RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 FHOD3Q2V2M9 1422 aa22.27■■□□□ 1.16
ABCD4-226ENST00000556971 RGS17Q9UGC6 210 aaPredicted RBP22.22■■□□□ 1.15
ABCD4-226ENST00000556971 CAMSAP1Q5T5Y3 1602 aa22.17■■□□□ 1.14
ABCD4-226ENST00000556971 SETD1AO15047 1707 aaKnown RBP22.15■■□□□ 1.14
ABCD4-226ENST00000556971 ATP10BO94823 1461 aa22.15■■□□□ 1.14
ABCD4-226ENST00000556971 C3P01024 1663 aa22.14■■□□□ 1.14
ABCD4-226ENST00000556971 HECW1Q76N89 1606 aa22.14■■□□□ 1.14
ABCD4-226ENST00000556971 MAGI2Q86UL8 1455 aa22.14■■□□□ 1.13
ABCD4-226ENST00000556971 TOM1O60784 492 aa22.12■■□□□ 1.13
ABCD4-226ENST00000556971 NCKAP5LQ9HCH0 1330 aa22.11■■□□□ 1.13
ABCD4-226ENST00000556971 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
ABCD4-226ENST00000556971 C9orf84Q5VXU9 1444 aa22.09■■□□□ 1.13
ABCD4-226ENST00000556971 CFAP74Q9C0B2 1584 aa22.08■■□□□ 1.13
ABCD4-226ENST00000556971 ATP10AO60312 1499 aa22.06■■□□□ 1.12
ABCD4-226ENST00000556971 TRAPPC8Q9Y2L5 1435 aa22.05■■□□□ 1.12
ABCD4-226ENST00000556971 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
ABCD4-226ENST00000556971 SRCAPQ6ZRS2 3230 aa22.03■■□□□ 1.12
ABCD4-226ENST00000556971 POTEAQ6S8J7 498 aa22.03■■□□□ 1.12
ABCD4-226ENST00000556971 ALKQ9UM73 1620 aa21.99■■□□□ 1.11
ABCD4-226ENST00000556971 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
ABCD4-226ENST00000556971 CTTNBP2Q8WZ74 1663 aa21.94■■□□□ 1.1
ABCD4-226ENST00000556971 PPP6R1Q9UPN7 881 aa21.93■■□□□ 1.1
ABCD4-226ENST00000556971 CPS1P31327 1500 aa21.92■■□□□ 1.1
ABCD4-226ENST00000556971 PTPRKQ15262 1439 aa21.9■■□□□ 1.1
ABCD4-226ENST00000556971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.9■■□□□ 1.1
ABCD4-226ENST00000556971 PKD2Q13563 968 aa21.9■■□□□ 1.1
ABCD4-226ENST00000556971 HNRNPUL2Q1KMD3 747 aaKnown RBP21.9■■□□□ 1.1
ABCD4-226ENST00000556971 PLA2R1Q13018 1463 aa21.9■■□□□ 1.1
ABCD4-226ENST00000556971 TCOF1Q13428 1488 aaKnown RBP21.9■■□□□ 1.1
ABCD4-226ENST00000556971 SUPT6HQ7KZ85 1726 aaKnown RBP21.89■■□□□ 1.09
ABCD4-226ENST00000556971 SCAPERQ9BY12 1400 aa21.89■■□□□ 1.09
ABCD4-226ENST00000556971 UPF1Q92900 1129 aaKnown RBP eCLIP21.85■■□□□ 1.09
ABCD4-226ENST00000556971 ESF1Q9H501 851 aaKnown RBP21.85■■□□□ 1.09
ABCD4-226ENST00000556971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.09
ABCD4-226ENST00000556971 ZNF142P52746 1687 aaPredicted RBP21.83■■□□□ 1.09
ABCD4-226ENST00000556971 SHANK2Q9UPX8 1470 aa21.81■■□□□ 1.08
ABCD4-226ENST00000556971 NPATQ14207 1427 aa21.8■■□□□ 1.08
ABCD4-226ENST00000556971 MYO3AQ8NEV4 1616 aa21.8■■□□□ 1.08
ABCD4-226ENST00000556971 RAPGEF6Q8TEU7 1601 aa21.8■■□□□ 1.08
ABCD4-226ENST00000556971 DIP2CQ9Y2E4 1556 aa21.78■■□□□ 1.08
ABCD4-226ENST00000556971 CEP170BQ9Y4F5 1589 aaPredicted RBP21.77■■□□□ 1.08
ABCD4-226ENST00000556971 P3H3Q8IVL6 736 aa21.76■■□□□ 1.07
ABCD4-226ENST00000556971 FAM9AQ8IZU1 332 aaPredicted RBP21.76■■□□□ 1.07
ABCD4-226ENST00000556971 CNTLNQ9NXG0 1405 aa21.75■■□□□ 1.07
ABCD4-226ENST00000556971 AGLP35573 1532 aa21.75■■□□□ 1.07
ABCD4-226ENST00000556971 REREQ9P2R6 1566 aa21.74■■□□□ 1.07
ABCD4-226ENST00000556971 NUP153P49790 1475 aaKnown RBP21.71■■□□□ 1.07
ABCD4-226ENST00000556971 ABCA6Q8N139 1617 aa21.69■■□□□ 1.06
ABCD4-226ENST00000556971 MYT1LQ9UL68 1186 aa21.69■■□□□ 1.06
ABCD4-226ENST00000556971 MROH2AA6NES4 1674 aa21.69■■□□□ 1.06
ABCD4-226ENST00000556971 VWDEQ8N2E2 1590 aa21.68■■□□□ 1.06
ABCD4-226ENST00000556971 RNF17Q9BXT8 1623 aaKnown RBP21.68■■□□□ 1.06
ABCD4-226ENST00000556971 POLR1AO95602 1720 aaPredicted RBP21.67■■□□□ 1.06
ABCD4-226ENST00000556971 KDM5CP41229 1560 aa21.67■■□□□ 1.06
ABCD4-226ENST00000556971 NEURL4Q96JN8 1562 aa21.67■■□□□ 1.06
ABCD4-226ENST00000556971 ZNF518AQ6AHZ1 1483 aa21.66■■□□□ 1.06
ABCD4-226ENST00000556971 PLEKHD1A6NEE1 506 aa21.66■■□□□ 1.06
ABCD4-226ENST00000556971 ZMYM3Q14202 1370 aa21.62■■□□□ 1.05
ABCD4-226ENST00000556971 PLCH2O75038 1416 aa21.62■■□□□ 1.05
ABCD4-226ENST00000556971 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
ABCD4-226ENST00000556971 AFAP1Q8N556 730 aa21.6■■□□□ 1.05
ABCD4-226ENST00000556971 TRIM52Q96A61 297 aa21.59■■□□□ 1.05
ABCD4-226ENST00000556971 LRRC7Q96NW7 1537 aa21.57■■□□□ 1.04
ABCD4-226ENST00000556971 DNMT1P26358 1616 aaKnown RBP21.55■■□□□ 1.04
ABCD4-226ENST00000556971 STRCP1A6NGW2 1772 aa21.54■■□□□ 1.04
ABCD4-226ENST00000556971 CLTCQ00610 1675 aaKnown RBP21.53■■□□□ 1.04
ABCD4-226ENST00000556971 SYNMO15061 1565 aa21.52■■□□□ 1.04
ABCD4-226ENST00000556971 MYO5CQ9NQX4 1742 aa21.52■■□□□ 1.03
ABCD4-226ENST00000556971 A2ML1A8K2U0 1454 aa21.52■■□□□ 1.03
ABCD4-226ENST00000556971 EFCAB2Q5VUJ9 269 aa21.51■■□□□ 1.03
ABCD4-226ENST00000556971 SAMD9Q5K651 1589 aa21.49■■□□□ 1.03
ABCD4-226ENST00000556971 MLH3Q9UHC1 1453 aa21.49■■□□□ 1.03
ABCD4-226ENST00000556971 SETBP1Q9Y6X0 1596 aa21.43■■□□□ 1.02
ABCD4-226ENST00000556971 NPHP4O75161 1426 aaPredicted RBP21.41■■□□□ 1.02
ABCD4-226ENST00000556971 ARHGAP5Q13017 1502 aa21.4■■□□□ 1.02
ABCD4-226ENST00000556971 KIDINS220Q9ULH0 1771 aa21.39■■□□□ 1.01
ABCD4-226ENST00000556971 CDK13Q14004 1512 aaKnown RBP21.39■■□□□ 1.01
ABCD4-226ENST00000556971 FAM135BQ49AJ0 1406 aa21.38■■□□□ 1.01
ABCD4-226ENST00000556971 IQGAP1P46940 1657 aa21.37■■□□□ 1.01
ABCD4-226ENST00000556971 ANKLE2Q86XL3 938 aa21.36■■□□□ 1.01
ABCD4-226ENST00000556971 ITSN2Q9NZM3 1697 aa21.36■■□□□ 1.01
ABCD4-226ENST00000556971 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.35■■□□□ 1.01
ABCD4-226ENST00000556971 MED14O60244 1454 aa21.34■■□□□ 1.01
ABCD4-226ENST00000556971 ROBO1Q9Y6N7 1651 aa21.34■■□□□ 1.01
ABCD4-226ENST00000556971 XIRP1Q702N8 1843 aaKnown RBP21.33■■□□□ 1.01
ABCD4-226ENST00000556971 ABCC1P33527 1531 aa21.33■■□□□ 1
ABCD4-226ENST00000556971 DEPDC5O75140 1603 aa21.33■■□□□ 1
ABCD4-226ENST00000556971 ZNF772Q68DY9 489 aaPredicted RBP21.32■■□□□ 1
ABCD4-226ENST00000556971 ZRANB1Q9UGI0 708 aa21.32■■□□□ 1
ABCD4-226ENST00000556971 RBM33Q96EV2 1170 aaKnown RBP21.31■■□□□ 1
ABCD4-226ENST00000556971 KIF14Q15058 1648 aa21.3■■□□□ 1
ABCD4-226ENST00000556971 IFFO2Q5TF58 517 aa21.3■■□□□ 1
ABCD4-226ENST00000556971 LRP6O75581 1613 aa21.29■■□□□ 1
ABCD4-226ENST00000556971 CDK12Q9NYV4 1490 aaPredicted RBP21.29■■□□□ 1
ABCD4-226ENST00000556971 RXRBP28702 533 aa21.29■■□□□ 1
ABCD4-226ENST00000556971 PRXQ9BXM0 1461 aa21.27■■□□□ 1
ABCD4-226ENST00000556971 MEX3CQ5U5Q3 659 aaKnown RBP21.26■□□□□ 0.99
ABCD4-226ENST00000556971 JCADQ9P266 1359 aa21.25■□□□□ 0.99
ABCD4-226ENST00000556971 TNRQ92752 1358 aa21.24■□□□□ 0.99
ABCD4-226ENST00000556971 PHLPP1O60346 1717 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms