RNA–Protein interactions for RNA: ENST00000564061.5

POLR3E-208, Transcript of RNA polymerase III subunit E, humanhuman

TSL 1 (best)

Gene POLR3E, Length 4,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-208ENST00000564061 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
POLR3E-208ENST00000564061 DCAF8L2P0C7V8 631 aa21.9■■□□□ 1.1
POLR3E-208ENST00000564061 SUPT5HO00267 1087 aaKnown RBP21.5■■□□□ 1.03
POLR3E-208ENST00000564061 SHROOM4Q9ULL8 1493 aa21.38■■□□□ 1.01
POLR3E-208ENST00000564061 EHMT2Q96KQ7 1210 aa20.62■□□□□ 0.89
POLR3E-208ENST00000564061 PCGF6Q9BYE7 350 aa20.38■□□□□ 0.85
POLR3E-208ENST00000564061 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
POLR3E-208ENST00000564061 TTBK1Q5TCY1 1321 aaPredicted RBP19.92■□□□□ 0.78
POLR3E-208ENST00000564061 TRIM41Q8WV44 630 aa19.74■□□□□ 0.75
POLR3E-208ENST00000564061 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
POLR3E-208ENST00000564061 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
POLR3E-208ENST00000564061 PPARGC1BQ86YN6 1023 aaKnown RBP19.64■□□□□ 0.73
POLR3E-208ENST00000564061 HRCP23327 699 aa19.63■□□□□ 0.73
POLR3E-208ENST00000564061 RANGAP1P46060 587 aaPredicted RBP19.48■□□□□ 0.71
POLR3E-208ENST00000564061 CCER1Q8TC90 406 aaPredicted RBP19.45■□□□□ 0.7
POLR3E-208ENST00000564061 TRIM26Q12899 539 aaPredicted RBP19.39■□□□□ 0.69
POLR3E-208ENST00000564061 APLP2Q06481 763 aa19.38■□□□□ 0.69
POLR3E-208ENST00000564061 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
POLR3E-208ENST00000564061 UBTFP17480 764 aaKnown RBP19.25■□□□□ 0.67
POLR3E-208ENST00000564061 YTHDC1Q96MU7 727 aaKnown RBP19.14■□□□□ 0.65
POLR3E-208ENST00000564061 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.65
POLR3E-208ENST00000564061 CENPBP07199 599 aaPredicted RBP19.11■□□□□ 0.65
POLR3E-208ENST00000564061 ZCCHC6Q5VYS8 1495 aaKnown RBP19.1■□□□□ 0.65
POLR3E-208ENST00000564061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19■□□□□ 0.63
POLR3E-208ENST00000564061 ABCC9O60706 1549 aa18.97■□□□□ 0.63
POLR3E-208ENST00000564061 PELP1Q8IZL8 1130 aaKnown RBP18.91■□□□□ 0.62
POLR3E-208ENST00000564061 ATP1B4Q9UN42 357 aaPredicted RBP18.9■□□□□ 0.62
POLR3E-208ENST00000564061 HNRNPUL2Q1KMD3 747 aaKnown RBP18.86■□□□□ 0.61
POLR3E-208ENST00000564061 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
POLR3E-208ENST00000564061 ITGAEP38570 1179 aa18.73■□□□□ 0.59
POLR3E-208ENST00000564061 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
POLR3E-208ENST00000564061 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
POLR3E-208ENST00000564061 GTF3C3Q9Y5Q9 886 aa18.47■□□□□ 0.55
POLR3E-208ENST00000564061 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
POLR3E-208ENST00000564061 NEFLP07196 543 aa18.36■□□□□ 0.53
POLR3E-208ENST00000564061 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
POLR3E-208ENST00000564061 ERICH6Q7L0X2 663 aa18.29■□□□□ 0.52
POLR3E-208ENST00000564061 ACIN1Q9UKV3 1341 aaKnown RBP18.27■□□□□ 0.52
POLR3E-208ENST00000564061 CSRNP3Q8WYN3 585 aa18.26■□□□□ 0.51
POLR3E-208ENST00000564061 CNGB1Q14028 1251 aaPredicted RBP18.25■□□□□ 0.51
POLR3E-208ENST00000564061 ZNF316A6NFI3 1004 aaPredicted RBP18.24■□□□□ 0.51
POLR3E-208ENST00000564061 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
POLR3E-208ENST00000564061 NEUROD1Q13562 356 aa18.18■□□□□ 0.5
POLR3E-208ENST00000564061 FAM50AQ14320 339 aaKnown RBP18.18■□□□□ 0.5
POLR3E-208ENST00000564061 POLR3GLQ9BT43 218 aa18.15■□□□□ 0.5
POLR3E-208ENST00000564061 RB1CC1Q8TDY2 1594 aa18.14■□□□□ 0.49
POLR3E-208ENST00000564061 BCANQ96GW7 911 aa18.14■□□□□ 0.49
POLR3E-208ENST00000564061 RSF1Q96T23 1441 aaPredicted RBP18.12■□□□□ 0.49
POLR3E-208ENST00000564061 NACADO15069 1562 aa18.11■□□□□ 0.49
POLR3E-208ENST00000564061 MYT1Q01538 1121 aa18.08■□□□□ 0.48
POLR3E-208ENST00000564061 P3H3Q8IVL6 736 aa18.02■□□□□ 0.48
POLR3E-208ENST00000564061 MIER1Q8N108 512 aa17.91■□□□□ 0.46
POLR3E-208ENST00000564061 TRIM52Q96A61 297 aa17.88■□□□□ 0.45
POLR3E-208ENST00000564061 ARID3CA6NKF2 412 aa17.83■□□□□ 0.44
POLR3E-208ENST00000564061 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
POLR3E-208ENST00000564061 CEP162Q5TB80 1403 aa17.79■□□□□ 0.44
POLR3E-208ENST00000564061 ANP32CO43423 234 aa17.78■□□□□ 0.44
POLR3E-208ENST00000564061 DDX10Q13206 875 aaKnown RBP17.75■□□□□ 0.43
POLR3E-208ENST00000564061 ZNF326Q5BKZ1 582 aaKnown RBP17.73■□□□□ 0.43
POLR3E-208ENST00000564061 HIRIP3Q9BW71 556 aaPredicted RBP17.73■□□□□ 0.43
POLR3E-208ENST00000564061 CLIP1P30622 1438 aa17.7■□□□□ 0.42
POLR3E-208ENST00000564061 FKBP8Q14318 412 aa17.67■□□□□ 0.42
POLR3E-208ENST00000564061 MROH2BQ7Z745 1585 aa17.65■□□□□ 0.42
POLR3E-208ENST00000564061 SOGA1O94964 1423 aa17.63■□□□□ 0.41
POLR3E-208ENST00000564061 MYT1LQ9UL68 1186 aa17.62■□□□□ 0.41
POLR3E-208ENST00000564061 BAZ1AQ9NRL2 1556 aaPredicted RBP17.59■□□□□ 0.41
POLR3E-208ENST00000564061 TNIKQ9UKE5 1360 aa17.57■□□□□ 0.4
POLR3E-208ENST00000564061 GOLGA3Q08378 1498 aa17.55■□□□□ 0.4
POLR3E-208ENST00000564061 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
POLR3E-208ENST00000564061 FBLN2P98095 1184 aa17.53■□□□□ 0.4
POLR3E-208ENST00000564061 CHIC2Q9UKJ5 165 aa17.53■□□□□ 0.4
POLR3E-208ENST00000564061 CDK11AQ9UQ88 783 aaPredicted RBP17.52■□□□□ 0.4
POLR3E-208ENST00000564061 WIZO95785 1651 aa17.51■□□□□ 0.39
POLR3E-208ENST00000564061 HNRNPUQ00839 825 aaKnown RBP eCLIP17.5■□□□□ 0.39
POLR3E-208ENST00000564061 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
POLR3E-208ENST00000564061 TONSLQ96HA7 1378 aa17.49■□□□□ 0.39
POLR3E-208ENST00000564061 CCDC88BA6NC98 1476 aa17.48■□□□□ 0.39
POLR3E-208ENST00000564061 DAXXQ9UER7 740 aaPredicted RBP17.47■□□□□ 0.39
POLR3E-208ENST00000564061 IRX6P78412 446 aaPredicted RBP17.46■□□□□ 0.39
POLR3E-208ENST00000564061 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
POLR3E-208ENST00000564061 EEA1Q15075 1411 aa17.45■□□□□ 0.38
POLR3E-208ENST00000564061 FAM9BQ8IZU0 186 aa17.44■□□□□ 0.38
POLR3E-208ENST00000564061 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
POLR3E-208ENST00000564061 SIN3AQ96ST3 1273 aa17.41■□□□□ 0.38
POLR3E-208ENST00000564061 RTL5Q5HYW3 569 aaPredicted RBP17.37■□□□□ 0.37
POLR3E-208ENST00000564061 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
POLR3E-208ENST00000564061 SENP3-EIF4A1A0A087X0R7 540 aa17.36■□□□□ 0.37
POLR3E-208ENST00000564061 KANK4Q5T7N3 995 aaPredicted RBP17.34■□□□□ 0.37
POLR3E-208ENST00000564061 RRP7BPQ9NSQ0 103 aa17.33■□□□□ 0.37
POLR3E-208ENST00000564061 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.36
POLR3E-208ENST00000564061 CLSPNQ9HAW4 1339 aa17.32■□□□□ 0.36
POLR3E-208ENST00000564061 TOP2AP11388 1531 aaKnown RBP17.31■□□□□ 0.36
POLR3E-208ENST00000564061 BAZ1BQ9UIG0 1483 aaKnown RBP17.29■□□□□ 0.36
POLR3E-208ENST00000564061 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
POLR3E-208ENST00000564061 SMARCA4P51532 1647 aa17.27■□□□□ 0.36
POLR3E-208ENST00000564061 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.35
POLR3E-208ENST00000564061 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
POLR3E-208ENST00000564061 NPM2Q86SE8 214 aaKnown RBP17.26■□□□□ 0.35
POLR3E-208ENST00000564061 MRS2Q9HD23 443 aa17.24■□□□□ 0.35
POLR3E-208ENST00000564061 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms