RNA–Protein interactions for RNA: ENST00000564061.5

POLR3E-208, Transcript of RNA polymerase III subunit E, humanhuman

TSL 1 (best)

Gene POLR3E, Length 4,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-208ENST00000564061 TMF1P82094 1093 aa16.43■□□□□ 0.22
POLR3E-208ENST00000564061 ST20-MTHFSA0A0A6YYL1 179 aa16.43■□□□□ 0.22
POLR3E-208ENST00000564061 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
POLR3E-208ENST00000564061 PPM1GO15355 546 aaPredicted RBP16.42■□□□□ 0.22
POLR3E-208ENST00000564061 LRRC9Q6ZRR7 1453 aa16.42■□□□□ 0.22
POLR3E-208ENST00000564061 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
POLR3E-208ENST00000564061 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
POLR3E-208ENST00000564061 RRBP1Q9P2E9 1410 aaKnown RBP16.4■□□□□ 0.22
POLR3E-208ENST00000564061 WASHC2AQ641Q2 1341 aa16.39■□□□□ 0.21
POLR3E-208ENST00000564061 CDCA8Q53HL2 280 aa16.39■□□□□ 0.21
POLR3E-208ENST00000564061 ERICH6BQ5W0A0 696 aa16.39■□□□□ 0.21
POLR3E-208ENST00000564061 FGD6Q6ZV73 1430 aa16.38■□□□□ 0.21
POLR3E-208ENST00000564061 PLIN1O60240 522 aa16.37■□□□□ 0.21
POLR3E-208ENST00000564061 KTN1Q86UP2 1357 aaKnown RBP16.37■□□□□ 0.21
POLR3E-208ENST00000564061 SAFB2Q14151 953 aaKnown RBP eCLIP16.35■□□□□ 0.21
POLR3E-208ENST00000564061 CCDC184Q52MB2 194 aa16.35■□□□□ 0.21
POLR3E-208ENST00000564061 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
POLR3E-208ENST00000564061 ESF1Q9H501 851 aaKnown RBP16.34■□□□□ 0.21
POLR3E-208ENST00000564061 NESP48681 1621 aa16.34■□□□□ 0.21
POLR3E-208ENST00000564061 ANKRD30AQ9BXX3 1397 aa16.34■□□□□ 0.21
POLR3E-208ENST00000564061 FTSJ3Q8IY81 847 aaKnown RBP16.33■□□□□ 0.21
POLR3E-208ENST00000564061 BECN1Q14457 450 aa16.33■□□□□ 0.2
POLR3E-208ENST00000564061 RALBP1Q15311 655 aa16.33■□□□□ 0.2
POLR3E-208ENST00000564061 EXOC6Q8TAG9 804 aa16.32■□□□□ 0.2
POLR3E-208ENST00000564061 KIF7Q2M1P5 1343 aa16.32■□□□□ 0.2
POLR3E-208ENST00000564061 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
POLR3E-208ENST00000564061 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
POLR3E-208ENST00000564061 ZBED9Q6R2W3 1325 aa16.32■□□□□ 0.2
POLR3E-208ENST00000564061 SPRYD3Q8NCJ5 442 aa16.32■□□□□ 0.2
POLR3E-208ENST00000564061 PLEKHG5O94827 1062 aa16.31■□□□□ 0.2
POLR3E-208ENST00000564061 CFAP53Q96M91 514 aa16.31■□□□□ 0.2
POLR3E-208ENST00000564061 IPO9Q96P70 1041 aaKnown RBP16.31■□□□□ 0.2
POLR3E-208ENST00000564061 UACAQ9BZF9 1416 aa16.3■□□□□ 0.2
POLR3E-208ENST00000564061 USP47Q96K76 1375 aa16.3■□□□□ 0.2
POLR3E-208ENST00000564061 NLRP13Q86W25 1043 aa16.3■□□□□ 0.2
POLR3E-208ENST00000564061 WDR97A6NE52 1622 aa16.29■□□□□ 0.2
POLR3E-208ENST00000564061 ANP32BQ92688 251 aaKnown RBP16.28■□□□□ 0.2
POLR3E-208ENST00000564061 CCDC7Q96M83 1385 aa16.28■□□□□ 0.2
POLR3E-208ENST00000564061 JPH4Q96JJ6 628 aa16.28■□□□□ 0.2
POLR3E-208ENST00000564061 MYOM3Q5VTT5 1437 aa16.27■□□□□ 0.2
POLR3E-208ENST00000564061 SLC4A3P48751 1232 aa16.27■□□□□ 0.2
POLR3E-208ENST00000564061 PANK3Q9H999 370 aa16.26■□□□□ 0.19
POLR3E-208ENST00000564061 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
POLR3E-208ENST00000564061 NBPF8Q3BBV2 869 aa16.25■□□□□ 0.19
POLR3E-208ENST00000564061 MORC1Q86VD1 984 aa16.25■□□□□ 0.19
POLR3E-208ENST00000564061 NCOA2Q15596 1464 aa16.24■□□□□ 0.19
POLR3E-208ENST00000564061 GGT6Q6P531 493 aa16.23■□□□□ 0.19
POLR3E-208ENST00000564061 MYBBP1AQ9BQG0 1328 aaKnown RBP16.23■□□□□ 0.19
POLR3E-208ENST00000564061 CARMIL2Q6F5E8 1435 aa16.22■□□□□ 0.19
POLR3E-208ENST00000564061 SLKQ9H2G2 1235 aaPredicted RBP16.22■□□□□ 0.19
POLR3E-208ENST00000564061 MAPK8IP3Q9UPT6 1336 aa16.22■□□□□ 0.19
POLR3E-208ENST00000564061 MYH16Q9H6N6 1097 aa16.22■□□□□ 0.19
POLR3E-208ENST00000564061 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
POLR3E-208ENST00000564061 CLUAP1Q96AJ1 413 aa16.22■□□□□ 0.19
POLR3E-208ENST00000564061 STK26Q9P289 416 aa16.21■□□□□ 0.19
POLR3E-208ENST00000564061 CASKIN1Q8WXD9 1431 aa16.21■□□□□ 0.19
POLR3E-208ENST00000564061 RRP1P56182 461 aaKnown RBP16.21■□□□□ 0.18
POLR3E-208ENST00000564061 FANCIQ9NVI1 1328 aa16.21■□□□□ 0.18
POLR3E-208ENST00000564061 KIF15Q9NS87 1388 aa16.2■□□□□ 0.18
POLR3E-208ENST00000564061 POGKQ9P215 609 aa16.2■□□□□ 0.18
POLR3E-208ENST00000564061 PDE4AP27815 886 aa16.2■□□□□ 0.18
POLR3E-208ENST00000564061 NUTM2DQ5VT03 806 aaPredicted RBP16.2■□□□□ 0.18
POLR3E-208ENST00000564061 GOLGA2Q08379 1002 aa16.19■□□□□ 0.18
POLR3E-208ENST00000564061 TPRNQ4KMQ1 711 aa16.19■□□□□ 0.18
POLR3E-208ENST00000564061 CRBNQ96SW2 442 aa16.19■□□□□ 0.18
POLR3E-208ENST00000564061 LAMC3Q9Y6N6 1575 aa16.19■□□□□ 0.18
POLR3E-208ENST00000564061 CNTLNQ9NXG0 1405 aa16.19■□□□□ 0.18
POLR3E-208ENST00000564061 RRP7AQ9Y3A4 280 aaKnown RBP16.18■□□□□ 0.18
POLR3E-208ENST00000564061 NCLP19338 710 aaKnown RBP16.17■□□□□ 0.18
POLR3E-208ENST00000564061 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.185e-7■■■■□ 24.1
POLR3E-208ENST00000564061 SRPK2P78362 688 aaKnown RBP16.17■□□□□ 0.18
POLR3E-208ENST00000564061 KIF3BO15066 747 aa16.17■□□□□ 0.18
POLR3E-208ENST00000564061 C11orf95C9JLR9 678 aaPredicted RBP16.16■□□□□ 0.18
POLR3E-208ENST00000564061 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
POLR3E-208ENST00000564061 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.182e-6■■■■□ 21.7
POLR3E-208ENST00000564061 TIAM1Q13009 1591 aa16.15■□□□□ 0.18
POLR3E-208ENST00000564061 ZBTB7CA1YPR0 619 aa16.15■□□□□ 0.18
POLR3E-208ENST00000564061 CDCA7LQ96GN5 454 aa16.15■□□□□ 0.18
POLR3E-208ENST00000564061 BCL2L13Q9BXK5 485 aa16.15■□□□□ 0.18
POLR3E-208ENST00000564061 SOX12O15370 315 aa16.14■□□□□ 0.17
POLR3E-208ENST00000564061 PDE3BQ13370 1112 aa16.14■□□□□ 0.17
POLR3E-208ENST00000564061 EFCAB2Q5VUJ9 269 aa16.14■□□□□ 0.17
POLR3E-208ENST00000564061 AKNAQ7Z591 1439 aa16.13■□□□□ 0.17
POLR3E-208ENST00000564061 CCDC144AA2RUR9 1427 aa16.12■□□□□ 0.17
POLR3E-208ENST00000564061 GZF1Q9H116 711 aaPredicted RBP16.12■□□□□ 0.17
POLR3E-208ENST00000564061 C14orf37Q86TY3 774 aa16.12■□□□□ 0.17
POLR3E-208ENST00000564061 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
POLR3E-208ENST00000564061 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
POLR3E-208ENST00000564061 TRIM44Q96DX7 344 aaPredicted RBP16.11■□□□□ 0.17
POLR3E-208ENST00000564061 KANK1Q14678 1352 aa16.1■□□□□ 0.17
POLR3E-208ENST00000564061 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
POLR3E-208ENST00000564061 TRAK1Q9UPV9 953 aa16.1■□□□□ 0.17
POLR3E-208ENST00000564061 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
POLR3E-208ENST00000564061 FYCO1Q9BQS8 1478 aa16.1■□□□□ 0.17
POLR3E-208ENST00000564061 APAF1O14727 1248 aa16.1■□□□□ 0.17
POLR3E-208ENST00000564061 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
POLR3E-208ENST00000564061 MRC2Q9UBG0 1479 aa16.09■□□□□ 0.17
POLR3E-208ENST00000564061 HFM1A2PYH4 1435 aa16.09■□□□□ 0.17
POLR3E-208ENST00000564061 NBPF1Q3BBV0 1214 aa16.08■□□□□ 0.16
POLR3E-208ENST00000564061 APBB1O00213 710 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms