RNA–Protein interactions for RNA: ENST00000542793.1

SLC3A2-219, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-219ENST00000542793 CFAP43Q8NDM7 1665 aa12.53□□□□□ -0.4
SLC3A2-219ENST00000542793 NUP153P49790 1475 aaKnown RBP12.52□□□□□ -0.41
SLC3A2-219ENST00000542793 WDR7Q9Y4E6 1490 aa12.52□□□□□ -0.41
SLC3A2-219ENST00000542793 ADGRL1O94910 1474 aa12.51□□□□□ -0.41
SLC3A2-219ENST00000542793 LRRIQ1Q96JM4 1722 aa12.51□□□□□ -0.41
SLC3A2-219ENST00000542793 CCDC18Q5T9S5 1454 aa12.5□□□□□ -0.41
SLC3A2-219ENST00000542793 ABCA8O94911 1581 aa12.5□□□□□ -0.41
SLC3A2-219ENST00000542793 HECW1Q76N89 1606 aa12.48□□□□□ -0.41
SLC3A2-219ENST00000542793 RAPGEF6Q8TEU7 1601 aa12.48□□□□□ -0.41
SLC3A2-219ENST00000542793 RRBP1Q9P2E9 1410 aaKnown RBP12.47□□□□□ -0.41
SLC3A2-219ENST00000542793 KCNH8Q96L42 1107 aa12.47□□□□□ -0.41
SLC3A2-219ENST00000542793 MAGI3Q5TCQ9 1506 aa12.47□□□□□ -0.41
SLC3A2-219ENST00000542793 ARID3CA6NKF2 412 aa12.46□□□□□ -0.41
SLC3A2-219ENST00000542793 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
SLC3A2-219ENST00000542793 ATP1B4Q9UN42 357 aaPredicted RBP12.46□□□□□ -0.41
SLC3A2-219ENST00000542793 CD109Q6YHK3 1445 aa12.45□□□□□ -0.42
SLC3A2-219ENST00000542793 PHLDB1Q86UU1 1377 aa12.44□□□□□ -0.42
SLC3A2-219ENST00000542793 CDK13Q14004 1512 aaKnown RBP12.44□□□□□ -0.42
SLC3A2-219ENST00000542793 ATP10BO94823 1461 aa12.43□□□□□ -0.42
SLC3A2-219ENST00000542793 MTUS2Q5JR59 1369 aa12.42□□□□□ -0.42
SLC3A2-219ENST00000542793 EHBP1L1Q8N3D4 1523 aa12.42□□□□□ -0.42
SLC3A2-219ENST00000542793 CCNB3Q8WWL7 1395 aa12.4□□□□□ -0.42
SLC3A2-219ENST00000542793 NCOA2Q15596 1464 aa12.4□□□□□ -0.43
SLC3A2-219ENST00000542793 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
SLC3A2-219ENST00000542793 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.38□□□□□ -0.43
SLC3A2-219ENST00000542793 HECW2Q9P2P5 1572 aa12.38□□□□□ -0.43
SLC3A2-219ENST00000542793 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
SLC3A2-219ENST00000542793 CDK11AQ9UQ88 783 aaPredicted RBP12.37□□□□□ -0.43
SLC3A2-219ENST00000542793 ABCA9Q8IUA7 1624 aa12.36□□□□□ -0.43
SLC3A2-219ENST00000542793 MYOM3Q5VTT5 1437 aa12.35□□□□□ -0.43
SLC3A2-219ENST00000542793 SUPT6HQ7KZ85 1726 aaKnown RBP12.34□□□□□ -0.43
SLC3A2-219ENST00000542793 ILDR1Q86SU0 546 aaPredicted RBP12.34□□□□□ -0.43
SLC3A2-219ENST00000542793 FGD6Q6ZV73 1430 aa12.34□□□□□ -0.43
SLC3A2-219ENST00000542793 ARAP3Q8WWN8 1544 aa12.32□□□□□ -0.44
SLC3A2-219ENST00000542793 MIA2Q96PC5 1412 aa12.31□□□□□ -0.44
SLC3A2-219ENST00000542793 PLEKHD1A6NEE1 506 aa12.31□□□□□ -0.44
SLC3A2-219ENST00000542793 TCOF1Q13428 1488 aaKnown RBP12.3□□□□□ -0.44
SLC3A2-219ENST00000542793 GPATCH8Q9UKJ3 1502 aaKnown RBP12.29□□□□□ -0.44
SLC3A2-219ENST00000542793 FRMPD1Q5SYB0 1578 aa12.28□□□□□ -0.44
SLC3A2-219ENST00000542793 KIF14Q15058 1648 aa12.27□□□□□ -0.44
SLC3A2-219ENST00000542793 ADAMTSL3P82987 1691 aa12.27□□□□□ -0.45
SLC3A2-219ENST00000542793 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.45
SLC3A2-219ENST00000542793 NEO1Q92859 1461 aa12.27□□□□□ -0.45
SLC3A2-219ENST00000542793 SIGLEC1Q9BZZ2 1709 aa12.26□□□□□ -0.45
SLC3A2-219ENST00000542793 RAPGEF3O95398 923 aa12.26□□□□□ -0.45
SLC3A2-219ENST00000542793 CFAP74Q9C0B2 1584 aa12.26□□□□□ -0.45
SLC3A2-219ENST00000542793 PTPRKQ15262 1439 aa12.25□□□□□ -0.45
SLC3A2-219ENST00000542793 ARID4BQ4LE39 1312 aaPredicted RBP12.24□□□□□ -0.45
SLC3A2-219ENST00000542793 BCORL1Q5H9F3 1711 aa12.24□□□□□ -0.45
SLC3A2-219ENST00000542793 RICTORQ6R327 1708 aa12.23□□□□□ -0.45
SLC3A2-219ENST00000542793 MADDQ8WXG6 1647 aa12.23□□□□□ -0.45
SLC3A2-219ENST00000542793 PTPN23Q9H3S7 1636 aa12.23□□□□□ -0.45
SLC3A2-219ENST00000542793 HRCP23327 699 aa12.23□□□□□ -0.45
SLC3A2-219ENST00000542793 FAM50AQ14320 339 aaKnown RBP12.23□□□□□ -0.45
SLC3A2-219ENST00000542793 TTC37Q6PGP7 1564 aa12.22□□□□□ -0.45
SLC3A2-219ENST00000542793 RIMS1Q86UR5 1692 aaKnown RBP12.22□□□□□ -0.45
SLC3A2-219ENST00000542793 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.21□□□□□ -0.454e-6■■■□□ 15.9
SLC3A2-219ENST00000542793 ARHGEF40Q8TER5 1519 aa12.21□□□□□ -0.45
SLC3A2-219ENST00000542793 PTPRMP28827 1452 aa12.21□□□□□ -0.45
SLC3A2-219ENST00000542793 FANCAO15360 1455 aa12.21□□□□□ -0.46
SLC3A2-219ENST00000542793 DENND4BO75064 1496 aaPredicted RBP12.21□□□□□ -0.46
SLC3A2-219ENST00000542793 ZNF644Q9H582 1327 aaPredicted RBP12.2□□□□□ -0.46
SLC3A2-219ENST00000542793 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
SLC3A2-219ENST00000542793 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
SLC3A2-219ENST00000542793 CFDP1Q9UEE9 299 aaPredicted RBP12.19□□□□□ -0.46
SLC3A2-219ENST00000542793 AKNAQ7Z591 1439 aa12.19□□□□□ -0.46
SLC3A2-219ENST00000542793 ABCC5O15440 1437 aa12.18□□□□□ -0.46
SLC3A2-219ENST00000542793 CDC42BPAQ5VT25 1732 aa12.17□□□□□ -0.46
SLC3A2-219ENST00000542793 MYO5CQ9NQX4 1742 aa12.17□□□□□ -0.46
SLC3A2-219ENST00000542793 ZFYVE16Q7Z3T8 1539 aa12.16□□□□□ -0.46
SLC3A2-219ENST00000542793 ITSN2Q9NZM3 1697 aa12.16□□□□□ -0.46
SLC3A2-219ENST00000542793 CAPN15O75808 1086 aa12.16□□□□□ -0.46
SLC3A2-219ENST00000542793 ITGAEP38570 1179 aa12.16□□□□□ -0.46
SLC3A2-219ENST00000542793 PLCH2O75038 1416 aa12.16□□□□□ -0.46
SLC3A2-219ENST00000542793 SETD5Q9C0A6 1442 aa12.16□□□□□ -0.46
SLC3A2-219ENST00000542793 CAMSAP2Q08AD1 1489 aa12.15□□□□□ -0.46
SLC3A2-219ENST00000542793 HFM1A2PYH4 1435 aa12.15□□□□□ -0.46
SLC3A2-219ENST00000542793 MBD5Q9P267 1494 aa12.14□□□□□ -0.47
SLC3A2-219ENST00000542793 DAPK1P53355 1430 aa12.14□□□□□ -0.47
SLC3A2-219ENST00000542793 NAIPQ13075 1403 aa12.14□□□□□ -0.47
SLC3A2-219ENST00000542793 ATF5Q9Y2D1 282 aaPredicted RBP12.14□□□□□ -0.47
SLC3A2-219ENST00000542793 ZMYM4Q5VZL5 1548 aa12.14□□□□□ -0.47
SLC3A2-219ENST00000542793 ROCK1Q13464 1354 aa12.14□□□□□ -0.47
SLC3A2-219ENST00000542793 PREX2Q70Z35 1606 aa12.14□□□□□ -0.47
SLC3A2-219ENST00000542793 RAB3GAP2Q9H2M9 1393 aa12.14□□□□□ -0.47
SLC3A2-219ENST00000542793 FER1L4A9Z1Z3 1794 aa12.13□□□□□ -0.47
SLC3A2-219ENST00000542793 DNMT1P26358 1616 aaKnown RBP12.13□□□□□ -0.47
SLC3A2-219ENST00000542793 CDC42BPBQ9Y5S2 1711 aa12.13□□□□□ -0.47
SLC3A2-219ENST00000542793 POGZQ7Z3K3 1410 aa12.12□□□□□ -0.47
SLC3A2-219ENST00000542793 YEATS2Q9ULM3 1422 aa12.12□□□□□ -0.47
SLC3A2-219ENST00000542793 KIAA1107Q9UPP5 1409 aa12.12□□□□□ -0.47
SLC3A2-219ENST00000542793 MLECQ14165 292 aa12.12□□□□□ -0.47
SLC3A2-219ENST00000542793 DHX57Q6P158 1386 aaKnown RBP12.11□□□□□ -0.47
SLC3A2-219ENST00000542793 SCAPERQ9BY12 1400 aa12.11□□□□□ -0.47
SLC3A2-219ENST00000542793 SAMD9LQ8IVG5 1584 aa12.1□□□□□ -0.47
SLC3A2-219ENST00000542793 LMTK3Q96Q04 1460 aa12.1□□□□□ -0.47
SLC3A2-219ENST00000542793 ARHGEF5Q12774 1597 aa12.09□□□□□ -0.47
SLC3A2-219ENST00000542793 ADGRL2O95490 1459 aa12.09□□□□□ -0.47
SLC3A2-219ENST00000542793 ZEB1P37275 1124 aaPredicted RBP12.09□□□□□ -0.47
SLC3A2-219ENST00000542793 RSPH4AQ5TD94 716 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms