RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 HNRNPUQ00839 825 aaKnown RBP eCLIP12.84□□□□□ -0.35
UBE2N-205ENST00000550657 ZNF326Q5BKZ1 582 aaKnown RBP12.83□□□□□ -0.35
UBE2N-205ENST00000550657 PRG4Q92954 1404 aaPredicted RBP12.83□□□□□ -0.36
UBE2N-205ENST00000550657 KIAA0586Q9BVV6 1533 aa12.82□□□□□ -0.36
UBE2N-205ENST00000550657 DISP1Q96F81 1524 aa12.82□□□□□ -0.36
UBE2N-205ENST00000550657 DAPK1P53355 1430 aa12.82□□□□□ -0.36
UBE2N-205ENST00000550657 POLR3GLQ9BT43 218 aa12.82□□□□□ -0.36
UBE2N-205ENST00000550657 TSHZ2Q9NRE2 1034 aa12.82□□□□□ -0.36
UBE2N-205ENST00000550657 ABCC5O15440 1437 aa12.81□□□□□ -0.36
UBE2N-205ENST00000550657 NUP153P49790 1475 aaKnown RBP12.81□□□□□ -0.36
UBE2N-205ENST00000550657 KDM5BQ9UGL1 1544 aa12.81□□□□□ -0.36
UBE2N-205ENST00000550657 NBPF8Q3BBV2 869 aa12.8□□□□□ -0.36
UBE2N-205ENST00000550657 C11orf95C9JLR9 678 aaPredicted RBP12.8□□□□□ -0.36
UBE2N-205ENST00000550657 GRIN2AQ12879 1464 aa12.8□□□□□ -0.36
UBE2N-205ENST00000550657 PLB1Q6P1J6 1458 aa12.79□□□□□ -0.36
UBE2N-205ENST00000550657 IRX6P78412 446 aaPredicted RBP12.78□□□□□ -0.36
UBE2N-205ENST00000550657 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
UBE2N-205ENST00000550657 KIAA0556O60303 1618 aa12.78□□□□□ -0.36
UBE2N-205ENST00000550657 CCDC184Q52MB2 194 aa12.78□□□□□ -0.36
UBE2N-205ENST00000550657 FAM9BQ8IZU0 186 aa12.77□□□□□ -0.37
UBE2N-205ENST00000550657 AKNAQ7Z591 1439 aa12.77□□□□□ -0.37
UBE2N-205ENST00000550657 ANKRD30BQ9BXX2 1392 aa12.76□□□□□ -0.37
UBE2N-205ENST00000550657 MAGI1Q96QZ7 1491 aaPredicted RBP12.75□□□□□ -0.37
UBE2N-205ENST00000550657 GCC2Q8IWJ2 1684 aa12.74□□□□□ -0.37
UBE2N-205ENST00000550657 ROCK1Q13464 1354 aa12.74□□□□□ -0.37
UBE2N-205ENST00000550657 PLEKHD1A6NEE1 506 aa12.73□□□□□ -0.37
UBE2N-205ENST00000550657 PKD2Q13563 968 aa12.73□□□□□ -0.37
UBE2N-205ENST00000550657 TROQ12816 1431 aaPredicted RBP12.73□□□□□ -0.37
UBE2N-205ENST00000550657 CEP170Q5SW79 1584 aa12.73□□□□□ -0.37
UBE2N-205ENST00000550657 RAPGEF6Q8TEU7 1601 aa12.73□□□□□ -0.37
UBE2N-205ENST00000550657 MRS2Q9HD23 443 aa12.72□□□□□ -0.37
UBE2N-205ENST00000550657 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
UBE2N-205ENST00000550657 CCDC7Q96M83 1385 aa12.71□□□□□ -0.37
UBE2N-205ENST00000550657 CAMSAP2Q08AD1 1489 aa12.71□□□□□ -0.38
UBE2N-205ENST00000550657 CARMIL2Q6F5E8 1435 aa12.71□□□□□ -0.38
UBE2N-205ENST00000550657 RPRD2Q5VT52 1461 aaKnown RBP12.7□□□□□ -0.38
UBE2N-205ENST00000550657 SENP3-EIF4A1A0A087X0R7 540 aa12.7□□□□□ -0.38
UBE2N-205ENST00000550657 PRKRIP1Q9H875 184 aaPredicted RBP12.7□□□□□ -0.38
UBE2N-205ENST00000550657 KIF7Q2M1P5 1343 aa12.69□□□□□ -0.38
UBE2N-205ENST00000550657 CNTLNQ9NXG0 1405 aa12.69□□□□□ -0.38
UBE2N-205ENST00000550657 KDM2AQ9Y2K7 1162 aa12.69□□□□□ -0.38
UBE2N-205ENST00000550657 GPATCH8Q9UKJ3 1502 aaKnown RBP12.69□□□□□ -0.38
UBE2N-205ENST00000550657 HNRNPMP52272 730 aaKnown RBP eCLIP12.69□□□□□ -0.386e-8■■□□□ 14
UBE2N-205ENST00000550657 NCOA1Q15788 1441 aa12.69□□□□□ -0.38
UBE2N-205ENST00000550657 DNMT1P26358 1616 aaKnown RBP12.68□□□□□ -0.38
UBE2N-205ENST00000550657 ANKRD30AQ9BXX3 1397 aa12.67□□□□□ -0.38
UBE2N-205ENST00000550657 TSPY4P0CV99 314 aa12.67□□□□□ -0.38
UBE2N-205ENST00000550657 TSPY10P0CW01 314 aa12.67□□□□□ -0.38
UBE2N-205ENST00000550657 TEX14Q8IWB6 1497 aa12.66□□□□□ -0.38
UBE2N-205ENST00000550657 KIF14Q15058 1648 aa12.66□□□□□ -0.38
UBE2N-205ENST00000550657 NUP155O75694 1391 aa12.66□□□□□ -0.38
UBE2N-205ENST00000550657 PZPP20742 1482 aa12.65□□□□□ -0.38
UBE2N-205ENST00000550657 NUP160Q12769 1436 aa12.65□□□□□ -0.38
UBE2N-205ENST00000550657 ANKRD50Q9ULJ7 1429 aa12.64□□□□□ -0.39
UBE2N-205ENST00000550657 KIAA1107Q9UPP5 1409 aa12.63□□□□□ -0.39
UBE2N-205ENST00000550657 USP47Q96K76 1375 aa12.62□□□□□ -0.39
UBE2N-205ENST00000550657 CARD11Q9BXL7 1154 aa12.62□□□□□ -0.39
UBE2N-205ENST00000550657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
UBE2N-205ENST00000550657 DCAF11Q8TEB1 546 aa12.61□□□□□ -0.39
UBE2N-205ENST00000550657 ATP10BO94823 1461 aa12.61□□□□□ -0.39
UBE2N-205ENST00000550657 C9orf84Q5VXU9 1444 aa12.6□□□□□ -0.39
UBE2N-205ENST00000550657 RBM19Q9Y4C8 960 aaKnown RBP12.6□□□□□ -0.39
UBE2N-205ENST00000550657 SPATA31E1Q6ZUB1 1445 aa12.6□□□□□ -0.39
UBE2N-205ENST00000550657 MYT1Q01538 1121 aa12.59□□□□□ -0.39
UBE2N-205ENST00000550657 PTPRGP23470 1445 aa12.59□□□□□ -0.39
UBE2N-205ENST00000550657 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
UBE2N-205ENST00000550657 KIF15Q9NS87 1388 aa12.58□□□□□ -0.4
UBE2N-205ENST00000550657 ST20-MTHFSA0A0A6YYL1 179 aa12.56□□□□□ -0.4
UBE2N-205ENST00000550657 ADGRL2O95490 1459 aa12.56□□□□□ -0.4
UBE2N-205ENST00000550657 ITSN2Q9NZM3 1697 aa12.55□□□□□ -0.4
UBE2N-205ENST00000550657 ADCY10Q96PN6 1610 aa12.55□□□□□ -0.4
UBE2N-205ENST00000550657 ABCA8O94911 1581 aa12.54□□□□□ -0.4
UBE2N-205ENST00000550657 B4GALNT3Q6L9W6 998 aa12.54□□□□□ -0.4
UBE2N-205ENST00000550657 ABCC10Q5T3U5 1492 aa12.53□□□□□ -0.4
UBE2N-205ENST00000550657 ZBED9Q6R2W3 1325 aa12.53□□□□□ -0.4
UBE2N-205ENST00000550657 CHD1O14646 1710 aa12.52□□□□□ -0.4
UBE2N-205ENST00000550657 TMC1Q8TDI8 760 aa12.52□□□□□ -0.4
UBE2N-205ENST00000550657 DHX29Q7Z478 1369 aaKnown RBP12.51□□□□□ -0.41
UBE2N-205ENST00000550657 MBD5Q9P267 1494 aa12.5□□□□□ -0.41
UBE2N-205ENST00000550657 SALL2Q9Y467 1007 aaPredicted RBP12.5□□□□□ -0.41
UBE2N-205ENST00000550657 ADGBQ8N7X0 1667 aa12.5□□□□□ -0.41
UBE2N-205ENST00000550657 ROCK2O75116 1388 aaKnown RBP12.5□□□□□ -0.41
UBE2N-205ENST00000550657 ANP32EQ9BTT0 268 aa12.5□□□□□ -0.41
UBE2N-205ENST00000550657 PPP4R2Q9NY27 417 aa12.5□□□□□ -0.41
UBE2N-205ENST00000550657 CROCC2H7BZ55 1655 aa12.48□□□□□ -0.41
UBE2N-205ENST00000550657 NBPF1Q3BBV0 1214 aa12.48□□□□□ -0.41
UBE2N-205ENST00000550657 CDC42BPAQ5VT25 1732 aa12.48□□□□□ -0.41
UBE2N-205ENST00000550657 BCORL1Q5H9F3 1711 aa12.46□□□□□ -0.41
UBE2N-205ENST00000550657 SHANK2Q9UPX8 1470 aa12.46□□□□□ -0.41
UBE2N-205ENST00000550657 CCDC141Q6ZP82 1450 aa12.46□□□□□ -0.42
UBE2N-205ENST00000550657 CCDC144AA2RUR9 1427 aa12.45□□□□□ -0.42
UBE2N-205ENST00000550657 ARHGAP5Q13017 1502 aa12.45□□□□□ -0.42
UBE2N-205ENST00000550657 RALGAPBQ86X10 1494 aa12.45□□□□□ -0.42
UBE2N-205ENST00000550657 PNISRQ8TF01 805 aaKnown RBP12.44□□□□□ -0.42
UBE2N-205ENST00000550657 RSPH4AQ5TD94 716 aa12.43□□□□□ -0.42
UBE2N-205ENST00000550657 UHRF1BP1Q6BDS2 1440 aa12.43□□□□□ -0.42
UBE2N-205ENST00000550657 SHROOM2Q13796 1616 aa12.43□□□□□ -0.42
UBE2N-205ENST00000550657 KDM5CP41229 1560 aa12.43□□□□□ -0.42
UBE2N-205ENST00000550657 ARID4BQ4LE39 1312 aaPredicted RBP12.43□□□□□ -0.42
UBE2N-205ENST00000550657 NUDCQ9Y266 331 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms