RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 CCDC146Q8IYE0 955 aa14.37□□□□□ -0.11
TGFBR1-209ENST00000552516 POLA1P09884 1462 aaPredicted RBP14.37□□□□□ -0.11
TGFBR1-209ENST00000552516 AFAP1Q8N556 730 aa14.36□□□□□ -0.11
TGFBR1-209ENST00000552516 CARMIL2Q6F5E8 1435 aa14.36□□□□□ -0.11
TGFBR1-209ENST00000552516 RGS3P49796 1198 aa14.35□□□□□ -0.11
TGFBR1-209ENST00000552516 POGKQ9P215 609 aa14.35□□□□□ -0.11
TGFBR1-209ENST00000552516 TRAK1Q9UPV9 953 aa14.35□□□□□ -0.11
TGFBR1-209ENST00000552516 ROCK2O75116 1388 aaKnown RBP14.34□□□□□ -0.11
TGFBR1-209ENST00000552516 PRXQ9BXM0 1461 aa14.34□□□□□ -0.11
TGFBR1-209ENST00000552516 ANP32AP39687 249 aaKnown RBP14.34□□□□□ -0.11
TGFBR1-209ENST00000552516 CCDC18Q5T9S5 1454 aa14.34□□□□□ -0.11
TGFBR1-209ENST00000552516 LRRC9Q6ZRR7 1453 aa14.33□□□□□ -0.11
TGFBR1-209ENST00000552516 CCDC184Q52MB2 194 aa14.33□□□□□ -0.11
TGFBR1-209ENST00000552516 SRPK2P78362 688 aaKnown RBP14.33□□□□□ -0.12
TGFBR1-209ENST00000552516 EFCAB2Q5VUJ9 269 aa14.32□□□□□ -0.12
TGFBR1-209ENST00000552516 PTPRGP23470 1445 aa14.32□□□□□ -0.12
TGFBR1-209ENST00000552516 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
TGFBR1-209ENST00000552516 FGD6Q6ZV73 1430 aa14.31□□□□□ -0.12
TGFBR1-209ENST00000552516 PRDM2Q13029 1718 aa14.3□□□□□ -0.12
TGFBR1-209ENST00000552516 PLIN1O60240 522 aa14.3□□□□□ -0.12
TGFBR1-209ENST00000552516 RRP7AQ9Y3A4 280 aaKnown RBP14.29□□□□□ -0.12
TGFBR1-209ENST00000552516 PRG4Q92954 1404 aaPredicted RBP14.29□□□□□ -0.12
TGFBR1-209ENST00000552516 SPAG9O60271 1321 aaKnown RBP14.29□□□□□ -0.12
TGFBR1-209ENST00000552516 ANKRD30AQ9BXX3 1397 aa14.29□□□□□ -0.12
TGFBR1-209ENST00000552516 NBPF8Q3BBV2 869 aa14.29□□□□□ -0.12
TGFBR1-209ENST00000552516 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
TGFBR1-209ENST00000552516 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
TGFBR1-209ENST00000552516 TMF1P82094 1093 aa14.27□□□□□ -0.12
TGFBR1-209ENST00000552516 NCOA2Q15596 1464 aa14.26□□□□□ -0.13
TGFBR1-209ENST00000552516 NBPF1Q3BBV0 1214 aa14.26□□□□□ -0.13
TGFBR1-209ENST00000552516 CDK13Q14004 1512 aaKnown RBP14.25□□□□□ -0.13
TGFBR1-209ENST00000552516 PANK3Q9H999 370 aa14.24□□□□□ -0.13
TGFBR1-209ENST00000552516 TMEM132EQ6IEE7 984 aa14.24□□□□□ -0.13
TGFBR1-209ENST00000552516 WASHC2AQ641Q2 1341 aa14.24□□□□□ -0.13
TGFBR1-209ENST00000552516 WASHC2CQ9Y4E1 1318 aa14.23□□□□□ -0.13
TGFBR1-209ENST00000552516 BCL2L13Q9BXK5 485 aa14.22□□□□□ -0.13
TGFBR1-209ENST00000552516 ZNF608Q9ULD9 1512 aaPredicted RBP14.22□□□□□ -0.13
TGFBR1-209ENST00000552516 TPRNQ4KMQ1 711 aa14.22□□□□□ -0.13
TGFBR1-209ENST00000552516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.21□□□□□ -0.13
TGFBR1-209ENST00000552516 CLUAP1Q96AJ1 413 aa14.21□□□□□ -0.13
TGFBR1-209ENST00000552516 PRKRIP1Q9H875 184 aaPredicted RBP14.21□□□□□ -0.13
TGFBR1-209ENST00000552516 MYOM3Q5VTT5 1437 aa14.21□□□□□ -0.13
TGFBR1-209ENST00000552516 C11orf95C9JLR9 678 aaPredicted RBP14.21□□□□□ -0.14
TGFBR1-209ENST00000552516 MORC1Q86VD1 984 aa14.2□□□□□ -0.14
TGFBR1-209ENST00000552516 TSHZ2Q9NRE2 1034 aa14.19□□□□□ -0.14
TGFBR1-209ENST00000552516 RBM19Q9Y4C8 960 aaKnown RBP14.19□□□□□ -0.14
TGFBR1-209ENST00000552516 KIF7Q2M1P5 1343 aa14.18□□□□□ -0.14
TGFBR1-209ENST00000552516 TIMELESSQ9UNS1 1208 aa14.18□□□□□ -0.14
TGFBR1-209ENST00000552516 CCER2I3L3R5 266 aa14.17□□□□□ -0.14
TGFBR1-209ENST00000552516 USP47Q96K76 1375 aa14.17□□□□□ -0.14
TGFBR1-209ENST00000552516 SNAPC4Q5SXM2 1469 aa14.17□□□□□ -0.14
TGFBR1-209ENST00000552516 APBB1O00213 710 aa14.17□□□□□ -0.14
TGFBR1-209ENST00000552516 SPRYD3Q8NCJ5 442 aa14.16□□□□□ -0.14
TGFBR1-209ENST00000552516 U2AF1L5P0DN76 240 aaPredicted RBP14.16□□□□□ -0.14
TGFBR1-209ENST00000552516 U2AF1Q01081 240 aaKnown RBP eCLIP14.16□□□□□ -0.14
TGFBR1-209ENST00000552516 CASKIN1Q8WXD9 1431 aa14.16□□□□□ -0.14
TGFBR1-209ENST00000552516 KIF15Q9NS87 1388 aa14.15□□□□□ -0.14
TGFBR1-209ENST00000552516 PPP4R2Q9NY27 417 aa14.15□□□□□ -0.14
TGFBR1-209ENST00000552516 ELL2O00472 640 aaPredicted RBP14.15□□□□□ -0.14
TGFBR1-209ENST00000552516 TCERG1O14776 1098 aaKnown RBP14.15□□□□□ -0.14
TGFBR1-209ENST00000552516 RAPGEF3O95398 923 aa14.15□□□□□ -0.14
TGFBR1-209ENST00000552516 MINK1Q8N4C8 1332 aaPredicted RBP14.14□□□□□ -0.15
TGFBR1-209ENST00000552516 PLB1Q6P1J6 1458 aa14.14□□□□□ -0.15
TGFBR1-209ENST00000552516 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.14□□□□□ -0.15
TGFBR1-209ENST00000552516 WDR97A6NE52 1622 aa14.14□□□□□ -0.15
TGFBR1-209ENST00000552516 RRBP1Q9P2E9 1410 aaKnown RBP14.13□□□□□ -0.15
TGFBR1-209ENST00000552516 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
TGFBR1-209ENST00000552516 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
TGFBR1-209ENST00000552516 KANK1Q14678 1352 aa14.13□□□□□ -0.15
TGFBR1-209ENST00000552516 HSP90AA1P07900 732 aaKnown RBP14.12□□□□□ -0.15
TGFBR1-209ENST00000552516 CFAP70Q5T0N1 1121 aa14.12□□□□□ -0.15
TGFBR1-209ENST00000552516 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
TGFBR1-209ENST00000552516 CCDC144AA2RUR9 1427 aa14.12□□□□□ -0.15
TGFBR1-209ENST00000552516 GRIN2BQ13224 1484 aa14.11□□□□□ -0.15
TGFBR1-209ENST00000552516 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
TGFBR1-209ENST00000552516 CDCA7LQ96GN5 454 aa14.11□□□□□ -0.15
TGFBR1-209ENST00000552516 KTN1Q86UP2 1357 aaKnown RBP14.11□□□□□ -0.15
TGFBR1-209ENST00000552516 FTSJ3Q8IY81 847 aaKnown RBP14.1□□□□□ -0.15
TGFBR1-209ENST00000552516 CFAP53Q96M91 514 aa14.1□□□□□ -0.15
TGFBR1-209ENST00000552516 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
TGFBR1-209ENST00000552516 FAM69CQ0P6D2 419 aa14.1□□□□□ -0.15
TGFBR1-209ENST00000552516 LTV1Q96GA3 475 aaPredicted RBP14.1□□□□□ -0.15
TGFBR1-209ENST00000552516 RCAN3Q9UKA8 241 aa14.1□□□□□ -0.15
TGFBR1-209ENST00000552516 MAPK8IP3Q9UPT6 1336 aa14.1□□□□□ -0.15
TGFBR1-209ENST00000552516 PCF11O94913 1555 aaKnown RBP14.09□□□□□ -0.15
TGFBR1-209ENST00000552516 CDCA8Q53HL2 280 aa14.09□□□□□ -0.15
TGFBR1-209ENST00000552516 TAOK2Q9UL54 1235 aa14.09□□□□□ -0.15
TGFBR1-209ENST00000552516 ANKRD50Q9ULJ7 1429 aa14.09□□□□□ -0.15
TGFBR1-209ENST00000552516 UACAQ9BZF9 1416 aa14.08□□□□□ -0.16
TGFBR1-209ENST00000552516 SKAP1Q86WV1 359 aa14.08□□□□□ -0.16
TGFBR1-209ENST00000552516 TIAM1Q13009 1591 aa14.07□□□□□ -0.16
TGFBR1-209ENST00000552516 EXOC6Q8TAG9 804 aa14.07□□□□□ -0.16
TGFBR1-209ENST00000552516 RTN4Q9NQC3 1192 aaKnown RBP14.06□□□□□ -0.16
TGFBR1-209ENST00000552516 APAF1O14727 1248 aa14.06□□□□□ -0.16
TGFBR1-209ENST00000552516 SLC4A3P48751 1232 aa14.05□□□□□ -0.16
TGFBR1-209ENST00000552516 ZNF428Q96B54 188 aa14.05□□□□□ -0.16
TGFBR1-209ENST00000552516 PTPRKQ15262 1439 aa14.05□□□□□ -0.16
TGFBR1-209ENST00000552516 MRC2Q9UBG0 1479 aa14.04□□□□□ -0.16
TGFBR1-209ENST00000552516 CABP2Q9NPB3 220 aa14.04□□□□□ -0.16
TGFBR1-209ENST00000552516 CCDC7Q96M83 1385 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms