RNA–Protein interactions for RNA: ENST00000544868.2

MALAT1-203, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-203ENST00000544868 RAPGEF3O95398 923 aa15.06■□□□□ 0
MALAT1-203ENST00000544868 POGZQ7Z3K3 1410 aa15.06■□□□□ 0
MALAT1-203ENST00000544868 ARHGEF40Q8TER5 1519 aa15.06■□□□□ 0
MALAT1-203ENST00000544868 UHRF1BP1Q6BDS2 1440 aa15.05■□□□□ -0
MALAT1-203ENST00000544868 RGS17Q9UGC6 210 aaPredicted RBP15.04■□□□□ -0
MALAT1-203ENST00000544868 FANCAO15360 1455 aa15.03■□□□□ -0
MALAT1-203ENST00000544868 APLP2Q06481 763 aa15.03■□□□□ -0
MALAT1-203ENST00000544868 FRMPD1Q5SYB0 1578 aa15.02■□□□□ -0
MALAT1-203ENST00000544868 PIP4K2BP78356 416 aa15.02■□□□□ -0
MALAT1-203ENST00000544868 KCNH8Q96L42 1107 aa15.01□□□□□ -0.01
MALAT1-203ENST00000544868 PHLDB1Q86UU1 1377 aa14.99□□□□□ -0.01
MALAT1-203ENST00000544868 SETD1AO15047 1707 aaKnown RBP14.99□□□□□ -0.01
MALAT1-203ENST00000544868 ZNF335Q9H4Z2 1342 aaPredicted RBP14.98□□□□□ -0.01
MALAT1-203ENST00000544868 MLECQ14165 292 aa14.96□□□□□ -0.01
MALAT1-203ENST00000544868 SIGLEC1Q9BZZ2 1709 aa14.95□□□□□ -0.02
MALAT1-203ENST00000544868 SETD1BQ9UPS6 1966 aaKnown RBP14.95□□□□□ -0.02
MALAT1-203ENST00000544868 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
MALAT1-203ENST00000544868 CEBPAP49715 358 aaPredicted RBP14.94□□□□□ -0.02
MALAT1-203ENST00000544868 NCOA1Q15788 1441 aa14.93□□□□□ -0.02
MALAT1-203ENST00000544868 TOM1O60784 492 aa14.91□□□□□ -0.02
MALAT1-203ENST00000544868 POTEAQ6S8J7 498 aa14.9□□□□□ -0.02
MALAT1-203ENST00000544868 KIAA0556O60303 1618 aa14.9□□□□□ -0.02
MALAT1-203ENST00000544868 AKNAQ7Z591 1439 aa14.9□□□□□ -0.02
MALAT1-203ENST00000544868 NEO1Q92859 1461 aa14.89□□□□□ -0.03
MALAT1-203ENST00000544868 ARHGEF12Q9NZN5 1544 aa14.87□□□□□ -0.03
MALAT1-203ENST00000544868 DISP1Q96F81 1524 aa14.86□□□□□ -0.03
MALAT1-203ENST00000544868 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
MALAT1-203ENST00000544868 IFFO2Q5TF58 517 aa14.85□□□□□ -0.03
MALAT1-203ENST00000544868 UPF1Q92900 1129 aaKnown RBP eCLIP14.85□□□□□ -0.03
MALAT1-203ENST00000544868 IQGAP2Q13576 1575 aa14.82□□□□□ -0.04
MALAT1-203ENST00000544868 RICTORQ6R327 1708 aa14.82□□□□□ -0.04
MALAT1-203ENST00000544868 ZFYVE16Q7Z3T8 1539 aa14.81□□□□□ -0.04
MALAT1-203ENST00000544868 ABCA9Q8IUA7 1624 aa14.81□□□□□ -0.04
MALAT1-203ENST00000544868 CAPN15O75808 1086 aa14.8□□□□□ -0.04
MALAT1-203ENST00000544868 SPINK5Q9NQ38 1064 aaPredicted RBP14.8□□□□□ -0.04
MALAT1-203ENST00000544868 EFCAB5A4FU69 1503 aa14.79□□□□□ -0.04
MALAT1-203ENST00000544868 CAMSAP1Q5T5Y3 1602 aa14.79□□□□□ -0.04
MALAT1-203ENST00000544868 DENND4BO75064 1496 aaPredicted RBP14.77□□□□□ -0.04
MALAT1-203ENST00000544868 ZNF219Q9P2Y4 722 aaPredicted RBP14.76□□□□□ -0.05
MALAT1-203ENST00000544868 ZMYM4Q5VZL5 1548 aa14.76□□□□□ -0.05
MALAT1-203ENST00000544868 ATF5Q9Y2D1 282 aaPredicted RBP14.75□□□□□ -0.05
MALAT1-203ENST00000544868 FHOD3Q2V2M9 1422 aa14.75□□□□□ -0.05
MALAT1-203ENST00000544868 NCKAP5LQ9HCH0 1330 aa14.74□□□□□ -0.05
MALAT1-203ENST00000544868 ALKQ9UM73 1620 aa14.74□□□□□ -0.05
MALAT1-203ENST00000544868 PTPRKQ15262 1439 aa14.73□□□□□ -0.05
MALAT1-203ENST00000544868 C3P01024 1663 aa14.71□□□□□ -0.05
MALAT1-203ENST00000544868 CPS1P31327 1500 aa14.71□□□□□ -0.06
MALAT1-203ENST00000544868 MAGI2Q86UL8 1455 aa14.69□□□□□ -0.06
MALAT1-203ENST00000544868 TRAPPC8Q9Y2L5 1435 aa14.68□□□□□ -0.06
MALAT1-203ENST00000544868 ABCA8O94911 1581 aa14.67□□□□□ -0.06
MALAT1-203ENST00000544868 IGF1RP08069 1367 aa14.66□□□□□ -0.06
MALAT1-203ENST00000544868 UGGT2Q9NYU1 1516 aa14.66□□□□□ -0.06
MALAT1-203ENST00000544868 PKD2Q13563 968 aa14.64□□□□□ -0.07
MALAT1-203ENST00000544868 C9orf84Q5VXU9 1444 aa14.64□□□□□ -0.07
MALAT1-203ENST00000544868 PLA2R1Q13018 1463 aa14.63□□□□□ -0.07
MALAT1-203ENST00000544868 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
MALAT1-203ENST00000544868 ATP10AO60312 1499 aa14.61□□□□□ -0.07
MALAT1-203ENST00000544868 TCOF1Q13428 1488 aaKnown RBP14.61□□□□□ -0.07
MALAT1-203ENST00000544868 CFAP74Q9C0B2 1584 aa14.58□□□□□ -0.08
MALAT1-203ENST00000544868 SHANK2Q9UPX8 1470 aa14.57□□□□□ -0.08
MALAT1-203ENST00000544868 SUPT6HQ7KZ85 1726 aaKnown RBP14.57□□□□□ -0.08
MALAT1-203ENST00000544868 RAPGEF2Q9Y4G8 1499 aa14.57□□□□□ -0.08
MALAT1-203ENST00000544868 ARID3CA6NKF2 412 aa14.55□□□□□ -0.08
MALAT1-203ENST00000544868 TRIM52Q96A61 297 aa14.55□□□□□ -0.08
MALAT1-203ENST00000544868 RBM33Q96EV2 1170 aaKnown RBP14.55□□□□□ -0.08
MALAT1-203ENST00000544868 CARMIL1Q5VZK9 1371 aa14.54□□□□□ -0.08
MALAT1-203ENST00000544868 SETBP1Q9Y6X0 1596 aa14.53□□□□□ -0.08
MALAT1-203ENST00000544868 ZNF142P52746 1687 aaPredicted RBP14.52□□□□□ -0.08
MALAT1-203ENST00000544868 DSG3P32926 999 aa14.52□□□□□ -0.09
MALAT1-203ENST00000544868 LRRC7Q96NW7 1537 aa14.51□□□□□ -0.09
MALAT1-203ENST00000544868 ATP10BO94823 1461 aa14.51□□□□□ -0.09
MALAT1-203ENST00000544868 ESF1Q9H501 851 aaKnown RBP14.51□□□□□ -0.09
MALAT1-203ENST00000544868 RNF17Q9BXT8 1623 aaKnown RBP14.51□□□□□ -0.09
MALAT1-203ENST00000544868 ZRANB1Q9UGI0 708 aa14.5□□□□□ -0.09
MALAT1-203ENST00000544868 NPATQ14207 1427 aa14.49□□□□□ -0.09
MALAT1-203ENST00000544868 KIF27Q86VH2 1401 aa14.49□□□□□ -0.09
MALAT1-203ENST00000544868 ABCB7O75027 752 aa14.48□□□□□ -0.09
MALAT1-203ENST00000544868 POLA2Q14181 598 aa14.48□□□□□ -0.09
MALAT1-203ENST00000544868 MYO3AQ8NEV4 1616 aa14.47□□□□□ -0.09
MALAT1-203ENST00000544868 CEP170BQ9Y4F5 1589 aaPredicted RBP14.47□□□□□ -0.09
MALAT1-203ENST00000544868 VWDEQ8N2E2 1590 aa14.44□□□□□ -0.1
MALAT1-203ENST00000544868 CNTLNQ9NXG0 1405 aa14.43□□□□□ -0.1
MALAT1-203ENST00000544868 AGLP35573 1532 aa14.42□□□□□ -0.1
MALAT1-203ENST00000544868 POLR1AO95602 1720 aaPredicted RBP14.42□□□□□ -0.1
MALAT1-203ENST00000544868 SCAPERQ9BY12 1400 aa14.41□□□□□ -0.1
MALAT1-203ENST00000544868 NEURL4Q96JN8 1562 aa14.4□□□□□ -0.1
MALAT1-203ENST00000544868 GOLGA3Q08378 1498 aa14.4□□□□□ -0.1
MALAT1-203ENST00000544868 CDK12Q9NYV4 1490 aaPredicted RBP14.38□□□□□ -0.11
MALAT1-203ENST00000544868 ZNF772Q68DY9 489 aaPredicted RBP14.38□□□□□ -0.11
MALAT1-203ENST00000544868 REREQ9P2R6 1566 aa14.38□□□□□ -0.11
MALAT1-203ENST00000544868 MROH2AA6NES4 1674 aa14.37□□□□□ -0.11
MALAT1-203ENST00000544868 SYNMO15061 1565 aa14.37□□□□□ -0.11
MALAT1-203ENST00000544868 DIP2CQ9Y2E4 1556 aa14.35□□□□□ -0.11
MALAT1-203ENST00000544868 RXRBP28702 533 aa14.35□□□□□ -0.11
MALAT1-203ENST00000544868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.35□□□□□ -0.11
MALAT1-203ENST00000544868 LRP5O75197 1615 aa14.34□□□□□ -0.11
MALAT1-203ENST00000544868 RAPGEF6Q8TEU7 1601 aa14.33□□□□□ -0.11
MALAT1-203ENST00000544868 FAM135BQ49AJ0 1406 aa14.32□□□□□ -0.12
MALAT1-203ENST00000544868 STRCP1A6NGW2 1772 aa14.32□□□□□ -0.12
MALAT1-203ENST00000544868 ZBTB12Q9Y330 459 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms