RNA–Protein interactions for RNA: ENST00000550770.1

PRIM1-206, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-206ENST00000550770 ATP10BO94823 1461 aa18.36■□□□□ 0.53
PRIM1-206ENST00000550770 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
PRIM1-206ENST00000550770 NUP153P49790 1475 aaKnown RBP18.34■□□□□ 0.53
PRIM1-206ENST00000550770 ARID3CA6NKF2 412 aa18.33■□□□□ 0.52
PRIM1-206ENST00000550770 KDM6BO15054 1643 aa18.33■□□□□ 0.52
PRIM1-206ENST00000550770 ARHGAP35Q9NRY4 1499 aa18.32■□□□□ 0.52
PRIM1-206ENST00000550770 CFAP43Q8NDM7 1665 aa18.28■□□□□ 0.52
PRIM1-206ENST00000550770 KCNH8Q96L42 1107 aa18.27■□□□□ 0.52
PRIM1-206ENST00000550770 TEX14Q8IWB6 1497 aa18.26■□□□□ 0.51
PRIM1-206ENST00000550770 CD109Q6YHK3 1445 aa18.24■□□□□ 0.51
PRIM1-206ENST00000550770 MAGI3Q5TCQ9 1506 aa18.24■□□□□ 0.51
PRIM1-206ENST00000550770 REM2Q8IYK8 340 aaPredicted RBP18.24■□□□□ 0.51
PRIM1-206ENST00000550770 SSUH2Q9Y2M2 353 aa18.24■□□□□ 0.51
PRIM1-206ENST00000550770 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
PRIM1-206ENST00000550770 COL17A1Q9UMD9 1497 aaPredicted RBP18.22■□□□□ 0.51
PRIM1-206ENST00000550770 ABCA9Q8IUA7 1624 aa18.22■□□□□ 0.51
PRIM1-206ENST00000550770 CDK13Q14004 1512 aaKnown RBP18.19■□□□□ 0.5
PRIM1-206ENST00000550770 HECW1Q76N89 1606 aa18.19■□□□□ 0.5
PRIM1-206ENST00000550770 PLEKHD1A6NEE1 506 aa18.13■□□□□ 0.49
PRIM1-206ENST00000550770 SPDYE4A6NLX3 237 aa18.13■□□□□ 0.49
PRIM1-206ENST00000550770 CLIP1P30622 1438 aa18.13■□□□□ 0.49
PRIM1-206ENST00000550770 PCF11O94913 1555 aaKnown RBP18.12■□□□□ 0.49
PRIM1-206ENST00000550770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.11■□□□□ 0.49
PRIM1-206ENST00000550770 LRRIQ1Q96JM4 1722 aa18.1■□□□□ 0.49
PRIM1-206ENST00000550770 TTC37Q6PGP7 1564 aa18.09■□□□□ 0.49
PRIM1-206ENST00000550770 CASKIN1Q8WXD9 1431 aa18.09■□□□□ 0.49
PRIM1-206ENST00000550770 CHRDL2Q6WN34 429 aa18.09■□□□□ 0.49
PRIM1-206ENST00000550770 ATP1B4Q9UN42 357 aaPredicted RBP18.09■□□□□ 0.49
PRIM1-206ENST00000550770 ARAP3Q8WWN8 1544 aa18.08■□□□□ 0.49
PRIM1-206ENST00000550770 NEO1Q92859 1461 aa18.07■□□□□ 0.48
PRIM1-206ENST00000550770 PHLDB1Q86UU1 1377 aa18.05■□□□□ 0.48
PRIM1-206ENST00000550770 FYCO1Q9BQS8 1478 aa18.04■□□□□ 0.48
PRIM1-206ENST00000550770 CCDC18Q5T9S5 1454 aa18.03■□□□□ 0.48
PRIM1-206ENST00000550770 SPDYE1Q8NFV5 336 aaPredicted RBP18.03■□□□□ 0.48
PRIM1-206ENST00000550770 KIF14Q15058 1648 aa18.02■□□□□ 0.48
PRIM1-206ENST00000550770 PITPNM1O00562 1244 aa18.02■□□□□ 0.48
PRIM1-206ENST00000550770 TROQ12816 1431 aaPredicted RBP18.02■□□□□ 0.48
PRIM1-206ENST00000550770 CEP162Q5TB80 1403 aa18.02■□□□□ 0.48
PRIM1-206ENST00000550770 CDK11AQ9UQ88 783 aaPredicted RBP18.01■□□□□ 0.47
PRIM1-206ENST00000550770 FANCAO15360 1455 aa18■□□□□ 0.47
PRIM1-206ENST00000550770 FRMPD1Q5SYB0 1578 aa18■□□□□ 0.47
PRIM1-206ENST00000550770 CFAP74Q9C0B2 1584 aa18■□□□□ 0.47
PRIM1-206ENST00000550770 KDM4FA0A1W2PPD8 638 aa17.98■□□□□ 0.47
PRIM1-206ENST00000550770 PLCH2O75038 1416 aa17.98■□□□□ 0.47
PRIM1-206ENST00000550770 AKNAQ7Z591 1439 aa17.98■□□□□ 0.47
PRIM1-206ENST00000550770 MYO5CQ9NQX4 1742 aa17.95■□□□□ 0.46
PRIM1-206ENST00000550770 RAPGEF3O95398 923 aa17.95■□□□□ 0.46
PRIM1-206ENST00000550770 CLEC11AQ9Y240 323 aa17.95■□□□□ 0.46
PRIM1-206ENST00000550770 ADGRL1O94910 1474 aa17.95■□□□□ 0.46
PRIM1-206ENST00000550770 RICTORQ6R327 1708 aa17.93■□□□□ 0.46
PRIM1-206ENST00000550770 LOC105371045A0A1W2PR82 267 aa17.93■□□□□ 0.46
PRIM1-206ENST00000550770 DENND4BO75064 1496 aaPredicted RBP17.93■□□□□ 0.46
PRIM1-206ENST00000550770 POTEHQ6S545 545 aa17.9■□□□□ 0.46
PRIM1-206ENST00000550770 ARHGAP5Q13017 1502 aa17.88■□□□□ 0.45
PRIM1-206ENST00000550770 ZMYM4Q5VZL5 1548 aa17.88■□□□□ 0.45
PRIM1-206ENST00000550770 PREX2Q70Z35 1606 aa17.88■□□□□ 0.45
PRIM1-206ENST00000550770 ARHGEF40Q8TER5 1519 aa17.88■□□□□ 0.45
PRIM1-206ENST00000550770 POGZQ7Z3K3 1410 aa17.87■□□□□ 0.45
PRIM1-206ENST00000550770 SCAPERQ9BY12 1400 aa17.87■□□□□ 0.45
PRIM1-206ENST00000550770 CDC42BPBQ9Y5S2 1711 aa17.86■□□□□ 0.45
PRIM1-206ENST00000550770 EFCAB2Q5VUJ9 269 aa17.86■□□□□ 0.45
PRIM1-206ENST00000550770 CDC42BPAQ5VT25 1732 aa17.83■□□□□ 0.44
PRIM1-206ENST00000550770 ZFYVE16Q7Z3T8 1539 aa17.82■□□□□ 0.44
PRIM1-206ENST00000550770 VPS8Q8N3P4 1428 aa17.81■□□□□ 0.44
PRIM1-206ENST00000550770 FKBP8Q14318 412 aa17.81■□□□□ 0.44
PRIM1-206ENST00000550770 MAGI2Q86UL8 1455 aa17.81■□□□□ 0.44
PRIM1-206ENST00000550770 YEATS2Q9ULM3 1422 aa17.81■□□□□ 0.44
PRIM1-206ENST00000550770 MTUS2Q5JR59 1369 aa17.8■□□□□ 0.44
PRIM1-206ENST00000550770 ABCC1P33527 1531 aa17.8■□□□□ 0.44
PRIM1-206ENST00000550770 EHBP1L1Q8N3D4 1523 aa17.8■□□□□ 0.44
PRIM1-206ENST00000550770 KDM5CP41229 1560 aa17.79■□□□□ 0.44
PRIM1-206ENST00000550770 GPATCH8Q9UKJ3 1502 aaKnown RBP17.79■□□□□ 0.44
PRIM1-206ENST00000550770 ZNF518AQ6AHZ1 1483 aa17.79■□□□□ 0.44
PRIM1-206ENST00000550770 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
PRIM1-206ENST00000550770 ARHGEF12Q9NZN5 1544 aa17.77■□□□□ 0.44
PRIM1-206ENST00000550770 SIGLEC1Q9BZZ2 1709 aa17.76■□□□□ 0.43
PRIM1-206ENST00000550770 TIAM1Q13009 1591 aa17.76■□□□□ 0.43
PRIM1-206ENST00000550770 PIP4P2Q8N4L2 257 aa17.76■□□□□ 0.43
PRIM1-206ENST00000550770 ITSN2Q9NZM3 1697 aa17.76■□□□□ 0.43
PRIM1-206ENST00000550770 SAMD9LQ8IVG5 1584 aa17.75■□□□□ 0.43
PRIM1-206ENST00000550770 ADAMTSL3P82987 1691 aa17.75■□□□□ 0.43
PRIM1-206ENST00000550770 PRR29P0C7W0 189 aa17.75■□□□□ 0.43
PRIM1-206ENST00000550770 FXR2P51116 673 aaKnown RBP eCLIP17.75■□□□□ 0.43
PRIM1-206ENST00000550770 BCORL1Q5H9F3 1711 aa17.75■□□□□ 0.43
PRIM1-206ENST00000550770 TRAPPC8Q9Y2L5 1435 aa17.73■□□□□ 0.43
PRIM1-206ENST00000550770 AFAP1Q8N556 730 aa17.73■□□□□ 0.43
PRIM1-206ENST00000550770 CCNB3Q8WWL7 1395 aa17.73■□□□□ 0.43
PRIM1-206ENST00000550770 HECW2Q9P2P5 1572 aa17.73■□□□□ 0.43
PRIM1-206ENST00000550770 PROM2Q8N271 834 aa17.71■□□□□ 0.43
PRIM1-206ENST00000550770 SYCP2Q9BX26 1530 aa17.71■□□□□ 0.43
PRIM1-206ENST00000550770 ARID4BQ4LE39 1312 aaPredicted RBP17.71■□□□□ 0.42
PRIM1-206ENST00000550770 MLH3Q9UHC1 1453 aa17.7■□□□□ 0.42
PRIM1-206ENST00000550770 MADDQ8WXG6 1647 aa17.7■□□□□ 0.42
PRIM1-206ENST00000550770 C9orf84Q5VXU9 1444 aa17.7■□□□□ 0.42
PRIM1-206ENST00000550770 DIP2CQ9Y2E4 1556 aa17.7■□□□□ 0.42
PRIM1-206ENST00000550770 ATP10AO60312 1499 aa17.69■□□□□ 0.42
PRIM1-206ENST00000550770 ZNF777Q9ULD5 760 aaPredicted RBP17.69■□□□□ 0.42
PRIM1-206ENST00000550770 NCOA2Q15596 1464 aa17.69■□□□□ 0.42
PRIM1-206ENST00000550770 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
PRIM1-206ENST00000550770 SUPT6HQ7KZ85 1726 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms