RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
MARK3-211ENST00000556744 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
MARK3-211ENST00000556744 NISCHQ9Y2I1 1504 aa23.33■■□□□ 1.33
MARK3-211ENST00000556744 PHF23Q9BUL5 403 aaPredicted RBP22.54■■□□□ 1.2
MARK3-211ENST00000556744 SENP3Q9H4L4 574 aaPredicted RBP21.78■■□□□ 1.08
MARK3-211ENST00000556744 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
MARK3-211ENST00000556744 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
MARK3-211ENST00000556744 ABCC9O60706 1549 aa20.33■□□□□ 0.85
MARK3-211ENST00000556744 FOXD1Q16676 465 aa20.08■□□□□ 0.81
MARK3-211ENST00000556744 ADRA2BP18089 450 aa19.73■□□□□ 0.75
MARK3-211ENST00000556744 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
MARK3-211ENST00000556744 NACADO15069 1562 aa19.57■□□□□ 0.72
MARK3-211ENST00000556744 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
MARK3-211ENST00000556744 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
MARK3-211ENST00000556744 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
MARK3-211ENST00000556744 DCAF1Q9Y4B6 1507 aa19.37■□□□□ 0.69
MARK3-211ENST00000556744 DCAF8L2P0C7V8 631 aa19.37■□□□□ 0.69
MARK3-211ENST00000556744 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
MARK3-211ENST00000556744 PIAS4Q8N2W9 510 aaPredicted RBP19.09■□□□□ 0.65
MARK3-211ENST00000556744 BICRAQ9NZM4 1560 aa19.04■□□□□ 0.64
MARK3-211ENST00000556744 PABPN1Q86U42 306 aaKnown RBP eCLIP18.98■□□□□ 0.63
MARK3-211ENST00000556744 SHROOM4Q9ULL8 1493 aa18.86■□□□□ 0.61
MARK3-211ENST00000556744 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
MARK3-211ENST00000556744 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.6
MARK3-211ENST00000556744 KCNA4P22459 653 aa18.75■□□□□ 0.59
MARK3-211ENST00000556744 PPP4R3CPQ6ZMV5 832 aa18.62■□□□□ 0.57
MARK3-211ENST00000556744 EIF4G1Q04637 1599 aaKnown RBP18.5■□□□□ 0.55
MARK3-211ENST00000556744 CC2D2AQ9P2K1 1620 aa18.43■□□□□ 0.54
MARK3-211ENST00000556744 MSH5O43196 834 aa18.39■□□□□ 0.53
MARK3-211ENST00000556744 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
MARK3-211ENST00000556744 CECR2Q9BXF3 1484 aa18.32■□□□□ 0.52
MARK3-211ENST00000556744 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
MARK3-211ENST00000556744 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
MARK3-211ENST00000556744 NCAPD3P42695 1498 aa18.09■□□□□ 0.49
MARK3-211ENST00000556744 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
MARK3-211ENST00000556744 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
MARK3-211ENST00000556744 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
MARK3-211ENST00000556744 SMARCA2P51531 1590 aa18.01■□□□□ 0.47
MARK3-211ENST00000556744 CNKSR2Q8WXI2 1034 aa18.01■□□□□ 0.47
MARK3-211ENST00000556744 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
MARK3-211ENST00000556744 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
MARK3-211ENST00000556744 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
MARK3-211ENST00000556744 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
MARK3-211ENST00000556744 MROH2BQ7Z745 1585 aa17.96■□□□□ 0.46
MARK3-211ENST00000556744 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.45
MARK3-211ENST00000556744 RSF1Q96T23 1441 aaPredicted RBP17.74■□□□□ 0.43
MARK3-211ENST00000556744 WIZO95785 1651 aa17.73■□□□□ 0.43
MARK3-211ENST00000556744 MAPK8IP2Q13387 824 aaPredicted RBP17.72■□□□□ 0.43
MARK3-211ENST00000556744 CSRNP3Q8WYN3 585 aa17.6■□□□□ 0.41
MARK3-211ENST00000556744 NESP48681 1621 aa17.59■□□□□ 0.41
MARK3-211ENST00000556744 LAMC3Q9Y6N6 1575 aa17.58■□□□□ 0.41
MARK3-211ENST00000556744 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
MARK3-211ENST00000556744 RNF216Q9NWF9 866 aaPredicted RBP17.53■□□□□ 0.4
MARK3-211ENST00000556744 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
MARK3-211ENST00000556744 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
MARK3-211ENST00000556744 PDS5BQ9NTI5 1447 aa17.46■□□□□ 0.39
MARK3-211ENST00000556744 CUX2O14529 1486 aa17.45■□□□□ 0.38
MARK3-211ENST00000556744 DMRT2Q9Y5R5 561 aa17.44■□□□□ 0.38
MARK3-211ENST00000556744 CFTRP13569 1480 aa17.42■□□□□ 0.38
MARK3-211ENST00000556744 THOC2Q8NI27 1593 aaKnown RBP17.37■□□□□ 0.37
MARK3-211ENST00000556744 KIF21AQ7Z4S6 1674 aa17.37■□□□□ 0.37
MARK3-211ENST00000556744 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
MARK3-211ENST00000556744 HOXD11P31277 338 aaPredicted RBP17.3■□□□□ 0.36
MARK3-211ENST00000556744 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
MARK3-211ENST00000556744 MRC2Q9UBG0 1479 aa17.26■□□□□ 0.35
MARK3-211ENST00000556744 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
MARK3-211ENST00000556744 WDR62O43379 1518 aa17.24■□□□□ 0.35
MARK3-211ENST00000556744 PRDM2Q13029 1718 aa17.23■□□□□ 0.35
MARK3-211ENST00000556744 ZBTB22O15209 634 aa17.22■□□□□ 0.35
MARK3-211ENST00000556744 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
MARK3-211ENST00000556744 URB2Q14146 1524 aaKnown RBP17.13■□□□□ 0.33
MARK3-211ENST00000556744 SUPT5HO00267 1087 aaKnown RBP17.09■□□□□ 0.33
MARK3-211ENST00000556744 DNAJC5Q9H3Z4 198 aa17.05■□□□□ 0.32
MARK3-211ENST00000556744 ABCC8Q09428 1581 aa17.04■□□□□ 0.32
MARK3-211ENST00000556744 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
MARK3-211ENST00000556744 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
MARK3-211ENST00000556744 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
MARK3-211ENST00000556744 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
MARK3-211ENST00000556744 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
MARK3-211ENST00000556744 CUX1P39880 1505 aa16.85■□□□□ 0.29
MARK3-211ENST00000556744 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
MARK3-211ENST00000556744 ZNF608Q9ULD9 1512 aaPredicted RBP16.84■□□□□ 0.29
MARK3-211ENST00000556744 FGD5Q6ZNL6 1462 aa16.78■□□□□ 0.28
MARK3-211ENST00000556744 SOGA1O94964 1423 aa16.78■□□□□ 0.28
MARK3-211ENST00000556744 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
MARK3-211ENST00000556744 EIF4G3O43432 1585 aaKnown RBP16.75■□□□□ 0.27
MARK3-211ENST00000556744 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
MARK3-211ENST00000556744 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.276e-8■■■□□ 16.4
MARK3-211ENST00000556744 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
MARK3-211ENST00000556744 TOP2BQ02880 1626 aa16.69■□□□□ 0.26
MARK3-211ENST00000556744 BIVM-ERCC5R4GMW8 1640 aa16.69■□□□□ 0.26
MARK3-211ENST00000556744 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
MARK3-211ENST00000556744 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
MARK3-211ENST00000556744 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
MARK3-211ENST00000556744 ABCA10Q8WWZ4 1543 aa16.66■□□□□ 0.26
MARK3-211ENST00000556744 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
MARK3-211ENST00000556744 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
MARK3-211ENST00000556744 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
MARK3-211ENST00000556744 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
MARK3-211ENST00000556744 GAPVD1Q14C86 1478 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms