0.24
HCFC1R1-206ENST00000574151 PTPRKQ15262 1439 aa16.56■□□□□ 0.24
HCFC1R1-206ENST00000574151 ZMYM3Q14202 1370 aa16.56■□□□□ 0.24
HCFC1R1-206ENST00000574151 KDM5CP41229 1560 aa16.55■□□□□ 0.24
HCFC1R1-206ENST00000574151 MROH2AA6NES4 1674 aa16.55■□□□□ 0.24
HCFC1R1-206ENST00000574151 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
HCFC1R1-206ENST00000574151 CEP170BQ9Y4F5 1589 aaPredicted RBP16.54■□□□□ 0.24
HCFC1R1-206ENST00000574151 PRXQ9BXM0 1461 aa16.54■□□□□ 0.24
HCFC1R1-206ENST00000574151 CLTCQ00610 1675 aaKnown RBP16.51■□□□□ 0.23
HCFC1R1-206ENST00000574151 POLR1AO95602 1720 aaPredicted RBP16.5■□□□□ 0.23
HCFC1R1-206ENST00000574151 CDK13Q14004 1512 aaKnown RBP16.5■□□□□ 0.23
HCFC1R1-206ENST00000574151 ARHGAP5Q13017 1502 aa16.48■□□□□ 0.23
HCFC1R1-206ENST00000574151 MLH3Q9UHC1 1453 aa16.47■□□□□ 0.23
HCFC1R1-206ENST00000574151 KIDINS220Q9ULH0 1771 aa16.45■□□□□ 0.22
HCFC1R1-206ENST00000574151 DNMT1P26358 1616 aaKnown RBP16.45■□□□□ 0.22
HCFC1R1-206ENST00000574151 ATP1B4Q9UN42 357 aaPredicted RBP16.44■□□□□ 0.22
HCFC1R1-206ENST00000574151 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
HCFC1R1-206ENST00000574151 UPF1Q92900 1129 aaKnown RBP eCLIP16.43■□□□□ 0.22
HCFC1R1-206ENST00000574151 KIF14Q15058 1648 aa16.43■□□□□ 0.22
HCFC1R1-206ENST00000574151 VWDEQ8N2E2 1590 aa16.43■□□□□ 0.22
HCFC1R1-206ENST00000574151 CDC42BPBQ9Y5S2 1711 aa16.42■□□□□ 0.22
HCFC1R1-206ENST00000574151 STRCP1A6NGW2 1772 aa16.41■□□□□ 0.22
HCFC1R1-206ENST00000574151 A2ML1A8K2U0 1454 aa16.39■□□□□ 0.21
HCFC1R1-206ENST00000574151 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
HCFC1R1-206ENST00000574151 GGT6Q6P531 493 aa16.37■□□□□ 0.21
HCFC1R1-206ENST00000574151 RNF17Q9BXT8 1623 aaKnown RBP16.37■□□□□ 0.21
HCFC1R1-206ENST00000574151 ANKLE2Q86XL3 938 aa16.36■□□□□ 0.21
HCFC1R1-206ENST00000574151 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
HCFC1R1-206ENST00000574151 SRCAPQ6ZRS2 3230 aa16.34■□□□□ 0.21
HCFC1R1-206ENST00000574151 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.33■□□□□ 0.2
HCFC1R1-206ENST00000574151 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
HCFC1R1-206ENST00000574151 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
HCFC1R1-206ENST00000574151 ABCC1P33527 1531 aa16.31■□□□□ 0.2
HCFC1R1-206ENST00000574151 NPHP4O75161 1426 aaPredicted RBP16.31■□□□□ 0.2
HCFC1R1-206ENST00000574151 FBXO31Q5XUX0 539 aaPredicted RBP16.29■□□□□ 0.2
HCFC1R1-206ENST00000574151 IQGAP1P46940 1657 aa16.29■□□□□ 0.2
HCFC1R1-206ENST00000574151 XIRP1Q702N8 1843 aaKnown RBP16.28■□□□□ 0.2
HCFC1R1-206ENST00000574151 SYNMO15061 1565 aa16.26■□□□□ 0.19
HCFC1R1-206ENST00000574151 SAMD9LQ8IVG5 1584 aa16.26■□□□□ 0.19
HCFC1R1-206ENST00000574151 PREX2Q70Z35 1606 aa16.26■□□□□ 0.19
HCFC1R1-206ENST00000574151 SPAG9O60271 1321 aaKnown RBP16.25■□□□□ 0.19
HCFC1R1-206ENST00000574151 THEMISQ8N1K5 641 aaPredicted RBP16.25■□□□□ 0.19
HCFC1R1-206ENST00000574151 ZNF777Q9ULD5 760 aaPredicted RBP16.25■□□□□ 0.19
HCFC1R1-206ENST00000574151 TROQ12816 1431 aaPredicted RBP16.25■□□□□ 0.19
HCFC1R1-206ENST00000574151 TNRQ92752 1358 aa16.25■□□□□ 0.19
HCFC1R1-206ENST00000574151 MED14O60244 1454 aa16.24■□□□□ 0.19
HCFC1R1-206ENST00000574151 CSRNP3Q8WYN3 585 aa16.24■□□□□ 0.19
HCFC1R1-206ENST00000574151 DEPDC5O75140 1603 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms