RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 MIA2Q96PC5 1412 aa35.47■■■■□ 3.27
HOMER3-205ENST00000542541 ARHGAP5Q13017 1502 aa35.47■■■■□ 3.27
HOMER3-205ENST00000542541 CDC42BPAQ5VT25 1732 aa35.47■■■■□ 3.27
HOMER3-205ENST00000542541 PREX2Q70Z35 1606 aa35.47■■■■□ 3.27
HOMER3-205ENST00000542541 TEX14Q8IWB6 1497 aa35.45■■■■□ 3.27
HOMER3-205ENST00000542541 FANCAO15360 1455 aa35.44■■■■□ 3.26
HOMER3-205ENST00000542541 ZNF777Q9ULD5 760 aaPredicted RBP35.43■■■■□ 3.26
HOMER3-205ENST00000542541 FGD6Q6ZV73 1430 aa35.41■■■■□ 3.26
HOMER3-205ENST00000542541 CDC42BPBQ9Y5S2 1711 aa35.4■■■■□ 3.26
HOMER3-205ENST00000542541 NEO1Q92859 1461 aa35.38■■■■□ 3.25
HOMER3-205ENST00000542541 CFAP74Q9C0B2 1584 aa35.35■■■■□ 3.25
HOMER3-205ENST00000542541 AKNAQ7Z591 1439 aa35.33■■■■□ 3.25
HOMER3-205ENST00000542541 ZNF644Q9H582 1327 aaPredicted RBP35.31■■■■□ 3.24
HOMER3-205ENST00000542541 PLEKHH2Q8IVE3 1493 aa35.31■■■■□ 3.24
HOMER3-205ENST00000542541 RRBP1Q9P2E9 1410 aaKnown RBP35.29■■■■□ 3.24
HOMER3-205ENST00000542541 FAM50AQ14320 339 aaKnown RBP35.28■■■■□ 3.24
HOMER3-205ENST00000542541 PTPN23Q9H3S7 1636 aa35.27■■■■□ 3.24
HOMER3-205ENST00000542541 CAMSAP2Q08AD1 1489 aa35.27■■■■□ 3.24
HOMER3-205ENST00000542541 KIAA1107Q9UPP5 1409 aa35.26■■■■□ 3.24
HOMER3-205ENST00000542541 TCOF1Q13428 1488 aaKnown RBP35.26■■■■□ 3.24
HOMER3-205ENST00000542541 SAMD9LQ8IVG5 1584 aa35.26■■■■□ 3.23
HOMER3-205ENST00000542541 ADGRL1O94910 1474 aa35.25■■■■□ 3.23
HOMER3-205ENST00000542541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.23■■■■□ 3.23
HOMER3-205ENST00000542541 SCAPERQ9BY12 1400 aa35.23■■■■□ 3.23
HOMER3-205ENST00000542541 RSPH4AQ5TD94 716 aa35.21■■■■□ 3.23
HOMER3-205ENST00000542541 HNRNPMP52272 730 aaKnown RBP eCLIP35.21■■■■□ 3.23
HOMER3-205ENST00000542541 ABCC1P33527 1531 aa35.19■■■■□ 3.22
HOMER3-205ENST00000542541 COL17A1Q9UMD9 1497 aaPredicted RBP35.19■■■■□ 3.22
HOMER3-205ENST00000542541 KDM6BO15054 1643 aa35.18■■■■□ 3.22
HOMER3-205ENST00000542541 SYCP2Q9BX26 1530 aa35.15■■■■□ 3.22
HOMER3-205ENST00000542541 DENND4BO75064 1496 aaPredicted RBP35.15■■■■□ 3.22
HOMER3-205ENST00000542541 MBD5Q9P267 1494 aa35.14■■■■□ 3.22
HOMER3-205ENST00000542541 ARHGEF12Q9NZN5 1544 aa35.13■■■■□ 3.22
HOMER3-205ENST00000542541 ARHGEF5Q12774 1597 aa35.08■■■■□ 3.21
HOMER3-205ENST00000542541 AFAP1Q8N556 730 aa35.08■■■■□ 3.21
HOMER3-205ENST00000542541 TRAPPC8Q9Y2L5 1435 aa35.08■■■■□ 3.21
HOMER3-205ENST00000542541 ZNF518AQ6AHZ1 1483 aa35.08■■■■□ 3.21
HOMER3-205ENST00000542541 POGZQ7Z3K3 1410 aa35.07■■■■□ 3.21
HOMER3-205ENST00000542541 RAPGEF3O95398 923 aa35.07■■■■□ 3.21
HOMER3-205ENST00000542541 TSPY4P0CV99 314 aa35.07■■■■□ 3.21
HOMER3-205ENST00000542541 TSPY10P0CW01 314 aa35.07■■■■□ 3.21
HOMER3-205ENST00000542541 CCDC141Q6ZP82 1450 aa35.06■■■■□ 3.2
HOMER3-205ENST00000542541 FRMPD1Q5SYB0 1578 aa35.05■■■■□ 3.2
HOMER3-205ENST00000542541 TRIM26Q12899 539 aaPredicted RBP35.04■■■■□ 3.2
HOMER3-205ENST00000542541 RICTORQ6R327 1708 aa35.04■■■■□ 3.2
HOMER3-205ENST00000542541 DAPK1P53355 1430 aa35.03■■■■□ 3.2
HOMER3-205ENST00000542541 ABCC5O15440 1437 aa35.02■■■■□ 3.2
HOMER3-205ENST00000542541 ITGAEP38570 1179 aa35.02■■■■□ 3.2
HOMER3-205ENST00000542541 DNMT1P26358 1616 aaKnown RBP35.01■■■■□ 3.2
HOMER3-205ENST00000542541 SPAG9O60271 1321 aaKnown RBP34.99■■■■□ 3.19
HOMER3-205ENST00000542541 MYT1LQ9UL68 1186 aa34.95■■■■□ 3.19
HOMER3-205ENST00000542541 KDM5CP41229 1560 aa34.94■■■■□ 3.18
HOMER3-205ENST00000542541 SHANK2Q9UPX8 1470 aa34.94■■■■□ 3.18
HOMER3-205ENST00000542541 C9orf84Q5VXU9 1444 aa34.92■■■■□ 3.18
HOMER3-205ENST00000542541 RTEL1-TNFRSF6BF6WH68 1400 aa34.91■■■■□ 3.18
HOMER3-205ENST00000542541 MLH3Q9UHC1 1453 aa34.9■■■■□ 3.18
HOMER3-205ENST00000542541 CHIC2Q9UKJ5 165 aa34.9■■■■□ 3.18
HOMER3-205ENST00000542541 PTPRKQ15262 1439 aa34.88■■■■□ 3.17
HOMER3-205ENST00000542541 MAGI2Q86UL8 1455 aa34.88■■■■□ 3.17
HOMER3-205ENST00000542541 ZMYM4Q5VZL5 1548 aa34.88■■■■□ 3.17
HOMER3-205ENST00000542541 CROCC2H7BZ55 1655 aa34.86■■■■□ 3.17
HOMER3-205ENST00000542541 MAST1Q9Y2H9 1570 aa34.86■■■■□ 3.17
HOMER3-205ENST00000542541 ANKRD30AQ9BXX3 1397 aa34.84■■■■□ 3.17
HOMER3-205ENST00000542541 HECW2Q9P2P5 1572 aa34.84■■■■□ 3.17
HOMER3-205ENST00000542541 ATP7AQ04656 1500 aa34.83■■■■□ 3.17
HOMER3-205ENST00000542541 ROCK1Q13464 1354 aa34.82■■■■□ 3.16
HOMER3-205ENST00000542541 ZFYVE16Q7Z3T8 1539 aa34.81■■■■□ 3.16
HOMER3-205ENST00000542541 INO80Q9ULG1 1556 aaPredicted RBP34.8■■■■□ 3.16
HOMER3-205ENST00000542541 ADGRL2O95490 1459 aa34.79■■■■□ 3.16
HOMER3-205ENST00000542541 NCOA1Q15788 1441 aa34.79■■■■□ 3.16
HOMER3-205ENST00000542541 RRP7BPQ9NSQ0 103 aa34.76■■■■□ 3.15
HOMER3-205ENST00000542541 KIDINS220Q9ULH0 1771 aa34.76■■■■□ 3.15
HOMER3-205ENST00000542541 YEATS2Q9ULM3 1422 aa34.74■■■■□ 3.15
HOMER3-205ENST00000542541 KIF15Q9NS87 1388 aa34.72■■■■□ 3.15
HOMER3-205ENST00000542541 ADGBQ8N7X0 1667 aa34.72■■■■□ 3.15
HOMER3-205ENST00000542541 ARHGEF40Q8TER5 1519 aa34.72■■■■□ 3.15
HOMER3-205ENST00000542541 PLXNC1O60486 1568 aa34.71■■■■□ 3.15
HOMER3-205ENST00000542541 ATP10AO60312 1499 aa34.68■■■■□ 3.14
HOMER3-205ENST00000542541 PCGF6Q9BYE7 350 aa34.66■■■■□ 3.14
HOMER3-205ENST00000542541 DIP2CQ9Y2E4 1556 aa34.65■■■■□ 3.14
HOMER3-205ENST00000542541 ABCA6Q8N139 1617 aa34.65■■■■□ 3.14
HOMER3-205ENST00000542541 DHX29Q7Z478 1369 aaKnown RBP34.65■■■■□ 3.14
HOMER3-205ENST00000542541 HFM1A2PYH4 1435 aa34.64■■■■□ 3.14
HOMER3-205ENST00000542541 A2MP01023 1474 aa34.63■■■■□ 3.13
HOMER3-205ENST00000542541 DUOX2Q9NRD8 1548 aa34.63■■■■□ 3.13
HOMER3-205ENST00000542541 SIGLEC1Q9BZZ2 1709 aa34.61■■■■□ 3.13
HOMER3-205ENST00000542541 NAIPQ13075 1403 aa34.6■■■■□ 3.13
HOMER3-205ENST00000542541 ANKRD50Q9ULJ7 1429 aa34.58■■■■□ 3.13
HOMER3-205ENST00000542541 ERBINQ96RT1 1412 aa34.56■■■■□ 3.12
HOMER3-205ENST00000542541 REREQ9P2R6 1566 aa34.55■■■■□ 3.12
HOMER3-205ENST00000542541 SETD5Q9C0A6 1442 aa34.55■■■■□ 3.12
HOMER3-205ENST00000542541 KIF3BO15066 747 aa34.49■■■■□ 3.11
HOMER3-205ENST00000542541 GCC2Q8IWJ2 1684 aa34.49■■■■□ 3.11
HOMER3-205ENST00000542541 ARID4BQ4LE39 1312 aaPredicted RBP34.47■■■■□ 3.11
HOMER3-205ENST00000542541 AGLP35573 1532 aa34.47■■■■□ 3.11
HOMER3-205ENST00000542541 ACIN1Q9UKV3 1341 aaKnown RBP34.46■■■■□ 3.11
HOMER3-205ENST00000542541 EIF2AK4Q9P2K8 1649 aaKnown RBP34.43■■■■□ 3.1
HOMER3-205ENST00000542541 HRCP23327 699 aa34.43■■■■□ 3.1
HOMER3-205ENST00000542541 RAB3GAP2Q9H2M9 1393 aa34.41■■■■□ 3.1
HOMER3-205ENST00000542541 GGT6Q6P531 493 aa34.37■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms