RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
LDHA-223ENST00000545215 APLP2Q06481 763 aa12.58□□□□□ -0.4
LDHA-223ENST00000545215 PHLDB1Q86UU1 1377 aa12.55□□□□□ -0.4
LDHA-223ENST00000545215 CARMIL2Q6F5E8 1435 aa12.54□□□□□ -0.4
LDHA-223ENST00000545215 KCNH8Q96L42 1107 aa12.54□□□□□ -0.4
LDHA-223ENST00000545215 POGZQ7Z3K3 1410 aa12.54□□□□□ -0.4
LDHA-223ENST00000545215 TTC37Q6PGP7 1564 aa12.53□□□□□ -0.4
LDHA-223ENST00000545215 PIP4K2BP78356 416 aa12.52□□□□□ -0.41
LDHA-223ENST00000545215 SRCAPQ6ZRS2 3230 aa12.51□□□□□ -0.41
LDHA-223ENST00000545215 UHRF1BP1Q6BDS2 1440 aa12.5□□□□□ -0.41
LDHA-223ENST00000545215 ZNF335Q9H4Z2 1342 aaPredicted RBP12.49□□□□□ -0.41
LDHA-223ENST00000545215 SPDYE4A6NLX3 237 aa12.48□□□□□ -0.41
LDHA-223ENST00000545215 CEBPAP49715 358 aaPredicted RBP12.48□□□□□ -0.41
LDHA-223ENST00000545215 POTEAQ6S8J7 498 aa12.48□□□□□ -0.41
LDHA-223ENST00000545215 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
LDHA-223ENST00000545215 TOM1O60784 492 aa12.47□□□□□ -0.41
LDHA-223ENST00000545215 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
LDHA-223ENST00000545215 FANCAO15360 1455 aa12.47□□□□□ -0.41
LDHA-223ENST00000545215 IFFO2Q5TF58 517 aa12.46□□□□□ -0.41
LDHA-223ENST00000545215 FRMPD1Q5SYB0 1578 aa12.46□□□□□ -0.42
LDHA-223ENST00000545215 FER1L4A9Z1Z3 1794 aa12.46□□□□□ -0.42
LDHA-223ENST00000545215 ARHGEF40Q8TER5 1519 aa12.45□□□□□ -0.42
LDHA-223ENST00000545215 PROM2Q8N271 834 aa12.45□□□□□ -0.42
LDHA-223ENST00000545215 UPF1Q92900 1129 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■■□□□ 13.1
LDHA-223ENST00000545215 SETD1BQ9UPS6 1966 aaKnown RBP12.44□□□□□ -0.42
LDHA-223ENST00000545215 MLECQ14165 292 aa12.43□□□□□ -0.42
LDHA-223ENST00000545215 NCOA1Q15788 1441 aa12.43□□□□□ -0.42
LDHA-223ENST00000545215 SIGLEC1Q9BZZ2 1709 aa12.4□□□□□ -0.42
LDHA-223ENST00000545215 NEO1Q92859 1461 aa12.39□□□□□ -0.43
LDHA-223ENST00000545215 AKNAQ7Z591 1439 aa12.39□□□□□ -0.43
LDHA-223ENST00000545215 ARHGEF12Q9NZN5 1544 aa12.37□□□□□ -0.43
LDHA-223ENST00000545215 SETD1AO15047 1707 aaKnown RBP12.37□□□□□ -0.43
LDHA-223ENST00000545215 DISP1Q96F81 1524 aa12.37□□□□□ -0.43
LDHA-223ENST00000545215 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
LDHA-223ENST00000545215 KIAA0556O60303 1618 aa12.32□□□□□ -0.44
LDHA-223ENST00000545215 NCKAP5LQ9HCH0 1330 aa12.32□□□□□ -0.44
LDHA-223ENST00000545215 FHOD3Q2V2M9 1422 aa12.3□□□□□ -0.44
LDHA-223ENST00000545215 ABCA9Q8IUA7 1624 aa12.29□□□□□ -0.44
LDHA-223ENST00000545215 BIVM-ERCC5R4GMW8 1640 aa12.29□□□□□ -0.44
LDHA-223ENST00000545215 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
LDHA-223ENST00000545215 PTPRKQ15262 1439 aa12.29□□□□□ -0.44
LDHA-223ENST00000545215 DENND4BO75064 1496 aaPredicted RBP12.29□□□□□ -0.44
LDHA-223ENST00000545215 CAMSAP1Q5T5Y3 1602 aa12.28□□□□□ -0.44
LDHA-223ENST00000545215 IQGAP2Q13576 1575 aa12.28□□□□□ -0.44
LDHA-223ENST00000545215 ALKQ9UM73 1620 aa12.28□□□□□ -0.44
LDHA-223ENST00000545215 RICTORQ6R327 1708 aa12.28□□□□□ -0.44
LDHA-223ENST00000545215 ZFYVE16Q7Z3T8 1539 aa12.27□□□□□ -0.45
LDHA-223ENST00000545215 TRAPPC8Q9Y2L5 1435 aa12.26□□□□□ -0.45
LDHA-223ENST00000545215 IGF1RP08069 1367 aa12.26□□□□□ -0.45
LDHA-223ENST00000545215 PKD2Q13563 968 aa12.26□□□□□ -0.45
LDHA-223ENST00000545215 POLA2Q14181 598 aa12.26□□□□□ -0.45
LDHA-223ENST00000545215 EFCAB5A4FU69 1503 aa12.25□□□□□ -0.45
LDHA-223ENST00000545215 MAGI2Q86UL8 1455 aa12.25□□□□□ -0.45
LDHA-223ENST00000545215 ZMYM4Q5VZL5 1548 aa12.24□□□□□ -0.45
LDHA-223ENST00000545215 CPS1P31327 1500 aa12.23□□□□□ -0.45
LDHA-223ENST00000545215 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
LDHA-223ENST00000545215 RNF39Q9H2S5 420 aa12.2□□□□□ -0.46
LDHA-223ENST00000545215 C3P01024 1663 aa12.2□□□□□ -0.46
LDHA-223ENST00000545215 ATP10AO60312 1499 aa12.19□□□□□ -0.46
LDHA-223ENST00000545215 PLCB2Q00722 1185 aa12.18□□□□□ -0.46
LDHA-223ENST00000545215 UGGT2Q9NYU1 1516 aa12.18□□□□□ -0.46
LDHA-223ENST00000545215 PLA2R1Q13018 1463 aa12.18□□□□□ -0.46
LDHA-223ENST00000545215 ABCA8O94911 1581 aa12.18□□□□□ -0.46
LDHA-223ENST00000545215 TCOF1Q13428 1488 aaKnown RBP12.17□□□□□ -0.46
LDHA-223ENST00000545215 CAPN15O75808 1086 aa12.16□□□□□ -0.46
LDHA-223ENST00000545215 RAPGEF2Q9Y4G8 1499 aa12.16□□□□□ -0.46
LDHA-223ENST00000545215 C9orf84Q5VXU9 1444 aa12.16□□□□□ -0.46
LDHA-223ENST00000545215 RBM33Q96EV2 1170 aaKnown RBP12.15□□□□□ -0.46
LDHA-223ENST00000545215 SHANK2Q9UPX8 1470 aa12.15□□□□□ -0.46
LDHA-223ENST00000545215 HECW1Q76N89 1606 aa12.14□□□□□ -0.47
LDHA-223ENST00000545215 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
LDHA-223ENST00000545215 CARMIL1Q5VZK9 1371 aa12.12□□□□□ -0.47
LDHA-223ENST00000545215 TRIM52Q96A61 297 aa12.11□□□□□ -0.47
LDHA-223ENST00000545215 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
LDHA-223ENST00000545215 ATP10BO94823 1461 aa12.1□□□□□ -0.47
LDHA-223ENST00000545215 SETBP1Q9Y6X0 1596 aa12.09□□□□□ -0.47
LDHA-223ENST00000545215 NPATQ14207 1427 aa12.09□□□□□ -0.47
LDHA-223ENST00000545215 C1QBPQ07021 282 aaKnown RBP12.08□□□□□ -0.48
LDHA-223ENST00000545215 ESF1Q9H501 851 aaKnown RBP12.08□□□□□ -0.48
LDHA-223ENST00000545215 ARID3CA6NKF2 412 aa12.06□□□□□ -0.48
LDHA-223ENST00000545215 LRRC7Q96NW7 1537 aa12.05□□□□□ -0.48
LDHA-223ENST00000545215 CFAP74Q9C0B2 1584 aa12.05□□□□□ -0.48
LDHA-223ENST00000545215 KIF27Q86VH2 1401 aa12.04□□□□□ -0.48
LDHA-223ENST00000545215 ZNF142P52746 1687 aaPredicted RBP12.02□□□□□ -0.49
LDHA-223ENST00000545215 ZNF772Q68DY9 489 aaPredicted RBP12.02□□□□□ -0.49
LDHA-223ENST00000545215 SUPT6HQ7KZ85 1726 aaKnown RBP12.01□□□□□ -0.49
LDHA-223ENST00000545215 VWDEQ8N2E2 1590 aa12.01□□□□□ -0.49
LDHA-223ENST00000545215 CDK12Q9NYV4 1490 aaPredicted RBP12.01□□□□□ -0.49
LDHA-223ENST00000545215 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
LDHA-223ENST00000545215 ABCB7O75027 752 aa12.01□□□□□ -0.49
LDHA-223ENST00000545215 RXRBP28702 533 aa12.01□□□□□ -0.49
LDHA-223ENST00000545215 SCAPERQ9BY12 1400 aa12□□□□□ -0.49
LDHA-223ENST00000545215 RNF17Q9BXT8 1623 aaKnown RBP12□□□□□ -0.49
LDHA-223ENST00000545215 AGLP35573 1532 aa12□□□□□ -0.49
LDHA-223ENST00000545215 FAM135BQ49AJ0 1406 aa11.98□□□□□ -0.49
LDHA-223ENST00000545215 CEP170BQ9Y4F5 1589 aaPredicted RBP11.98□□□□□ -0.49
LDHA-223ENST00000545215 HAP1P54257 671 aaPredicted RBP11.97□□□□□ -0.49
LDHA-223ENST00000545215 GOLGA3Q08378 1498 aa11.96□□□□□ -0.49
LDHA-223ENST00000545215 ZMYM3Q14202 1370 aa11.96□□□□□ -0.5
LDHA-223ENST00000545215 MYO3AQ8NEV4 1616 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms