RNA–Protein interactions for RNA: ENST00000546590.2

TMTC2-202, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 4,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-202ENST00000546590 NUTM2DQ5VT03 806 aaPredicted RBP11.32□□□□□ -0.6
TMTC2-202ENST00000546590 PPP4R2Q9NY27 417 aa11.32□□□□□ -0.6
TMTC2-202ENST00000546590 CASKIN1Q8WXD9 1431 aa11.31□□□□□ -0.6
TMTC2-202ENST00000546590 KIF7Q2M1P5 1343 aa11.31□□□□□ -0.6
TMTC2-202ENST00000546590 PLIN1O60240 522 aa11.3□□□□□ -0.6
TMTC2-202ENST00000546590 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
TMTC2-202ENST00000546590 LAS1LQ9Y4W2 734 aaKnown RBP11.29□□□□□ -0.6
TMTC2-202ENST00000546590 HMGXB3Q12766 1538 aa11.29□□□□□ -0.6
TMTC2-202ENST00000546590 WDR43Q15061 677 aaKnown RBP eCLIP11.29□□□□□ -0.6
TMTC2-202ENST00000546590 ARXQ96QS3 562 aa11.29□□□□□ -0.6
TMTC2-202ENST00000546590 UACAQ9BZF9 1416 aa11.28□□□□□ -0.6
TMTC2-202ENST00000546590 MAPKBP1O60336 1514 aa11.28□□□□□ -0.6
TMTC2-202ENST00000546590 PRG4Q92954 1404 aaPredicted RBP11.26□□□□□ -0.61
TMTC2-202ENST00000546590 NAIPQ13075 1403 aa11.26□□□□□ -0.61
TMTC2-202ENST00000546590 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
TMTC2-202ENST00000546590 RGS3P49796 1198 aa11.26□□□□□ -0.61
TMTC2-202ENST00000546590 ROCK2O75116 1388 aaKnown RBP11.25□□□□□ -0.61
TMTC2-202ENST00000546590 CCDC146Q8IYE0 955 aa11.25□□□□□ -0.61
TMTC2-202ENST00000546590 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
TMTC2-202ENST00000546590 NBPF1Q3BBV0 1214 aa11.25□□□□□ -0.61
TMTC2-202ENST00000546590 KNSTRNQ9Y448 316 aa11.24□□□□□ -0.61
TMTC2-202ENST00000546590 BIVM-ERCC5R4GMW8 1640 aa11.24□□□□□ -0.61
TMTC2-202ENST00000546590 PRDM2Q13029 1718 aa11.24□□□□□ -0.61
TMTC2-202ENST00000546590 USP47Q96K76 1375 aa11.24□□□□□ -0.61
TMTC2-202ENST00000546590 SKAP1Q86WV1 359 aa11.24□□□□□ -0.61
TMTC2-202ENST00000546590 CCDC7Q96M83 1385 aa11.23□□□□□ -0.61
TMTC2-202ENST00000546590 FYCO1Q9BQS8 1478 aa11.23□□□□□ -0.61
TMTC2-202ENST00000546590 GGT6Q6P531 493 aa11.22□□□□□ -0.61
TMTC2-202ENST00000546590 URB2Q14146 1524 aaKnown RBP11.22□□□□□ -0.61
TMTC2-202ENST00000546590 SLC24A1O60721 1099 aa11.21□□□□□ -0.61
TMTC2-202ENST00000546590 PPM1GO15355 546 aaPredicted RBP11.21□□□□□ -0.61
TMTC2-202ENST00000546590 ANKRD30AQ9BXX3 1397 aa11.21□□□□□ -0.61
TMTC2-202ENST00000546590 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.62
TMTC2-202ENST00000546590 CDCA7LQ96GN5 454 aa11.21□□□□□ -0.62
TMTC2-202ENST00000546590 HFM1A2PYH4 1435 aa11.2□□□□□ -0.62
TMTC2-202ENST00000546590 FRAT1Q92837 279 aaPredicted RBP11.2□□□□□ -0.62
TMTC2-202ENST00000546590 EXOC6Q8TAG9 804 aa11.2□□□□□ -0.62
TMTC2-202ENST00000546590 PANK3Q9H999 370 aa11.2□□□□□ -0.62
TMTC2-202ENST00000546590 ZNF608Q9ULD9 1512 aaPredicted RBP11.19□□□□□ -0.62
TMTC2-202ENST00000546590 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
TMTC2-202ENST00000546590 AKNAQ7Z591 1439 aa11.19□□□□□ -0.62
TMTC2-202ENST00000546590 KIF3BO15066 747 aa11.18□□□□□ -0.62
TMTC2-202ENST00000546590 NPM1P06748 294 aaKnown RBP eCLIP11.17□□□□□ -0.62
TMTC2-202ENST00000546590 STK26Q9P289 416 aa11.17□□□□□ -0.62
TMTC2-202ENST00000546590 NUDCQ9Y266 331 aa11.17□□□□□ -0.62
TMTC2-202ENST00000546590 ABCA10Q8WWZ4 1543 aa11.17□□□□□ -0.62
TMTC2-202ENST00000546590 RCAN3Q9UKA8 241 aa11.17□□□□□ -0.62
TMTC2-202ENST00000546590 SLC4A3P48751 1232 aa11.16□□□□□ -0.62
TMTC2-202ENST00000546590 CARMIL2Q6F5E8 1435 aa11.16□□□□□ -0.62
TMTC2-202ENST00000546590 DNMBPQ6XZF7 1577 aa11.16□□□□□ -0.62
TMTC2-202ENST00000546590 RRP7AQ9Y3A4 280 aaKnown RBP11.16□□□□□ -0.62
TMTC2-202ENST00000546590 AFAP1Q8N556 730 aa11.16□□□□□ -0.62
TMTC2-202ENST00000546590 TMF1P82094 1093 aa11.16□□□□□ -0.62
TMTC2-202ENST00000546590 PLB1Q6P1J6 1458 aa11.15□□□□□ -0.62
TMTC2-202ENST00000546590 MLECQ14165 292 aa11.15□□□□□ -0.63
TMTC2-202ENST00000546590 NOP58Q9Y2X3 529 aaKnown RBP11.15□□□□□ -0.63
TMTC2-202ENST00000546590 CNTLNQ9NXG0 1405 aa11.14□□□□□ -0.63
TMTC2-202ENST00000546590 EPRSP07814 1512 aaKnown RBP11.14□□□□□ -0.63
TMTC2-202ENST00000546590 MSH5O43196 834 aa11.13□□□□□ -0.63
TMTC2-202ENST00000546590 BCL2L13Q9BXK5 485 aa11.13□□□□□ -0.63
TMTC2-202ENST00000546590 ANKRD50Q9ULJ7 1429 aa11.13□□□□□ -0.63
TMTC2-202ENST00000546590 KIF15Q9NS87 1388 aa11.13□□□□□ -0.63
TMTC2-202ENST00000546590 ZBED9Q6R2W3 1325 aa11.13□□□□□ -0.63
TMTC2-202ENST00000546590 PTPRGP23470 1445 aa11.13□□□□□ -0.63
TMTC2-202ENST00000546590 TRAK1Q9UPV9 953 aa11.12□□□□□ -0.63
TMTC2-202ENST00000546590 KTN1Q86UP2 1357 aaKnown RBP11.12□□□□□ -0.63
TMTC2-202ENST00000546590 SNAPC4Q5SXM2 1469 aa11.12□□□□□ -0.63
TMTC2-202ENST00000546590 SOX12O15370 315 aa11.11□□□□□ -0.63
TMTC2-202ENST00000546590 CLUAP1Q96AJ1 413 aa11.11□□□□□ -0.63
TMTC2-202ENST00000546590 U2SURPO15042 1029 aaKnown RBP11.11□□□□□ -0.63
TMTC2-202ENST00000546590 SPRYD3Q8NCJ5 442 aa11.1□□□□□ -0.63
TMTC2-202ENST00000546590 DAPK1P53355 1430 aa11.1□□□□□ -0.63
TMTC2-202ENST00000546590 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
TMTC2-202ENST00000546590 GRIN2BQ13224 1484 aa11.09□□□□□ -0.63
TMTC2-202ENST00000546590 NLRP13Q86W25 1043 aa11.09□□□□□ -0.63
TMTC2-202ENST00000546590 THOC2Q8NI27 1593 aaKnown RBP11.09□□□□□ -0.63
TMTC2-202ENST00000546590 DEKP35659 375 aaKnown RBP11.09□□□□□ -0.63
TMTC2-202ENST00000546590 CCDC144AA2RUR9 1427 aa11.09□□□□□ -0.63
TMTC2-202ENST00000546590 EFCAB5A4FU69 1503 aa11.08□□□□□ -0.64
TMTC2-202ENST00000546590 ABCC5O15440 1437 aa11.08□□□□□ -0.64
TMTC2-202ENST00000546590 NEFMP07197 916 aa11.08□□□□□ -0.64
TMTC2-202ENST00000546590 EFCAB2Q5VUJ9 269 aa11.08□□□□□ -0.64
TMTC2-202ENST00000546590 CRBNQ96SW2 442 aa11.08□□□□□ -0.64
TMTC2-202ENST00000546590 ANKRD30BQ9BXX2 1392 aa11.08□□□□□ -0.64
TMTC2-202ENST00000546590 PTPN23Q9H3S7 1636 aa11.07□□□□□ -0.64
TMTC2-202ENST00000546590 SPAG9O60271 1321 aaKnown RBP11.07□□□□□ -0.64
TMTC2-202ENST00000546590 TMEM132EQ6IEE7 984 aa11.07□□□□□ -0.64
TMTC2-202ENST00000546590 MYBBP1AQ9BQG0 1328 aaKnown RBP11.07□□□□□ -0.64
TMTC2-202ENST00000546590 PNISRQ8TF01 805 aaKnown RBP11.06□□□□□ -0.64
TMTC2-202ENST00000546590 ADAMTS8Q9UP79 889 aa11.06□□□□□ -0.64
TMTC2-202ENST00000546590 ARHGEF11O15085 1522 aa11.06□□□□□ -0.64
TMTC2-202ENST00000546590 APAF1O14727 1248 aa11.06□□□□□ -0.64
TMTC2-202ENST00000546590 RALBP1Q15311 655 aa11.05□□□□□ -0.64
TMTC2-202ENST00000546590 EHBP1L1Q8N3D4 1523 aa11.05□□□□□ -0.64
TMTC2-202ENST00000546590 RRP1P56182 461 aaKnown RBP11.05□□□□□ -0.64
TMTC2-202ENST00000546590 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
TMTC2-202ENST00000546590 SUPT6HQ7KZ85 1726 aaKnown RBP11.04□□□□□ -0.64
TMTC2-202ENST00000546590 CFAP70Q5T0N1 1121 aa11.04□□□□□ -0.64
TMTC2-202ENST00000546590 MORC1Q86VD1 984 aa11.04□□□□□ -0.64
TMTC2-202ENST00000546590 SRPK2P78362 688 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms