RNA–Protein interactions for RNA: ENST00000553835.5

PSMC1-203, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 3

Gene PSMC1, Length 390 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-203ENST00000553835 EFCAB5A4FU69 1503 aa16.33■□□□□ 0.2
PSMC1-203ENST00000553835 ATP10BO94823 1461 aa16.28■□□□□ 0.2
PSMC1-203ENST00000553835 SUPT5HO00267 1087 aaKnown RBP16.27■□□□□ 0.2
PSMC1-203ENST00000553835 TOM1O60784 492 aa16.27■□□□□ 0.2
PSMC1-203ENST00000553835 PIP4K2BP78356 416 aa16.25■□□□□ 0.19
PSMC1-203ENST00000553835 TRAPPC8Q9Y2L5 1435 aa16.25■□□□□ 0.19
PSMC1-203ENST00000553835 ALKQ9UM73 1620 aa16.23■□□□□ 0.19
PSMC1-203ENST00000553835 ATP10AO60312 1499 aa16.22■□□□□ 0.19
PSMC1-203ENST00000553835 POTEAQ6S8J7 498 aa16.22■□□□□ 0.19
PSMC1-203ENST00000553835 CAMSAP1Q5T5Y3 1602 aa16.22■□□□□ 0.19
PSMC1-203ENST00000553835 HECW1Q76N89 1606 aa16.21■□□□□ 0.19
PSMC1-203ENST00000553835 SCAF1Q9H7N4 1312 aaKnown RBP16.2■□□□□ 0.18
PSMC1-203ENST00000553835 C9orf84Q5VXU9 1444 aa16.2■□□□□ 0.18
PSMC1-203ENST00000553835 NCKAP5LQ9HCH0 1330 aa16.19■□□□□ 0.18
PSMC1-203ENST00000553835 C3P01024 1663 aa16.18■□□□□ 0.18
PSMC1-203ENST00000553835 TCOF1Q13428 1488 aaKnown RBP16.17■□□□□ 0.18
PSMC1-203ENST00000553835 PKD2Q13563 968 aa16.17■□□□□ 0.18
PSMC1-203ENST00000553835 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
PSMC1-203ENST00000553835 GOLGA3Q08378 1498 aa16.15■□□□□ 0.18
PSMC1-203ENST00000553835 CPS1P31327 1500 aa16.14■□□□□ 0.17
PSMC1-203ENST00000553835 CFAP74Q9C0B2 1584 aa16.13■□□□□ 0.17
PSMC1-203ENST00000553835 PTPRKQ15262 1439 aa16.13■□□□□ 0.17
PSMC1-203ENST00000553835 RAPGEF2Q9Y4G8 1499 aa16.12■□□□□ 0.17
PSMC1-203ENST00000553835 UPF1Q92900 1129 aaKnown RBP eCLIP16.12■□□□□ 0.17
PSMC1-203ENST00000553835 NPATQ14207 1427 aa16.1■□□□□ 0.17
PSMC1-203ENST00000553835 SETD1AO15047 1707 aaKnown RBP16.08■□□□□ 0.16
PSMC1-203ENST00000553835 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
PSMC1-203ENST00000553835 ARID3CA6NKF2 412 aa16.06■□□□□ 0.16
PSMC1-203ENST00000553835 REREQ9P2R6 1566 aa16.05■□□□□ 0.16
PSMC1-203ENST00000553835 AGLP35573 1532 aa16.05■□□□□ 0.16
PSMC1-203ENST00000553835 SHANK2Q9UPX8 1470 aa16.04■□□□□ 0.16
PSMC1-203ENST00000553835 SCAPERQ9BY12 1400 aa16.03■□□□□ 0.16
PSMC1-203ENST00000553835 CNTLNQ9NXG0 1405 aa16.01■□□□□ 0.15
PSMC1-203ENST00000553835 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16■□□□□ 0.15
PSMC1-203ENST00000553835 ZNF142P52746 1687 aaPredicted RBP16■□□□□ 0.15
PSMC1-203ENST00000553835 VWDEQ8N2E2 1590 aa15.94■□□□□ 0.14
PSMC1-203ENST00000553835 KDM5CP41229 1560 aa15.93■□□□□ 0.14
PSMC1-203ENST00000553835 DIP2CQ9Y2E4 1556 aa15.93■□□□□ 0.14
PSMC1-203ENST00000553835 CEP170BQ9Y4F5 1589 aaPredicted RBP15.93■□□□□ 0.14
PSMC1-203ENST00000553835 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
PSMC1-203ENST00000553835 PLCH2O75038 1416 aa15.92■□□□□ 0.14
PSMC1-203ENST00000553835 MROH2AA6NES4 1674 aa15.92■□□□□ 0.14
PSMC1-203ENST00000553835 NEURL4Q96JN8 1562 aa15.91■□□□□ 0.14
PSMC1-203ENST00000553835 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
PSMC1-203ENST00000553835 MYO3AQ8NEV4 1616 aa15.9■□□□□ 0.14
PSMC1-203ENST00000553835 ZMYM3Q14202 1370 aa15.9■□□□□ 0.14
PSMC1-203ENST00000553835 ESF1Q9H501 851 aaKnown RBP15.9■□□□□ 0.14
PSMC1-203ENST00000553835 ZNF518AQ6AHZ1 1483 aa15.9■□□□□ 0.14
PSMC1-203ENST00000553835 RAPGEF6Q8TEU7 1601 aa15.89■□□□□ 0.13
PSMC1-203ENST00000553835 FAM9AQ8IZU1 332 aaPredicted RBP15.88■□□□□ 0.13
PSMC1-203ENST00000553835 PLEKHD1A6NEE1 506 aa15.87■□□□□ 0.13
PSMC1-203ENST00000553835 SENP3Q9H4L4 574 aaPredicted RBP15.87■□□□□ 0.13
PSMC1-203ENST00000553835 RNF17Q9BXT8 1623 aaKnown RBP15.86■□□□□ 0.13
PSMC1-203ENST00000553835 LRRC7Q96NW7 1537 aa15.85■□□□□ 0.13
PSMC1-203ENST00000553835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.85■□□□□ 0.13
PSMC1-203ENST00000553835 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
PSMC1-203ENST00000553835 MLH3Q9UHC1 1453 aa15.84■□□□□ 0.13
PSMC1-203ENST00000553835 ABCA6Q8N139 1617 aa15.83■□□□□ 0.13
PSMC1-203ENST00000553835 SUPT6HQ7KZ85 1726 aaKnown RBP15.83■□□□□ 0.13
PSMC1-203ENST00000553835 AFAP1Q8N556 730 aa15.83■□□□□ 0.12
PSMC1-203ENST00000553835 FAM135BQ49AJ0 1406 aa15.82■□□□□ 0.12
PSMC1-203ENST00000553835 DNMT1P26358 1616 aaKnown RBP15.81■□□□□ 0.12
PSMC1-203ENST00000553835 A2ML1A8K2U0 1454 aa15.8■□□□□ 0.12
PSMC1-203ENST00000553835 POLR1AO95602 1720 aaPredicted RBP15.8■□□□□ 0.12
PSMC1-203ENST00000553835 EFCAB2Q5VUJ9 269 aa15.79■□□□□ 0.12
PSMC1-203ENST00000553835 MED14O60244 1454 aa15.78■□□□□ 0.12
PSMC1-203ENST00000553835 IFFO2Q5TF58 517 aa15.77■□□□□ 0.12
PSMC1-203ENST00000553835 SYNMO15061 1565 aa15.76■□□□□ 0.11
PSMC1-203ENST00000553835 P3H3Q8IVL6 736 aa15.76■□□□□ 0.11
PSMC1-203ENST00000553835 STRCP1A6NGW2 1772 aa15.76■□□□□ 0.11
PSMC1-203ENST00000553835 CDK12Q9NYV4 1490 aaPredicted RBP15.76■□□□□ 0.11
PSMC1-203ENST00000553835 SAMD9Q5K651 1589 aa15.74■□□□□ 0.11
PSMC1-203ENST00000553835 TRIM52Q96A61 297 aa15.71■□□□□ 0.11
PSMC1-203ENST00000553835 DEPDC5O75140 1603 aa15.7■□□□□ 0.1
PSMC1-203ENST00000553835 SETBP1Q9Y6X0 1596 aa15.7■□□□□ 0.1
PSMC1-203ENST00000553835 NPHP4O75161 1426 aaPredicted RBP15.69■□□□□ 0.1
PSMC1-203ENST00000553835 ZNF772Q68DY9 489 aaPredicted RBP15.69■□□□□ 0.1
PSMC1-203ENST00000553835 ANKLE2Q86XL3 938 aa15.69■□□□□ 0.1
PSMC1-203ENST00000553835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.67■□□□□ 0.1
PSMC1-203ENST00000553835 ZRANB1Q9UGI0 708 aa15.66■□□□□ 0.1
PSMC1-203ENST00000553835 CDK13Q14004 1512 aaKnown RBP15.66■□□□□ 0.1
PSMC1-203ENST00000553835 CLTCQ00610 1675 aaKnown RBP15.66■□□□□ 0.1
PSMC1-203ENST00000553835 KIDINS220Q9ULH0 1771 aa15.65■□□□□ 0.1
PSMC1-203ENST00000553835 MYO5CQ9NQX4 1742 aa15.65■□□□□ 0.1
PSMC1-203ENST00000553835 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
PSMC1-203ENST00000553835 RXRBP28702 533 aa15.64■□□□□ 0.09
PSMC1-203ENST00000553835 MYT1LQ9UL68 1186 aa15.63■□□□□ 0.09
PSMC1-203ENST00000553835 JCADQ9P266 1359 aa15.62■□□□□ 0.09
PSMC1-203ENST00000553835 XIRP1Q702N8 1843 aaKnown RBP15.61■□□□□ 0.09
PSMC1-203ENST00000553835 ABCC1P33527 1531 aa15.61■□□□□ 0.09
PSMC1-203ENST00000553835 LRP6O75581 1613 aa15.61■□□□□ 0.09
PSMC1-203ENST00000553835 IQGAP1P46940 1657 aa15.6■□□□□ 0.09
PSMC1-203ENST00000553835 FOXD1Q16676 465 aa15.6■□□□□ 0.09
PSMC1-203ENST00000553835 RBM33Q96EV2 1170 aaKnown RBP15.6■□□□□ 0.09
PSMC1-203ENST00000553835 ROBO1Q9Y6N7 1651 aa15.59■□□□□ 0.09
PSMC1-203ENST00000553835 THEMISQ8N1K5 641 aaPredicted RBP15.58■□□□□ 0.08
PSMC1-203ENST00000553835 KDM5DQ9BY66 1539 aa15.57■□□□□ 0.08
PSMC1-203ENST00000553835 ARHGAP5Q13017 1502 aa15.56■□□□□ 0.08
PSMC1-203ENST00000553835 PLXNC1O60486 1568 aa15.56■□□□□ 0.08
PSMC1-203ENST00000553835 SPATA31A6Q5VVP1 1343 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms