RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 PLB1Q6P1J6 1458 aa8.03□□□□□ -1.12
CNOT1-211ENST00000567188 PPM1GO15355 546 aaPredicted RBP8.02□□□□□ -1.12
CNOT1-211ENST00000567188 CDK11BP21127 795 aaKnown RBP8.02□□□□□ -1.13
CNOT1-211ENST00000567188 FMN1Q68DA7 1419 aa8.02□□□□□ -1.13
CNOT1-211ENST00000567188 ABCA5Q8WWZ7 1642 aa8.02□□□□□ -1.13
CNOT1-211ENST00000567188 NEFMP07197 916 aa8.02□□□□□ -1.13
CNOT1-211ENST00000567188 VPS8Q8N3P4 1428 aa8.02□□□□□ -1.13
CNOT1-211ENST00000567188 SIN3AQ96ST3 1273 aa8.01□□□□□ -1.13
CNOT1-211ENST00000567188 SENP3-EIF4A1A0A087X0R7 540 aa8.01□□□□□ -1.13
CNOT1-211ENST00000567188 C14orf37Q86TY3 774 aa8.01□□□□□ -1.13
CNOT1-211ENST00000567188 MAGI1Q96QZ7 1491 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-211ENST00000567188 WDR97A6NE52 1622 aa8.01□□□□□ -1.13
CNOT1-211ENST00000567188 SAFB2Q14151 953 aaKnown RBP eCLIP7.99□□□□□ -1.13
CNOT1-211ENST00000567188 RAPGEF6Q8TEU7 1601 aa7.99□□□□□ -1.13
CNOT1-211ENST00000567188 ANP32CO43423 234 aa7.98□□□□□ -1.13
CNOT1-211ENST00000567188 CCDC18Q5T9S5 1454 aa7.98□□□□□ -1.13
CNOT1-211ENST00000567188 DDRGK1Q96HY6 314 aa7.98□□□□□ -1.13
CNOT1-211ENST00000567188 RSPH6AQ9H0K4 717 aa7.97□□□□□ -1.13
CNOT1-211ENST00000567188 KIAA0556O60303 1618 aa7.97□□□□□ -1.13
CNOT1-211ENST00000567188 ARHGEF11O15085 1522 aa7.97□□□□□ -1.13
CNOT1-211ENST00000567188 SUPT6HQ7KZ85 1726 aaKnown RBP7.96□□□□□ -1.13
CNOT1-211ENST00000567188 STK26Q9P289 416 aa7.96□□□□□ -1.13
CNOT1-211ENST00000567188 KIF3BO15066 747 aa7.96□□□□□ -1.14
CNOT1-211ENST00000567188 KIF14Q15058 1648 aa7.96□□□□□ -1.14
CNOT1-211ENST00000567188 TONSLQ96HA7 1378 aa7.96□□□□□ -1.14
CNOT1-211ENST00000567188 ERCC6L2Q5T890 1561 aa7.95□□□□□ -1.14
CNOT1-211ENST00000567188 A0A0G2JS52 829 aa7.94□□□□□ -1.14
CNOT1-211ENST00000567188 KRI1Q8N9T8 703 aaKnown RBP7.94□□□□□ -1.14
CNOT1-211ENST00000567188 PRXQ9BXM0 1461 aa7.93□□□□□ -1.14
CNOT1-211ENST00000567188 SPAG9O60271 1321 aaKnown RBP7.93□□□□□ -1.14
CNOT1-211ENST00000567188 PTMSP20962 102 aa7.93□□□□□ -1.14
CNOT1-211ENST00000567188 DEKP35659 375 aaKnown RBP7.93□□□□□ -1.14
CNOT1-211ENST00000567188 KANK1Q14678 1352 aa7.93□□□□□ -1.14
CNOT1-211ENST00000567188 NCOA2Q15596 1464 aa7.93□□□□□ -1.14
CNOT1-211ENST00000567188 FKBP8Q14318 412 aa7.93□□□□□ -1.14
CNOT1-211ENST00000567188 RAPGEF3O95398 923 aa7.92□□□□□ -1.14
CNOT1-211ENST00000567188 LRRC9Q6ZRR7 1453 aa7.92□□□□□ -1.14
CNOT1-211ENST00000567188 EFCAB2Q5VUJ9 269 aa7.92□□□□□ -1.14
CNOT1-211ENST00000567188 EFCAB5A4FU69 1503 aa7.91□□□□□ -1.14
CNOT1-211ENST00000567188 KIAA0586Q9BVV6 1533 aa7.91□□□□□ -1.14
CNOT1-211ENST00000567188 FYCO1Q9BQS8 1478 aa7.91□□□□□ -1.14
CNOT1-211ENST00000567188 PKNOX2Q96KN3 472 aa7.91□□□□□ -1.14
CNOT1-211ENST00000567188 PODXL2Q9NZ53 605 aa7.91□□□□□ -1.14
CNOT1-211ENST00000567188 CASKIN1Q8WXD9 1431 aa7.91□□□□□ -1.14
CNOT1-211ENST00000567188 UACAQ9BZF9 1416 aa7.91□□□□□ -1.14
CNOT1-211ENST00000567188 HSP90AA1P07900 732 aaKnown RBP7.91□□□□□ -1.14
CNOT1-211ENST00000567188 PHLDB1Q86UU1 1377 aa7.9□□□□□ -1.14
CNOT1-211ENST00000567188 EHBP1L1Q8N3D4 1523 aa7.9□□□□□ -1.14
CNOT1-211ENST00000567188 TIAM1Q13009 1591 aa7.9□□□□□ -1.14
CNOT1-211ENST00000567188 WASHC2CQ9Y4E1 1318 aa7.9□□□□□ -1.15
CNOT1-211ENST00000567188 PKD2Q13563 968 aa7.9□□□□□ -1.15
CNOT1-211ENST00000567188 ZCCHC11Q5TAX3 1644 aaKnown RBP7.89□□□□□ -1.15
CNOT1-211ENST00000567188 EPRSP07814 1512 aaKnown RBP7.89□□□□□ -1.15
CNOT1-211ENST00000567188 SOX12O15370 315 aa7.89□□□□□ -1.15
CNOT1-211ENST00000567188 LMOD2Q6P5Q4 547 aa7.89□□□□□ -1.15
CNOT1-211ENST00000567188 PTPN23Q9H3S7 1636 aa7.89□□□□□ -1.15
CNOT1-211ENST00000567188 TMC1Q8TDI8 760 aa7.89□□□□□ -1.15
CNOT1-211ENST00000567188 DCAF11Q8TEB1 546 aa7.89□□□□□ -1.15
CNOT1-211ENST00000567188 SALL2Q9Y467 1007 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-211ENST00000567188 L1TD1Q5T7N2 865 aaKnown RBP7.88□□□□□ -1.15
CNOT1-211ENST00000567188 NUTM2FA1L443 756 aa7.88□□□□□ -1.15
CNOT1-211ENST00000567188 AFAP1Q8N556 730 aa7.88□□□□□ -1.15
CNOT1-211ENST00000567188 RAB3GAP2Q9H2M9 1393 aa7.88□□□□□ -1.15
CNOT1-211ENST00000567188 RIMBP3CA6NJZ7 1639 aa7.88□□□□□ -1.15
CNOT1-211ENST00000567188 RIMBP3BA6NNM3 1639 aa7.88□□□□□ -1.15
CNOT1-211ENST00000567188 RIMBP3Q9UFD9 1639 aa7.88□□□□□ -1.15
CNOT1-211ENST00000567188 SETD5Q9C0A6 1442 aa7.88□□□□□ -1.15
CNOT1-211ENST00000567188 NBR1Q14596 966 aa7.88□□□□□ -1.15
CNOT1-211ENST00000567188 NAP1L5Q96NT1 182 aaPredicted RBP7.88□□□□□ -1.15
CNOT1-211ENST00000567188 NOP58Q9Y2X3 529 aaKnown RBP7.88□□□□□ -1.15
CNOT1-211ENST00000567188 NUP155O75694 1391 aa7.87□□□□□ -1.15
CNOT1-211ENST00000567188 ASXL2Q76L83 1435 aa7.86□□□□□ -1.15
CNOT1-211ENST00000567188 ANKRD30AQ9BXX3 1397 aa7.86□□□□□ -1.15
CNOT1-211ENST00000567188 CAMSAP2Q08AD1 1489 aa7.85□□□□□ -1.15
CNOT1-211ENST00000567188 MPHOSPH9Q99550 1183 aa7.85□□□□□ -1.15
CNOT1-211ENST00000567188 DDX10Q13206 875 aaKnown RBP7.85□□□□□ -1.15
CNOT1-211ENST00000567188 CD109Q6YHK3 1445 aa7.85□□□□□ -1.15
CNOT1-211ENST00000567188 HAP1P54257 671 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-211ENST00000567188 UPF2Q9HAU5 1272 aaKnown RBP7.85□□□□□ -1.15
CNOT1-211ENST00000567188 CFAP43Q8NDM7 1665 aa7.84□□□□□ -1.15
CNOT1-211ENST00000567188 POGKQ9P215 609 aa7.84□□□□□ -1.16
CNOT1-211ENST00000567188 SCAPERQ9BY12 1400 aa7.83□□□□□ -1.16
CNOT1-211ENST00000567188 DISP1Q96F81 1524 aa7.83□□□□□ -1.16
CNOT1-211ENST00000567188 CC2D1BQ5T0F9 858 aaKnown RBP7.82□□□□□ -1.16
CNOT1-211ENST00000567188 NPM2Q86SE8 214 aaKnown RBP7.82□□□□□ -1.16
CNOT1-211ENST00000567188 USP35Q9P2H5 1018 aa7.82□□□□□ -1.16
CNOT1-211ENST00000567188 CARD11Q9BXL7 1154 aa7.82□□□□□ -1.16
CNOT1-211ENST00000567188 FGD6Q6ZV73 1430 aa7.82□□□□□ -1.16
CNOT1-211ENST00000567188 MYOM3Q5VTT5 1437 aa7.81□□□□□ -1.16
CNOT1-211ENST00000567188 CEBPAP49715 358 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-211ENST00000567188 PAK3O75914 559 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-211ENST00000567188 LAS1LQ9Y4W2 734 aaKnown RBP7.81□□□□□ -1.16
CNOT1-211ENST00000567188 BECN1Q14457 450 aa7.8□□□□□ -1.16
CNOT1-211ENST00000567188 LRRIQ1Q96JM4 1722 aa7.8□□□□□ -1.16
CNOT1-211ENST00000567188 ATP10BO94823 1461 aa7.8□□□□□ -1.16
CNOT1-211ENST00000567188 SYCP2Q9BX26 1530 aa7.8□□□□□ -1.16
CNOT1-211ENST00000567188 ADGRL1O94910 1474 aa7.8□□□□□ -1.16
CNOT1-211ENST00000567188 UBE2Q2Q8WVN8 375 aa7.8□□□□□ -1.16
CNOT1-211ENST00000567188 UGGT2Q9NYU1 1516 aa7.8□□□□□ -1.16
CNOT1-211ENST00000567188 ITSN2Q9NZM3 1697 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms