RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 NISCHQ9Y2I1 1504 aa32.6■■■□□ 2.81
ABCD4-226ENST00000556971 ABCC9O60706 1549 aa31.81■■■□□ 2.68
ABCD4-226ENST00000556971 DNAJC5BQ9UF47 199 aa31.36■■■□□ 2.61
ABCD4-226ENST00000556971 CCDC180Q9P1Z9 1646 aa30.02■■■□□ 2.4
ABCD4-226ENST00000556971 DNAJC5Q9H3Z4 198 aa30.01■■■□□ 2.39
ABCD4-226ENST00000556971 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
ABCD4-226ENST00000556971 PABPN1Q86U42 306 aaKnown RBP eCLIP29.32■■■□□ 2.28
ABCD4-226ENST00000556971 UNC13AQ9UPW8 1703 aa28.83■■■□□ 2.21
ABCD4-226ENST00000556971 CECR2Q9BXF3 1484 aa28.81■■■□□ 2.2
ABCD4-226ENST00000556971 NACADO15069 1562 aa28.77■■■□□ 2.2
ABCD4-226ENST00000556971 BICRAQ9NZM4 1560 aa28.68■■■□□ 2.18
ABCD4-226ENST00000556971 CC2D2AQ9P2K1 1620 aa28.62■■■□□ 2.17
ABCD4-226ENST00000556971 DCAF8L2P0C7V8 631 aa28.29■■■□□ 2.12
ABCD4-226ENST00000556971 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
ABCD4-226ENST00000556971 TRIM41Q8WV44 630 aa28.08■■■□□ 2.09
ABCD4-226ENST00000556971 CUX2O14529 1486 aa28.07■■■□□ 2.08
ABCD4-226ENST00000556971 SHROOM4Q9ULL8 1493 aa28.01■■■□□ 2.07
ABCD4-226ENST00000556971 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
ABCD4-226ENST00000556971 ERCC6Q03468 1493 aa27.58■■■□□ 2.01
ABCD4-226ENST00000556971 SCRIBQ14160 1630 aa27.35■■□□□ 1.97
ABCD4-226ENST00000556971 THOC2Q8NI27 1593 aaKnown RBP26.92■■□□□ 1.9
ABCD4-226ENST00000556971 NESP48681 1621 aa26.84■■□□□ 1.89
ABCD4-226ENST00000556971 AEBP2Q6ZN18 517 aaPredicted RBP26.82■■□□□ 1.88
ABCD4-226ENST00000556971 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
ABCD4-226ENST00000556971 ZCCHC6Q5VYS8 1495 aaKnown RBP26.67■■□□□ 1.86
ABCD4-226ENST00000556971 SMARCA2P51531 1590 aa26.64■■□□□ 1.86
ABCD4-226ENST00000556971 NCAPD3P42695 1498 aa26.56■■□□□ 1.84
ABCD4-226ENST00000556971 BAZ1AQ9NRL2 1556 aaPredicted RBP26.56■■□□□ 1.84
ABCD4-226ENST00000556971 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
ABCD4-226ENST00000556971 OSCARQ8IYS5 282 aa26.43■■□□□ 1.82
ABCD4-226ENST00000556971 RIMBP3CA6NJZ7 1639 aa26.42■■□□□ 1.82
ABCD4-226ENST00000556971 RIMBP3BA6NNM3 1639 aa26.42■■□□□ 1.82
ABCD4-226ENST00000556971 RIMBP3Q9UFD9 1639 aa26.42■■□□□ 1.82
ABCD4-226ENST00000556971 TRHP20396 242 aaPredicted RBP26.3■■□□□ 1.8
ABCD4-226ENST00000556971 ATAD2BQ9ULI0 1458 aa26.29■■□□□ 1.8
ABCD4-226ENST00000556971 LAMC3Q9Y6N6 1575 aa26.27■■□□□ 1.8
ABCD4-226ENST00000556971 HMGXB3Q12766 1538 aa26.25■■□□□ 1.79
ABCD4-226ENST00000556971 PDS5BQ9NTI5 1447 aa26.16■■□□□ 1.78
ABCD4-226ENST00000556971 ARHGEF11O15085 1522 aa26.13■■□□□ 1.77
ABCD4-226ENST00000556971 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
ABCD4-226ENST00000556971 WDR62O43379 1518 aa26.1■■□□□ 1.77
ABCD4-226ENST00000556971 ILDR1Q86SU0 546 aaPredicted RBP26.05■■□□□ 1.76
ABCD4-226ENST00000556971 CYB5RLQ6IPT4 315 aa26■■□□□ 1.75
ABCD4-226ENST00000556971 BAZ1BQ9UIG0 1483 aaKnown RBP25.96■■□□□ 1.75
ABCD4-226ENST00000556971 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
ABCD4-226ENST00000556971 ARAP1Q96P48 1450 aa25.78■■□□□ 1.72
ABCD4-226ENST00000556971 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
ABCD4-226ENST00000556971 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
ABCD4-226ENST00000556971 PEG3Q9GZU2 1588 aa25.54■■□□□ 1.68
ABCD4-226ENST00000556971 FANCD2Q9BXW9 1451 aa25.46■■□□□ 1.67
ABCD4-226ENST00000556971 URB2Q14146 1524 aaKnown RBP25.38■■□□□ 1.65
ABCD4-226ENST00000556971 ZNF608Q9ULD9 1512 aaPredicted RBP25.38■■□□□ 1.65
ABCD4-226ENST00000556971 RSF1Q96T23 1441 aaPredicted RBP25.35■■□□□ 1.65
ABCD4-226ENST00000556971 CHD1O14646 1710 aa25.32■■□□□ 1.64
ABCD4-226ENST00000556971 IFT140Q96RY7 1462 aa25.17■■□□□ 1.62
ABCD4-226ENST00000556971 EIF4G3O43432 1585 aaKnown RBP25.16■■□□□ 1.62
ABCD4-226ENST00000556971 MROH2BQ7Z745 1585 aa25.15■■□□□ 1.62
ABCD4-226ENST00000556971 FBLN2P98095 1184 aa25.08■■□□□ 1.61
ABCD4-226ENST00000556971 CFTRP13569 1480 aa25.03■■□□□ 1.6
ABCD4-226ENST00000556971 KDM4FA0A1W2PPD8 638 aa24.99■■□□□ 1.59
ABCD4-226ENST00000556971 CLASP1Q7Z460 1538 aa24.94■■□□□ 1.58
ABCD4-226ENST00000556971 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.587e-8■■■■■ 35.6
ABCD4-226ENST00000556971 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
ABCD4-226ENST00000556971 WIZO95785 1651 aa24.78■■□□□ 1.56
ABCD4-226ENST00000556971 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
ABCD4-226ENST00000556971 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
ABCD4-226ENST00000556971 SYNJ1O43426 1573 aa24.75■■□□□ 1.55
ABCD4-226ENST00000556971 KIF13AQ9H1H9 1805 aa24.75■■□□□ 1.55
ABCD4-226ENST00000556971 FBXO41Q8TF61 875 aa24.7■■□□□ 1.54
ABCD4-226ENST00000556971 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
ABCD4-226ENST00000556971 TARBP1Q13395 1621 aaKnown RBP24.69■■□□□ 1.54
ABCD4-226ENST00000556971 HECW2Q9P2P5 1572 aa24.68■■□□□ 1.54
ABCD4-226ENST00000556971 LMTK3Q96Q04 1460 aa24.68■■□□□ 1.54
ABCD4-226ENST00000556971 SNAPC4Q5SXM2 1469 aa24.62■■□□□ 1.53
ABCD4-226ENST00000556971 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
ABCD4-226ENST00000556971 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
ABCD4-226ENST00000556971 KDM6BO15054 1643 aa24.5■■□□□ 1.51
ABCD4-226ENST00000556971 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
ABCD4-226ENST00000556971 SOCS7O14512 581 aa24.46■■□□□ 1.51
ABCD4-226ENST00000556971 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.5
ABCD4-226ENST00000556971 ADGRL1O94910 1474 aa24.43■■□□□ 1.5
ABCD4-226ENST00000556971 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
ABCD4-226ENST00000556971 MAGI1Q96QZ7 1491 aaPredicted RBP24.41■■□□□ 1.5
ABCD4-226ENST00000556971 RAD54L2Q9Y4B4 1467 aa24.39■■□□□ 1.5
ABCD4-226ENST00000556971 ILDR2Q71H61 639 aa24.37■■□□□ 1.49
ABCD4-226ENST00000556971 SYNJ2O15056 1496 aa24.37■■□□□ 1.49
ABCD4-226ENST00000556971 FAM69CQ0P6D2 419 aa24.36■■□□□ 1.49
ABCD4-226ENST00000556971 TOP2AP11388 1531 aaKnown RBP24.31■■□□□ 1.48
ABCD4-226ENST00000556971 ABCC10Q5T3U5 1492 aa24.31■■□□□ 1.48
ABCD4-226ENST00000556971 DIP2BQ9P265 1576 aa24.25■■□□□ 1.47
ABCD4-226ENST00000556971 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
ABCD4-226ENST00000556971 GRIN2BQ13224 1484 aa24.24■■□□□ 1.47
ABCD4-226ENST00000556971 SOGA1O94964 1423 aa24.23■■□□□ 1.47
ABCD4-226ENST00000556971 TSPOAP1O95153 1857 aa24.22■■□□□ 1.47
ABCD4-226ENST00000556971 CEP170Q5SW79 1584 aa24.2■■□□□ 1.47
ABCD4-226ENST00000556971 DISP3Q9P2K9 1392 aa24.17■■□□□ 1.46
ABCD4-226ENST00000556971 MAPKBP1O60336 1514 aa24.1■■□□□ 1.45
ABCD4-226ENST00000556971 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
ABCD4-226ENST00000556971 CCDC88BA6NC98 1476 aa24.03■■□□□ 1.44
ABCD4-226ENST00000556971 FGD5Q6ZNL6 1462 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms