RNA–Protein interactions for RNA: ENST00000558170.6

ZEB2-225, Transcript of zinc finger E-box binding homeobox 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZEB2, Length 4,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-225ENST00000558170 NISCHQ9Y2I1 1504 aa27.51■■□□□ 1.99
ZEB2-225ENST00000558170 SUPT5HO00267 1087 aaKnown RBP25.4■■□□□ 1.66
ZEB2-225ENST00000558170 SHROOM4Q9ULL8 1493 aa25.38■■□□□ 1.65
ZEB2-225ENST00000558170 DCAF8L2P0C7V8 631 aa25.32■■□□□ 1.64
ZEB2-225ENST00000558170 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
ZEB2-225ENST00000558170 EHMT2Q96KQ7 1210 aa23.98■■□□□ 1.43
ZEB2-225ENST00000558170 HRCP23327 699 aa23.9■■□□□ 1.42
ZEB2-225ENST00000558170 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
ZEB2-225ENST00000558170 FAM9AQ8IZU1 332 aaPredicted RBP23.72■■□□□ 1.39
ZEB2-225ENST00000558170 PPARGC1BQ86YN6 1023 aaKnown RBP23.67■■□□□ 1.38
ZEB2-225ENST00000558170 LOC105371045A0A1W2PR82 267 aa23.64■■□□□ 1.38
ZEB2-225ENST00000558170 TRIM41Q8WV44 630 aa23.39■■□□□ 1.33
ZEB2-225ENST00000558170 TRIM26Q12899 539 aaPredicted RBP23.33■■□□□ 1.32
ZEB2-225ENST00000558170 TTBK1Q5TCY1 1321 aaPredicted RBP23.23■■□□□ 1.31
ZEB2-225ENST00000558170 ZEB1P37275 1124 aaPredicted RBP23.19■■□□□ 1.3
ZEB2-225ENST00000558170 MYO15BQ96JP2 1530 aa23.17■■□□□ 1.3
ZEB2-225ENST00000558170 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
ZEB2-225ENST00000558170 CCER1Q8TC90 406 aaPredicted RBP22.99■■□□□ 1.27
ZEB2-225ENST00000558170 ABCC9O60706 1549 aa22.75■■□□□ 1.23
ZEB2-225ENST00000558170 PELP1Q8IZL8 1130 aaKnown RBP22.73■■□□□ 1.23
ZEB2-225ENST00000558170 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
ZEB2-225ENST00000558170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.68■■□□□ 1.22
ZEB2-225ENST00000558170 CCDC180Q9P1Z9 1646 aa22.67■■□□□ 1.22
ZEB2-225ENST00000558170 CENPBP07199 599 aaPredicted RBP22.67■■□□□ 1.22
ZEB2-225ENST00000558170 UBTFP17480 764 aaKnown RBP22.6■■□□□ 1.21
ZEB2-225ENST00000558170 RANGAP1P46060 587 aaPredicted RBP22.58■■□□□ 1.21
ZEB2-225ENST00000558170 YTHDC1Q96MU7 727 aaKnown RBP22.55■■□□□ 1.2
ZEB2-225ENST00000558170 APLP2Q06481 763 aa22.54■■□□□ 1.2
ZEB2-225ENST00000558170 DIEXFQ68CQ4 756 aaKnown RBP22.36■■□□□ 1.17
ZEB2-225ENST00000558170 HNRNPUL2Q1KMD3 747 aaKnown RBP22.26■■□□□ 1.15
ZEB2-225ENST00000558170 SCRIBQ14160 1630 aa22.25■■□□□ 1.15
ZEB2-225ENST00000558170 SCAF1Q9H7N4 1312 aaKnown RBP22.23■■□□□ 1.15
ZEB2-225ENST00000558170 PABPN1Q86U42 306 aaKnown RBP eCLIP22.22■■□□□ 1.15
ZEB2-225ENST00000558170 GTF3C3Q9Y5Q9 886 aa22.2■■□□□ 1.14
ZEB2-225ENST00000558170 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
ZEB2-225ENST00000558170 ACIN1Q9UKV3 1341 aaKnown RBP22.13■■□□□ 1.13
ZEB2-225ENST00000558170 NEUROD1Q13562 356 aa22.04■■□□□ 1.12
ZEB2-225ENST00000558170 ZNF316A6NFI3 1004 aaPredicted RBP21.91■■□□□ 1.1
ZEB2-225ENST00000558170 ITGAEP38570 1179 aa21.88■■□□□ 1.09
ZEB2-225ENST00000558170 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
ZEB2-225ENST00000558170 ATP1B4Q9UN42 357 aaPredicted RBP21.81■■□□□ 1.08
ZEB2-225ENST00000558170 RB1CC1Q8TDY2 1594 aa21.81■■□□□ 1.08
ZEB2-225ENST00000558170 MYT1Q01538 1121 aa21.81■■□□□ 1.08
ZEB2-225ENST00000558170 CECR2Q9BXF3 1484 aa21.74■■□□□ 1.07
ZEB2-225ENST00000558170 MIER1Q8N108 512 aa21.59■■□□□ 1.05
ZEB2-225ENST00000558170 CEP162Q5TB80 1403 aa21.59■■□□□ 1.05
ZEB2-225ENST00000558170 NACADO15069 1562 aa21.53■■□□□ 1.04
ZEB2-225ENST00000558170 MROH2BQ7Z745 1585 aa21.52■■□□□ 1.04
ZEB2-225ENST00000558170 NEFLP07196 543 aa21.51■■□□□ 1.03
ZEB2-225ENST00000558170 BCANQ96GW7 911 aa21.43■■□□□ 1.02
ZEB2-225ENST00000558170 SOGA1O94964 1423 aa21.41■■□□□ 1.02
ZEB2-225ENST00000558170 TNIKQ9UKE5 1360 aa21.38■■□□□ 1.01
ZEB2-225ENST00000558170 ABCC8Q09428 1581 aa21.35■■□□□ 1.01
ZEB2-225ENST00000558170 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
ZEB2-225ENST00000558170 FAM50AQ14320 339 aaKnown RBP21.33■■□□□ 1.01
ZEB2-225ENST00000558170 WIZO95785 1651 aa21.32■■□□□ 1
ZEB2-225ENST00000558170 CLIP1P30622 1438 aa21.32■■□□□ 1
ZEB2-225ENST00000558170 ERICH6Q7L0X2 663 aa21.29■■□□□ 1
ZEB2-225ENST00000558170 GOLGA3Q08378 1498 aa21.28■■□□□ 1
ZEB2-225ENST00000558170 BAZ1AQ9NRL2 1556 aaPredicted RBP21.24■□□□□ 0.99
ZEB2-225ENST00000558170 EEA1Q15075 1411 aa21.23■□□□□ 0.99
ZEB2-225ENST00000558170 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
ZEB2-225ENST00000558170 P3H3Q8IVL6 736 aa21.15■□□□□ 0.98
ZEB2-225ENST00000558170 DDX10Q13206 875 aaKnown RBP21.1■□□□□ 0.97
ZEB2-225ENST00000558170 CNGB1Q14028 1251 aaPredicted RBP21.09■□□□□ 0.97
ZEB2-225ENST00000558170 RUSC2Q8N2Y8 1516 aa21.09■□□□□ 0.97
ZEB2-225ENST00000558170 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
ZEB2-225ENST00000558170 FKBP8Q14318 412 aa21.05■□□□□ 0.96
ZEB2-225ENST00000558170 ANP32CO43423 234 aa21.03■□□□□ 0.96
ZEB2-225ENST00000558170 HIRIP3Q9BW71 556 aaPredicted RBP21.02■□□□□ 0.96
ZEB2-225ENST00000558170 POLR3GLQ9BT43 218 aa20.97■□□□□ 0.95
ZEB2-225ENST00000558170 CLSPNQ9HAW4 1339 aa20.97■□□□□ 0.95
ZEB2-225ENST00000558170 TRIM52Q96A61 297 aa20.96■□□□□ 0.95
ZEB2-225ENST00000558170 VPS8Q8N3P4 1428 aa20.93■□□□□ 0.94
ZEB2-225ENST00000558170 SUPT16HQ9Y5B9 1047 aaKnown RBP20.93■□□□□ 0.94
ZEB2-225ENST00000558170 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
ZEB2-225ENST00000558170 KANK4Q5T7N3 995 aaPredicted RBP20.9■□□□□ 0.94
ZEB2-225ENST00000558170 BAZ1BQ9UIG0 1483 aaKnown RBP20.83■□□□□ 0.92
ZEB2-225ENST00000558170 SIN3AQ96ST3 1273 aa20.81■□□□□ 0.92
ZEB2-225ENST00000558170 RAPGEF2Q9Y4G8 1499 aa20.77■□□□□ 0.92
ZEB2-225ENST00000558170 TONSLQ96HA7 1378 aa20.75■□□□□ 0.91
ZEB2-225ENST00000558170 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
ZEB2-225ENST00000558170 HNRNPUQ00839 825 aaKnown RBP eCLIP20.75■□□□□ 0.911e-7■■■■□ 21.2
ZEB2-225ENST00000558170 SMARCA2P51531 1590 aa20.74■□□□□ 0.91
ZEB2-225ENST00000558170 CDK11AQ9UQ88 783 aaPredicted RBP20.74■□□□□ 0.91
ZEB2-225ENST00000558170 ARID3CA6NKF2 412 aa20.73■□□□□ 0.91
ZEB2-225ENST00000558170 CCNB3Q8WWL7 1395 aa20.72■□□□□ 0.91
ZEB2-225ENST00000558170 IRX6P78412 446 aaPredicted RBP20.71■□□□□ 0.91
ZEB2-225ENST00000558170 KCNH8Q96L42 1107 aa20.69■□□□□ 0.9
ZEB2-225ENST00000558170 DHX57Q6P158 1386 aaKnown RBP20.68■□□□□ 0.9
ZEB2-225ENST00000558170 KIF27Q86VH2 1401 aa20.67■□□□□ 0.9
ZEB2-225ENST00000558170 ZNF326Q5BKZ1 582 aaKnown RBP20.63■□□□□ 0.89
ZEB2-225ENST00000558170 ANP32EQ9BTT0 268 aa20.62■□□□□ 0.89
ZEB2-225ENST00000558170 CHIC2Q9UKJ5 165 aa20.62■□□□□ 0.89
ZEB2-225ENST00000558170 TSHZ2Q9NRE2 1034 aa20.61■□□□□ 0.89
ZEB2-225ENST00000558170 FAM9BQ8IZU0 186 aa20.58■□□□□ 0.89
ZEB2-225ENST00000558170 RAB3GAP2Q9H2M9 1393 aa20.57■□□□□ 0.88
ZEB2-225ENST00000558170 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
ZEB2-225ENST00000558170 MTUS2Q5JR59 1369 aa20.51■□□□□ 0.87
ZEB2-225ENST00000558170 RRP7BPQ9NSQ0 103 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms