RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 KCNH8Q96L42 1107 aa15.46■□□□□ 0.07
MARK3-211ENST00000556744 ARID3CA6NKF2 412 aa15.45■□□□□ 0.06
MARK3-211ENST00000556744 KDM6BO15054 1643 aa15.45■□□□□ 0.06
MARK3-211ENST00000556744 ABCA9Q8IUA7 1624 aa15.45■□□□□ 0.06
MARK3-211ENST00000556744 MKRN4PQ13434 485 aaPredicted RBP15.43■□□□□ 0.06
MARK3-211ENST00000556744 COL17A1Q9UMD9 1497 aaPredicted RBP15.43■□□□□ 0.06
MARK3-211ENST00000556744 PLEKHD1A6NEE1 506 aa15.42■□□□□ 0.06
MARK3-211ENST00000556744 HECW1Q76N89 1606 aa15.4■□□□□ 0.06
MARK3-211ENST00000556744 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
MARK3-211ENST00000556744 CLIP1P30622 1438 aa15.4■□□□□ 0.06
MARK3-211ENST00000556744 CDK13Q14004 1512 aaKnown RBP15.39■□□□□ 0.05
MARK3-211ENST00000556744 CASKIN1Q8WXD9 1431 aa15.39■□□□□ 0.05
MARK3-211ENST00000556744 PHLDB1Q86UU1 1377 aa15.38■□□□□ 0.05
MARK3-211ENST00000556744 RTN4Q9NQC3 1192 aaKnown RBP15.37■□□□□ 0.05
MARK3-211ENST00000556744 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
MARK3-211ENST00000556744 ARAP3Q8WWN8 1544 aa15.36■□□□□ 0.05
MARK3-211ENST00000556744 LRRIQ1Q96JM4 1722 aa15.35■□□□□ 0.05
MARK3-211ENST00000556744 NEO1Q92859 1461 aa15.34■□□□□ 0.05
MARK3-211ENST00000556744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.34■□□□□ 0.05
MARK3-211ENST00000556744 CDK11AQ9UQ88 783 aaPredicted RBP15.33■□□□□ 0.04
MARK3-211ENST00000556744 FYCO1Q9BQS8 1478 aa15.33■□□□□ 0.04
MARK3-211ENST00000556744 PCF11O94913 1555 aaKnown RBP15.32■□□□□ 0.04
MARK3-211ENST00000556744 CCDC18Q5T9S5 1454 aa15.32■□□□□ 0.04
MARK3-211ENST00000556744 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
MARK3-211ENST00000556744 CEP162Q5TB80 1403 aa15.31■□□□□ 0.04
MARK3-211ENST00000556744 TTC37Q6PGP7 1564 aa15.3■□□□□ 0.04
MARK3-211ENST00000556744 ATP1B4Q9UN42 357 aaPredicted RBP15.29■□□□□ 0.04
MARK3-211ENST00000556744 PLCH2O75038 1416 aa15.28■□□□□ 0.04
MARK3-211ENST00000556744 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
MARK3-211ENST00000556744 ABCB7O75027 752 aa15.28■□□□□ 0.04
MARK3-211ENST00000556744 FBXO3Q9UK99 471 aa15.28■□□□□ 0.04
MARK3-211ENST00000556744 FANCAO15360 1455 aa15.25■□□□□ 0.03
MARK3-211ENST00000556744 AKNAQ7Z591 1439 aa15.25■□□□□ 0.03
MARK3-211ENST00000556744 KIF14Q15058 1648 aa15.25■□□□□ 0.03
MARK3-211ENST00000556744 CFAP74Q9C0B2 1584 aa15.24■□□□□ 0.03
MARK3-211ENST00000556744 PROM2Q8N271 834 aa15.22■□□□□ 0.03
MARK3-211ENST00000556744 FRMPD1Q5SYB0 1578 aa15.22■□□□□ 0.03
MARK3-211ENST00000556744 MYO5CQ9NQX4 1742 aa15.2■□□□□ 0.02
MARK3-211ENST00000556744 KDM4FA0A1W2PPD8 638 aa15.2■□□□□ 0.02
MARK3-211ENST00000556744 RAPGEF3O95398 923 aa15.2■□□□□ 0.02
MARK3-211ENST00000556744 DENND4BO75064 1496 aaPredicted RBP15.2■□□□□ 0.02
MARK3-211ENST00000556744 EFCAB2Q5VUJ9 269 aa15.19■□□□□ 0.02
MARK3-211ENST00000556744 RICTORQ6R327 1708 aa15.19■□□□□ 0.02
MARK3-211ENST00000556744 DSG3P32926 999 aa15.17■□□□□ 0.02
MARK3-211ENST00000556744 CDC42BPBQ9Y5S2 1711 aa15.16■□□□□ 0.02
MARK3-211ENST00000556744 ZMYM4Q5VZL5 1548 aa15.16■□□□□ 0.02
MARK3-211ENST00000556744 VPS8Q8N3P4 1428 aa15.16■□□□□ 0.02
MARK3-211ENST00000556744 ADGRL1O94910 1474 aa15.15■□□□□ 0.02
MARK3-211ENST00000556744 SCAPERQ9BY12 1400 aa15.15■□□□□ 0.02
MARK3-211ENST00000556744 MAGI2Q86UL8 1455 aa15.14■□□□□ 0.01
MARK3-211ENST00000556744 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
MARK3-211ENST00000556744 POGZQ7Z3K3 1410 aa15.14■□□□□ 0.01
MARK3-211ENST00000556744 CDC42BPAQ5VT25 1732 aa15.13■□□□□ 0.01
MARK3-211ENST00000556744 GPATCH8Q9UKJ3 1502 aaKnown RBP15.12■□□□□ 0.01
MARK3-211ENST00000556744 ARHGAP5Q13017 1502 aa15.12■□□□□ 0.01
MARK3-211ENST00000556744 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
MARK3-211ENST00000556744 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
MARK3-211ENST00000556744 EHBP1L1Q8N3D4 1523 aa15.1■□□□□ 0.01
MARK3-211ENST00000556744 ARHGEF40Q8TER5 1519 aa15.1■□□□□ 0.01
MARK3-211ENST00000556744 KDM5CP41229 1560 aa15.09■□□□□ 0.01
MARK3-211ENST00000556744 ARHGEF12Q9NZN5 1544 aa15.08■□□□□ 0.01
MARK3-211ENST00000556744 TIAM1Q13009 1591 aa15.08■□□□□ 0
MARK3-211ENST00000556744 ZNF518AQ6AHZ1 1483 aa15.08■□□□□ 0
MARK3-211ENST00000556744 ABCC1P33527 1531 aa15.07■□□□□ 0
MARK3-211ENST00000556744 YEATS2Q9ULM3 1422 aa15.06■□□□□ 0
MARK3-211ENST00000556744 KIAA1107Q9UPP5 1409 aa15.06■□□□□ 0
MARK3-211ENST00000556744 ZFYVE16Q7Z3T8 1539 aa15.06■□□□□ 0
MARK3-211ENST00000556744 AFAP1Q8N556 730 aa15.05■□□□□ -0
MARK3-211ENST00000556744 MLH3Q9UHC1 1453 aa15.05■□□□□ -0
MARK3-211ENST00000556744 SAMD9LQ8IVG5 1584 aa15.04■□□□□ -0
MARK3-211ENST00000556744 TRAPPC8Q9Y2L5 1435 aa15.04■□□□□ -0
MARK3-211ENST00000556744 CCNB3Q8WWL7 1395 aa15.04■□□□□ -0
MARK3-211ENST00000556744 ADAMTSL3P82987 1691 aa15.03■□□□□ -0
MARK3-211ENST00000556744 ITSN2Q9NZM3 1697 aa15.03■□□□□ -0
MARK3-211ENST00000556744 LRRC9Q6ZRR7 1453 aa15.03■□□□□ -0
MARK3-211ENST00000556744 ATP10AO60312 1499 aa15.02■□□□□ -0
MARK3-211ENST00000556744 PLEKHH2Q8IVE3 1493 aa15.02■□□□□ -0
MARK3-211ENST00000556744 CFDP1Q9UEE9 299 aaPredicted RBP15.02■□□□□ -0
MARK3-211ENST00000556744 NCOA2Q15596 1464 aa15.01□□□□□ -0.01
MARK3-211ENST00000556744 BCORL1Q5H9F3 1711 aa15.01□□□□□ -0.01
MARK3-211ENST00000556744 SUPT6HQ7KZ85 1726 aaKnown RBP15.01□□□□□ -0.01
MARK3-211ENST00000556744 SIGLEC1Q9BZZ2 1709 aa15□□□□□ -0.01
MARK3-211ENST00000556744 HECW2Q9P2P5 1572 aa15□□□□□ -0.01
MARK3-211ENST00000556744 REREQ9P2R6 1566 aa15□□□□□ -0.01
MARK3-211ENST00000556744 VASPP50552 380 aaPredicted RBP14.99□□□□□ -0.01
MARK3-211ENST00000556744 MBD5Q9P267 1494 aa14.98□□□□□ -0.01
MARK3-211ENST00000556744 CACNB1Q02641 598 aaPredicted RBP14.98□□□□□ -0.01
MARK3-211ENST00000556744 KANK4Q5T7N3 995 aaPredicted RBP14.98□□□□□ -0.01
MARK3-211ENST00000556744 C9orf84Q5VXU9 1444 aa14.98□□□□□ -0.01
MARK3-211ENST00000556744 SYCP2Q9BX26 1530 aa14.97□□□□□ -0.01
MARK3-211ENST00000556744 KIDINS220Q9ULH0 1771 aa14.97□□□□□ -0.01
MARK3-211ENST00000556744 DIP2CQ9Y2E4 1556 aa14.97□□□□□ -0.01
MARK3-211ENST00000556744 SPDYE2BA6NHP3 402 aa14.96□□□□□ -0.01
MARK3-211ENST00000556744 SPDYE6P0CI01 402 aa14.96□□□□□ -0.01
MARK3-211ENST00000556744 HNRNPMP52272 730 aaKnown RBP eCLIP14.96□□□□□ -0.012e-7■■■■■ 29.2
MARK3-211ENST00000556744 SPDYE2Q495Y8 402 aa14.96□□□□□ -0.01
MARK3-211ENST00000556744 ZNF777Q9ULD5 760 aaPredicted RBP14.96□□□□□ -0.01
MARK3-211ENST00000556744 ZNF644Q9H582 1327 aaPredicted RBP14.95□□□□□ -0.02
MARK3-211ENST00000556744 ZNF692Q9BU19 519 aaPredicted RBP14.95□□□□□ -0.02
MARK3-211ENST00000556744 ABCA6Q8N139 1617 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms