RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 NISCHQ9Y2I1 1504 aa25.09■■□□□ 1.61
HCFC1R1-206ENST00000574151 ABCC9O60706 1549 aa24.05■■□□□ 1.44
HCFC1R1-206ENST00000574151 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
HCFC1R1-206ENST00000574151 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
HCFC1R1-206ENST00000574151 RB1CC1Q8TDY2 1594 aa22.34■■□□□ 1.17
HCFC1R1-206ENST00000574151 PABPN1Q86U42 306 aaKnown RBP eCLIP22.28■■□□□ 1.16
HCFC1R1-206ENST00000574151 DNAJC5Q9H3Z4 198 aa22.24■■□□□ 1.15
HCFC1R1-206ENST00000574151 UNC13AQ9UPW8 1703 aa21.99■■□□□ 1.11
HCFC1R1-206ENST00000574151 NACADO15069 1562 aa21.91■■□□□ 1.1
HCFC1R1-206ENST00000574151 DCAF8L2P0C7V8 631 aa21.86■■□□□ 1.09
HCFC1R1-206ENST00000574151 BICRAQ9NZM4 1560 aa21.76■■□□□ 1.07
HCFC1R1-206ENST00000574151 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
HCFC1R1-206ENST00000574151 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.05
HCFC1R1-206ENST00000574151 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
HCFC1R1-206ENST00000574151 SHROOM4Q9ULL8 1493 aa21.17■□□□□ 0.98
HCFC1R1-206ENST00000574151 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
HCFC1R1-206ENST00000574151 CUX2O14529 1486 aa21.01■□□□□ 0.95
HCFC1R1-206ENST00000574151 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
HCFC1R1-206ENST00000574151 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
HCFC1R1-206ENST00000574151 ERCC6Q03468 1493 aa20.8■□□□□ 0.92
HCFC1R1-206ENST00000574151 DCAF1Q9Y4B6 1507 aa20.56■□□□□ 0.88
HCFC1R1-206ENST00000574151 ZCCHC6Q5VYS8 1495 aaKnown RBP20.54■□□□□ 0.88
HCFC1R1-206ENST00000574151 NESP48681 1621 aa20.38■□□□□ 0.85
HCFC1R1-206ENST00000574151 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
HCFC1R1-206ENST00000574151 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
HCFC1R1-206ENST00000574151 SMARCA2P51531 1590 aa20.16■□□□□ 0.82
HCFC1R1-206ENST00000574151 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
HCFC1R1-206ENST00000574151 ATAD2BQ9ULI0 1458 aa20.06■□□□□ 0.8
HCFC1R1-206ENST00000574151 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
HCFC1R1-206ENST00000574151 OSCARQ8IYS5 282 aa19.99■□□□□ 0.79
HCFC1R1-206ENST00000574151 HMGXB3Q12766 1538 aa19.97■□□□□ 0.79
HCFC1R1-206ENST00000574151 LAMC3Q9Y6N6 1575 aa19.96■□□□□ 0.79
HCFC1R1-206ENST00000574151 AEBP2Q6ZN18 517 aaPredicted RBP19.96■□□□□ 0.79
HCFC1R1-206ENST00000574151 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
HCFC1R1-206ENST00000574151 RIMBP3CA6NJZ7 1639 aa19.85■□□□□ 0.77
HCFC1R1-206ENST00000574151 RIMBP3BA6NNM3 1639 aa19.85■□□□□ 0.77
HCFC1R1-206ENST00000574151 RIMBP3Q9UFD9 1639 aa19.85■□□□□ 0.77
HCFC1R1-206ENST00000574151 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
HCFC1R1-206ENST00000574151 SMARCA4P51532 1647 aa19.81■□□□□ 0.76
HCFC1R1-206ENST00000574151 TRHP20396 242 aaPredicted RBP19.8■□□□□ 0.76
HCFC1R1-206ENST00000574151 MRC2Q9UBG0 1479 aa19.78■□□□□ 0.76
HCFC1R1-206ENST00000574151 WDR62O43379 1518 aa19.74■□□□□ 0.75
HCFC1R1-206ENST00000574151 CYB5RLQ6IPT4 315 aa19.66■□□□□ 0.74
HCFC1R1-206ENST00000574151 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
HCFC1R1-206ENST00000574151 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
HCFC1R1-206ENST00000574151 PEG3Q9GZU2 1588 aa19.54■□□□□ 0.72
HCFC1R1-206ENST00000574151 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
HCFC1R1-206ENST00000574151 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
HCFC1R1-206ENST00000574151 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
HCFC1R1-206ENST00000574151 ARAP1Q96P48 1450 aa19.36■□□□□ 0.69
HCFC1R1-206ENST00000574151 URB2Q14146 1524 aaKnown RBP19.33■□□□□ 0.68
HCFC1R1-206ENST00000574151 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
HCFC1R1-206ENST00000574151 ILDR1Q86SU0 546 aaPredicted RBP19.26■□□□□ 0.67
HCFC1R1-206ENST00000574151 CHD1O14646 1710 aa19.23■□□□□ 0.67
HCFC1R1-206ENST00000574151 FBLN2P98095 1184 aa19.16■□□□□ 0.66
HCFC1R1-206ENST00000574151 WIZO95785 1651 aa19.15■□□□□ 0.66
HCFC1R1-206ENST00000574151 CFTRP13569 1480 aa19.15■□□□□ 0.66
HCFC1R1-206ENST00000574151 IFT140Q96RY7 1462 aa19.13■□□□□ 0.65
HCFC1R1-206ENST00000574151 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
HCFC1R1-206ENST00000574151 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
HCFC1R1-206ENST00000574151 AQRO60306 1485 aaKnown RBP eCLIP19■□□□□ 0.632e-10■■■■■ 40.6
HCFC1R1-206ENST00000574151 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
HCFC1R1-206ENST00000574151 TOPBP1Q92547 1522 aa18.93■□□□□ 0.62
HCFC1R1-206ENST00000574151 CLASP1Q7Z460 1538 aa18.85■□□□□ 0.61
HCFC1R1-206ENST00000574151 TARBP1Q13395 1621 aaKnown RBP18.84■□□□□ 0.61
HCFC1R1-206ENST00000574151 GAPVD1Q14C86 1478 aa18.78■□□□□ 0.6
HCFC1R1-206ENST00000574151 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
HCFC1R1-206ENST00000574151 SYNJ1O43426 1573 aa18.77■□□□□ 0.6
HCFC1R1-206ENST00000574151 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
HCFC1R1-206ENST00000574151 KDM4FA0A1W2PPD8 638 aa18.75■□□□□ 0.59
HCFC1R1-206ENST00000574151 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
HCFC1R1-206ENST00000574151 SNAPC4Q5SXM2 1469 aa18.73■□□□□ 0.59
HCFC1R1-206ENST00000574151 TDRD9Q8NDG6 1382 aaKnown RBP18.73■□□□□ 0.59
HCFC1R1-206ENST00000574151 KIF13AQ9H1H9 1805 aa18.73■□□□□ 0.59
HCFC1R1-206ENST00000574151 TOP2AP11388 1531 aaKnown RBP18.72■□□□□ 0.59
HCFC1R1-206ENST00000574151 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
HCFC1R1-206ENST00000574151 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
HCFC1R1-206ENST00000574151 ERCC6L2Q5T890 1561 aa18.59■□□□□ 0.57
HCFC1R1-206ENST00000574151 SOGA1O94964 1423 aa18.59■□□□□ 0.57
HCFC1R1-206ENST00000574151 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
HCFC1R1-206ENST00000574151 MAGI1Q96QZ7 1491 aaPredicted RBP18.57■□□□□ 0.56
HCFC1R1-206ENST00000574151 SYNJ2O15056 1496 aa18.55■□□□□ 0.56
HCFC1R1-206ENST00000574151 FAM69CQ0P6D2 419 aa18.5■□□□□ 0.55
HCFC1R1-206ENST00000574151 GRIN2BQ13224 1484 aa18.5■□□□□ 0.55
HCFC1R1-206ENST00000574151 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
HCFC1R1-206ENST00000574151 KDM6BO15054 1643 aa18.46■□□□□ 0.55
HCFC1R1-206ENST00000574151 TSPOAP1O95153 1857 aa18.46■□□□□ 0.54
HCFC1R1-206ENST00000574151 PBRM1Q86U86 1689 aa18.45■□□□□ 0.54
HCFC1R1-206ENST00000574151 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
HCFC1R1-206ENST00000574151 HECW2Q9P2P5 1572 aa18.42■□□□□ 0.54
HCFC1R1-206ENST00000574151 CEP170Q5SW79 1584 aa18.41■□□□□ 0.54
HCFC1R1-206ENST00000574151 FBXO41Q8TF61 875 aa18.38■□□□□ 0.53
HCFC1R1-206ENST00000574151 ABCC10Q5T3U5 1492 aa18.37■□□□□ 0.53
HCFC1R1-206ENST00000574151 ADGRL1O94910 1474 aa18.33■□□□□ 0.52
HCFC1R1-206ENST00000574151 DIP2BQ9P265 1576 aa18.31■□□□□ 0.52
HCFC1R1-206ENST00000574151 NPM1P06748 294 aaKnown RBP eCLIP18.3■□□□□ 0.52
HCFC1R1-206ENST00000574151 SHROOM2Q13796 1616 aa18.27■□□□□ 0.52
HCFC1R1-206ENST00000574151 GRIN2AQ12879 1464 aa18.27■□□□□ 0.52
HCFC1R1-206ENST00000574151 CUX1P39880 1505 aa18.24■□□□□ 0.51
HCFC1R1-206ENST00000574151 LMTK3Q96Q04 1460 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms