RNA–Protein interactions for RNA: ENST00000558170.6

ZEB2-225, Transcript of zinc finger E-box binding homeobox 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZEB2, Length 4,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-225ENST00000558170 FYCO1Q9BQS8 1478 aa19.65■□□□□ 0.74
ZEB2-225ENST00000558170 ZNF644Q9H582 1327 aaPredicted RBP19.65■□□□□ 0.74
ZEB2-225ENST00000558170 CNTLNQ9NXG0 1405 aa19.65■□□□□ 0.74
ZEB2-225ENST00000558170 BIVM-ERCC5R4GMW8 1640 aa19.64■□□□□ 0.73
ZEB2-225ENST00000558170 HFM1A2PYH4 1435 aa19.64■□□□□ 0.73
ZEB2-225ENST00000558170 PCF11O94913 1555 aaKnown RBP19.62■□□□□ 0.73
ZEB2-225ENST00000558170 NBPF8Q3BBV2 869 aa19.62■□□□□ 0.73
ZEB2-225ENST00000558170 IPO9Q96P70 1041 aaKnown RBP19.62■□□□□ 0.73
ZEB2-225ENST00000558170 RCAN3Q9UKA8 241 aa19.61■□□□□ 0.73
ZEB2-225ENST00000558170 EIF5BO60841 1220 aaKnown RBP19.61■□□□□ 0.73
ZEB2-225ENST00000558170 C11orf95C9JLR9 678 aaPredicted RBP19.61■□□□□ 0.73
ZEB2-225ENST00000558170 NAIPQ13075 1403 aa19.59■□□□□ 0.73
ZEB2-225ENST00000558170 NUP155O75694 1391 aa19.58■□□□□ 0.73
ZEB2-225ENST00000558170 ST20-MTHFSA0A0A6YYL1 179 aa19.58■□□□□ 0.73
ZEB2-225ENST00000558170 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.57■□□□□ 0.72
ZEB2-225ENST00000558170 RGS3P49796 1198 aa19.57■□□□□ 0.72
ZEB2-225ENST00000558170 USP47Q96K76 1375 aa19.56■□□□□ 0.72
ZEB2-225ENST00000558170 MAP3K1Q13233 1512 aa19.55■□□□□ 0.72
ZEB2-225ENST00000558170 EXOC6Q8TAG9 804 aa19.54■□□□□ 0.72
ZEB2-225ENST00000558170 ARXQ96QS3 562 aa19.54■□□□□ 0.72
ZEB2-225ENST00000558170 PAK3O75914 559 aaPredicted RBP19.53■□□□□ 0.72
ZEB2-225ENST00000558170 GAPVD1Q14C86 1478 aa19.53■□□□□ 0.72
ZEB2-225ENST00000558170 DDRGK1Q96HY6 314 aa19.53■□□□□ 0.72
ZEB2-225ENST00000558170 AKNAQ7Z591 1439 aa19.53■□□□□ 0.72
ZEB2-225ENST00000558170 KNSTRNQ9Y448 316 aa19.52■□□□□ 0.72
ZEB2-225ENST00000558170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.52■□□□□ 0.722e-6■□□□□ 10.3
ZEB2-225ENST00000558170 AQRO60306 1485 aaKnown RBP eCLIP19.52■□□□□ 0.721e-6■■■□□ 19.1
ZEB2-225ENST00000558170 POLA1P09884 1462 aaPredicted RBP19.52■□□□□ 0.72
ZEB2-225ENST00000558170 PPM1GO15355 546 aaPredicted RBP19.52■□□□□ 0.71
ZEB2-225ENST00000558170 CHGAP10645 457 aaKnown RBP19.52■□□□□ 0.71
ZEB2-225ENST00000558170 PLIN1O60240 522 aa19.51■□□□□ 0.71
ZEB2-225ENST00000558170 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
ZEB2-225ENST00000558170 ROCK2O75116 1388 aaKnown RBP19.5■□□□□ 0.71
ZEB2-225ENST00000558170 PTPRKQ15262 1439 aa19.49■□□□□ 0.71
ZEB2-225ENST00000558170 RALBP1Q15311 655 aa19.49■□□□□ 0.71
ZEB2-225ENST00000558170 KTN1Q86UP2 1357 aaKnown RBP19.49■□□□□ 0.71
ZEB2-225ENST00000558170 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
ZEB2-225ENST00000558170 EFCAB5A4FU69 1503 aa19.48■□□□□ 0.71
ZEB2-225ENST00000558170 ANKRD30AQ9BXX3 1397 aa19.47■□□□□ 0.71
ZEB2-225ENST00000558170 NLRP13Q86W25 1043 aa19.46■□□□□ 0.71
ZEB2-225ENST00000558170 RRP1P56182 461 aaKnown RBP19.45■□□□□ 0.7
ZEB2-225ENST00000558170 HNRNPMP52272 730 aaKnown RBP eCLIP19.45■□□□□ 0.7
ZEB2-225ENST00000558170 NEUROD2Q15784 382 aa19.44■□□□□ 0.7
ZEB2-225ENST00000558170 MYBBP1AQ9BQG0 1328 aaKnown RBP19.44■□□□□ 0.7
ZEB2-225ENST00000558170 PDE4AP27815 886 aa19.44■□□□□ 0.7
ZEB2-225ENST00000558170 KIF15Q9NS87 1388 aa19.43■□□□□ 0.7
ZEB2-225ENST00000558170 TMF1P82094 1093 aa19.43■□□□□ 0.7
ZEB2-225ENST00000558170 UPF2Q9HAU5 1272 aaKnown RBP19.41■□□□□ 0.7
ZEB2-225ENST00000558170 SLC4A3P48751 1232 aa19.39■□□□□ 0.69
ZEB2-225ENST00000558170 SENP3Q9H4L4 574 aaPredicted RBP19.38■□□□□ 0.69
ZEB2-225ENST00000558170 PTPN23Q9H3S7 1636 aa19.37■□□□□ 0.69
ZEB2-225ENST00000558170 TNNT2P45379 298 aaPredicted RBP19.36■□□□□ 0.69
ZEB2-225ENST00000558170 FRAT1Q92837 279 aaPredicted RBP19.36■□□□□ 0.69
ZEB2-225ENST00000558170 PNISRQ8TF01 805 aaKnown RBP19.36■□□□□ 0.69
ZEB2-225ENST00000558170 EHBP1L1Q8N3D4 1523 aa19.36■□□□□ 0.69
ZEB2-225ENST00000558170 CDCA7LQ96GN5 454 aa19.35■□□□□ 0.69
ZEB2-225ENST00000558170 CRBNQ96SW2 442 aa19.35■□□□□ 0.69
ZEB2-225ENST00000558170 PDE3BQ13370 1112 aa19.34■□□□□ 0.69
ZEB2-225ENST00000558170 PANK3Q9H999 370 aa19.34■□□□□ 0.69
ZEB2-225ENST00000558170 ABCA10Q8WWZ4 1543 aa19.34■□□□□ 0.69
ZEB2-225ENST00000558170 JPH4Q96JJ6 628 aa19.33■□□□□ 0.68
ZEB2-225ENST00000558170 SUPT6HQ7KZ85 1726 aaKnown RBP19.32■□□□□ 0.68
ZEB2-225ENST00000558170 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
ZEB2-225ENST00000558170 DNMBPQ6XZF7 1577 aa19.31■□□□□ 0.68
ZEB2-225ENST00000558170 CDCA8Q53HL2 280 aa19.31■□□□□ 0.68
ZEB2-225ENST00000558170 NCOA1Q15788 1441 aa19.3■□□□□ 0.68
ZEB2-225ENST00000558170 ANKRD30BQ9BXX2 1392 aa19.3■□□□□ 0.68
ZEB2-225ENST00000558170 CCDC146Q8IYE0 955 aa19.29■□□□□ 0.68
ZEB2-225ENST00000558170 SMG6Q86US8 1419 aaKnown RBP19.29■□□□□ 0.68
ZEB2-225ENST00000558170 URB2Q14146 1524 aaKnown RBP19.29■□□□□ 0.68
ZEB2-225ENST00000558170 MIA2Q96PC5 1412 aa19.27■□□□□ 0.68
ZEB2-225ENST00000558170 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.27■□□□□ 0.68
ZEB2-225ENST00000558170 BECN1Q14457 450 aa19.27■□□□□ 0.67
ZEB2-225ENST00000558170 ANKRD50Q9ULJ7 1429 aa19.26■□□□□ 0.67
ZEB2-225ENST00000558170 DAPK1P53355 1430 aa19.25■□□□□ 0.67
ZEB2-225ENST00000558170 CARMIL2Q6F5E8 1435 aa19.25■□□□□ 0.67
ZEB2-225ENST00000558170 EPRSP07814 1512 aaKnown RBP19.24■□□□□ 0.67
ZEB2-225ENST00000558170 GOLGA2Q08379 1002 aa19.24■□□□□ 0.67
ZEB2-225ENST00000558170 PRDM2Q13029 1718 aa19.24■□□□□ 0.67
ZEB2-225ENST00000558170 HSP90AA1P07900 732 aaKnown RBP19.24■□□□□ 0.67
ZEB2-225ENST00000558170 SKAP1Q86WV1 359 aa19.23■□□□□ 0.67
ZEB2-225ENST00000558170 ARID4BQ4LE39 1312 aaPredicted RBP19.22■□□□□ 0.67
ZEB2-225ENST00000558170 CCDC144AA2RUR9 1427 aa19.22■□□□□ 0.67
ZEB2-225ENST00000558170 NBPF1Q3BBV0 1214 aa19.22■□□□□ 0.67
ZEB2-225ENST00000558170 BRD4O60885 1362 aaPredicted RBP19.21■□□□□ 0.67
ZEB2-225ENST00000558170 SLKQ9H2G2 1235 aaPredicted RBP19.21■□□□□ 0.67
ZEB2-225ENST00000558170 PRG4Q92954 1404 aaPredicted RBP19.21■□□□□ 0.67
ZEB2-225ENST00000558170 KIAA1107Q9UPP5 1409 aa19.2■□□□□ 0.66
ZEB2-225ENST00000558170 MS4A1P11836 297 aa19.2■□□□□ 0.66
ZEB2-225ENST00000558170 SPRYD3Q8NCJ5 442 aa19.19■□□□□ 0.66
ZEB2-225ENST00000558170 CFAP43Q8NDM7 1665 aa19.19■□□□□ 0.66
ZEB2-225ENST00000558170 RPRD2Q5VT52 1461 aaKnown RBP19.18■□□□□ 0.66
ZEB2-225ENST00000558170 USP35Q9P2H5 1018 aa19.17■□□□□ 0.66
ZEB2-225ENST00000558170 ABCC5O15440 1437 aa19.17■□□□□ 0.66
ZEB2-225ENST00000558170 IL27Q8NEV9 243 aa19.17■□□□□ 0.66
ZEB2-225ENST00000558170 ADAMTS8Q9UP79 889 aa19.16■□□□□ 0.66
ZEB2-225ENST00000558170 CUL7Q14999 1698 aa19.15■□□□□ 0.66
ZEB2-225ENST00000558170 BACH2Q9BYV9 841 aa19.15■□□□□ 0.66
ZEB2-225ENST00000558170 SNAPC4Q5SXM2 1469 aa19.15■□□□□ 0.66
ZEB2-225ENST00000558170 HECW1Q76N89 1606 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms