RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 ARID3CA6NKF2 412 aa13.43□□□□□ -0.26
RDH11-205ENST00000553816 ATP10BO94823 1461 aa13.42□□□□□ -0.26
RDH11-205ENST00000553816 NUP153P49790 1475 aaKnown RBP13.42□□□□□ -0.26
RDH11-205ENST00000553816 PPRC1Q5VV67 1664 aaKnown RBP13.41□□□□□ -0.26
RDH11-205ENST00000553816 GLI2P10070 1586 aa13.41□□□□□ -0.26
RDH11-205ENST00000553816 EPRSP07814 1512 aaKnown RBP13.4□□□□□ -0.26
RDH11-205ENST00000553816 LRRIQ1Q96JM4 1722 aa13.4□□□□□ -0.26
RDH11-205ENST00000553816 WDR7Q9Y4E6 1490 aa13.39□□□□□ -0.27
RDH11-205ENST00000553816 MAP3K4Q9Y6R4 1608 aa13.39□□□□□ -0.27
RDH11-205ENST00000553816 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
RDH11-205ENST00000553816 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
RDH11-205ENST00000553816 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
RDH11-205ENST00000553816 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
RDH11-205ENST00000553816 CDK13Q14004 1512 aaKnown RBP13.34□□□□□ -0.27
RDH11-205ENST00000553816 KCNH8Q96L42 1107 aa13.34□□□□□ -0.27
RDH11-205ENST00000553816 CFAP43Q8NDM7 1665 aa13.34□□□□□ -0.27
RDH11-205ENST00000553816 CLIP1P30622 1438 aa13.33□□□□□ -0.28
RDH11-205ENST00000553816 FMN1Q68DA7 1419 aa13.33□□□□□ -0.28
RDH11-205ENST00000553816 PCF11O94913 1555 aaKnown RBP13.32□□□□□ -0.28
RDH11-205ENST00000553816 HECW1Q76N89 1606 aa13.32□□□□□ -0.28
RDH11-205ENST00000553816 PRKAR2AP13861 404 aaKnown RBP13.32□□□□□ -0.28
RDH11-205ENST00000553816 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
RDH11-205ENST00000553816 ABCA9Q8IUA7 1624 aa13.29□□□□□ -0.28
RDH11-205ENST00000553816 ATP1B4Q9UN42 357 aaPredicted RBP13.29□□□□□ -0.28
RDH11-205ENST00000553816 CLEC11AQ9Y240 323 aa13.29□□□□□ -0.28
RDH11-205ENST00000553816 KDM6BO15054 1643 aa13.28□□□□□ -0.28
RDH11-205ENST00000553816 CEP162Q5TB80 1403 aa13.28□□□□□ -0.28
RDH11-205ENST00000553816 MKRN4PQ13434 485 aaPredicted RBP13.27□□□□□ -0.29
RDH11-205ENST00000553816 CD109Q6YHK3 1445 aa13.26□□□□□ -0.29
RDH11-205ENST00000553816 CASKIN1Q8WXD9 1431 aa13.26□□□□□ -0.29
RDH11-205ENST00000553816 COL17A1Q9UMD9 1497 aaPredicted RBP13.25□□□□□ -0.29
RDH11-205ENST00000553816 TTC37Q6PGP7 1564 aa13.24□□□□□ -0.29
RDH11-205ENST00000553816 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.24□□□□□ -0.29
RDH11-205ENST00000553816 MAGI3Q5TCQ9 1506 aa13.23□□□□□ -0.29
RDH11-205ENST00000553816 PLEKHD1A6NEE1 506 aa13.23□□□□□ -0.29
RDH11-205ENST00000553816 SPDYE1Q8NFV5 336 aaPredicted RBP13.23□□□□□ -0.29
RDH11-205ENST00000553816 KIF14Q15058 1648 aa13.23□□□□□ -0.29
RDH11-205ENST00000553816 TEX14Q8IWB6 1497 aa13.23□□□□□ -0.29
RDH11-205ENST00000553816 FYCO1Q9BQS8 1478 aa13.22□□□□□ -0.29
RDH11-205ENST00000553816 C19orf67A6NJJ6 358 aa13.21□□□□□ -0.29
RDH11-205ENST00000553816 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
RDH11-205ENST00000553816 SSUH2Q9Y2M2 353 aa13.18□□□□□ -0.3
RDH11-205ENST00000553816 MYO5CQ9NQX4 1742 aa13.17□□□□□ -0.3
RDH11-205ENST00000553816 TROQ12816 1431 aaPredicted RBP13.17□□□□□ -0.3
RDH11-205ENST00000553816 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
RDH11-205ENST00000553816 CDC42BPBQ9Y5S2 1711 aa13.15□□□□□ -0.3
RDH11-205ENST00000553816 GABBR2O75899 941 aa13.14□□□□□ -0.31
RDH11-205ENST00000553816 CHADLQ6NUI6 762 aa13.14□□□□□ -0.31
RDH11-205ENST00000553816 ARAP3Q8WWN8 1544 aa13.13□□□□□ -0.31
RDH11-205ENST00000553816 CDC42BPAQ5VT25 1732 aa13.13□□□□□ -0.31
RDH11-205ENST00000553816 NEO1Q92859 1461 aa13.13□□□□□ -0.31
RDH11-205ENST00000553816 CDK11AQ9UQ88 783 aaPredicted RBP13.13□□□□□ -0.31
RDH11-205ENST00000553816 FRMPD1Q5SYB0 1578 aa13.12□□□□□ -0.31
RDH11-205ENST00000553816 CFAP74Q9C0B2 1584 aa13.11□□□□□ -0.31
RDH11-205ENST00000553816 FANCAO15360 1455 aa13.11□□□□□ -0.31
RDH11-205ENST00000553816 RICTORQ6R327 1708 aa13.11□□□□□ -0.31
RDH11-205ENST00000553816 PLCH2O75038 1416 aa13.11□□□□□ -0.31
RDH11-205ENST00000553816 VPS8Q8N3P4 1428 aa13.11□□□□□ -0.31
RDH11-205ENST00000553816 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
RDH11-205ENST00000553816 AKNAQ7Z591 1439 aa13.1□□□□□ -0.31
RDH11-205ENST00000553816 TIAM1Q13009 1591 aa13.08□□□□□ -0.32
RDH11-205ENST00000553816 RAPGEF3O95398 923 aa13.08□□□□□ -0.32
RDH11-205ENST00000553816 PHLDB1Q86UU1 1377 aa13.07□□□□□ -0.32
RDH11-205ENST00000553816 ARHGAP5Q13017 1502 aa13.06□□□□□ -0.32
RDH11-205ENST00000553816 EHBP1L1Q8N3D4 1523 aa13.06□□□□□ -0.32
RDH11-205ENST00000553816 MTUS2Q5JR59 1369 aa13.05□□□□□ -0.32
RDH11-205ENST00000553816 ADGRL1O94910 1474 aa13.04□□□□□ -0.32
RDH11-205ENST00000553816 DENND4BO75064 1496 aaPredicted RBP13.04□□□□□ -0.32
RDH11-205ENST00000553816 GPATCH8Q9UKJ3 1502 aaKnown RBP13.03□□□□□ -0.32
RDH11-205ENST00000553816 ITSN2Q9NZM3 1697 aa13.03□□□□□ -0.32
RDH11-205ENST00000553816 LHX8Q68G74 356 aa13.03□□□□□ -0.32
RDH11-205ENST00000553816 SCAPERQ9BY12 1400 aa13.03□□□□□ -0.32
RDH11-205ENST00000553816 SAMD9LQ8IVG5 1584 aa13.03□□□□□ -0.32
RDH11-205ENST00000553816 SUPT6HQ7KZ85 1726 aaKnown RBP13.02□□□□□ -0.32
RDH11-205ENST00000553816 EFCAB2Q5VUJ9 269 aa13.02□□□□□ -0.33
RDH11-205ENST00000553816 ARHGEF12Q9NZN5 1544 aa13.02□□□□□ -0.33
RDH11-205ENST00000553816 ABCC1P33527 1531 aa13.01□□□□□ -0.33
RDH11-205ENST00000553816 SIGLEC1Q9BZZ2 1709 aa13.01□□□□□ -0.33
RDH11-205ENST00000553816 ZMYM4Q5VZL5 1548 aa13□□□□□ -0.33
RDH11-205ENST00000553816 LRRC9Q6ZRR7 1453 aa13□□□□□ -0.33
RDH11-205ENST00000553816 KANK4Q5T7N3 995 aaPredicted RBP13□□□□□ -0.33
RDH11-205ENST00000553816 MAP3K1Q13233 1512 aa12.99□□□□□ -0.33
RDH11-205ENST00000553816 POGZQ7Z3K3 1410 aa12.99□□□□□ -0.33
RDH11-205ENST00000553816 KDM4FA0A1W2PPD8 638 aa12.99□□□□□ -0.33
RDH11-205ENST00000553816 ARHGEF40Q8TER5 1519 aa12.98□□□□□ -0.33
RDH11-205ENST00000553816 NCOA2Q15596 1464 aa12.98□□□□□ -0.33
RDH11-205ENST00000553816 YEATS2Q9ULM3 1422 aa12.97□□□□□ -0.33
RDH11-205ENST00000553816 CCNB3Q8WWL7 1395 aa12.97□□□□□ -0.33
RDH11-205ENST00000553816 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
RDH11-205ENST00000553816 KDM5CP41229 1560 aa12.97□□□□□ -0.33
RDH11-205ENST00000553816 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.33
RDH11-205ENST00000553816 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
RDH11-205ENST00000553816 SYCP2Q9BX26 1530 aa12.96□□□□□ -0.33
RDH11-205ENST00000553816 ZFYVE16Q7Z3T8 1539 aa12.95□□□□□ -0.34
RDH11-205ENST00000553816 AFAP1Q8N556 730 aa12.95□□□□□ -0.34
RDH11-205ENST00000553816 HECW2Q9P2P5 1572 aa12.94□□□□□ -0.34
RDH11-205ENST00000553816 KIDINS220Q9ULH0 1771 aa12.94□□□□□ -0.34
RDH11-205ENST00000553816 ZNF518AQ6AHZ1 1483 aa12.94□□□□□ -0.34
RDH11-205ENST00000553816 CFDP1Q9UEE9 299 aaPredicted RBP12.94□□□□□ -0.34
RDH11-205ENST00000553816 ZNF644Q9H582 1327 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms