RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 CTTNBP2Q8WZ74 1663 aa15.39■□□□□ 0.05
LMO3-224ENST00000540848 TARBP1Q13395 1621 aaKnown RBP15.38■□□□□ 0.05
LMO3-224ENST00000540848 GAPVD1Q14C86 1478 aa15.38■□□□□ 0.05
LMO3-224ENST00000540848 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
LMO3-224ENST00000540848 RANGAP1P46060 587 aaPredicted RBP15.34■□□□□ 0.05
LMO3-224ENST00000540848 PCDHB13Q9Y5F0 798 aa15.34■□□□□ 0.05
LMO3-224ENST00000540848 IFNL1Q8IU54 200 aa15.32■□□□□ 0.04
LMO3-224ENST00000540848 SGIP1Q9BQI5 828 aa15.32■□□□□ 0.04
LMO3-224ENST00000540848 METRNQ9UJH8 293 aa15.32■□□□□ 0.04
LMO3-224ENST00000540848 TIE1P35590 1138 aa15.32■□□□□ 0.04
LMO3-224ENST00000540848 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
LMO3-224ENST00000540848 CCER1Q8TC90 406 aaPredicted RBP15.32■□□□□ 0.04
LMO3-224ENST00000540848 TTBK1Q5TCY1 1321 aaPredicted RBP15.31■□□□□ 0.04
LMO3-224ENST00000540848 WDR62O43379 1518 aa15.31■□□□□ 0.04
LMO3-224ENST00000540848 DCAF8Q5TAQ9 597 aa15.31■□□□□ 0.04
LMO3-224ENST00000540848 AQRO60306 1485 aaKnown RBP eCLIP15.3■□□□□ 0.04
LMO3-224ENST00000540848 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
LMO3-224ENST00000540848 SLC39A7Q92504 469 aa15.29■□□□□ 0.04
LMO3-224ENST00000540848 TIAM1Q13009 1591 aa15.29■□□□□ 0.04
LMO3-224ENST00000540848 TTLL13PA6NNM8 815 aa15.28■□□□□ 0.04
LMO3-224ENST00000540848 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
LMO3-224ENST00000540848 IFT140Q96RY7 1462 aa15.28■□□□□ 0.04
LMO3-224ENST00000540848 PBRM1Q86U86 1689 aa15.28■□□□□ 0.04
LMO3-224ENST00000540848 C7P10643 843 aa15.28■□□□□ 0.04
LMO3-224ENST00000540848 FYCO1Q9BQS8 1478 aa15.27■□□□□ 0.03
LMO3-224ENST00000540848 RRBP1Q9P2E9 1410 aaKnown RBP15.27■□□□□ 0.03
LMO3-224ENST00000540848 PYGBP11216 843 aa15.27■□□□□ 0.03
LMO3-224ENST00000540848 OTUD5Q96G74 571 aa15.27■□□□□ 0.03
LMO3-224ENST00000540848 POTEJP0CG39 1038 aa15.26■□□□□ 0.03
LMO3-224ENST00000540848 CFAP43Q8NDM7 1665 aa15.26■□□□□ 0.03
LMO3-224ENST00000540848 POTEFA5A3E0 1075 aa15.25■□□□□ 0.03
LMO3-224ENST00000540848 FMN1Q68DA7 1419 aa15.25■□□□□ 0.03
LMO3-224ENST00000540848 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
LMO3-224ENST00000540848 GRIN2BQ13224 1484 aa15.23■□□□□ 0.03
LMO3-224ENST00000540848 CASKIN1Q8WXD9 1431 aa15.23■□□□□ 0.03
LMO3-224ENST00000540848 ADAMTS12P58397 1594 aa15.22■□□□□ 0.03
LMO3-224ENST00000540848 PCF11O94913 1555 aaKnown RBP15.22■□□□□ 0.03
LMO3-224ENST00000540848 LRRC9Q6ZRR7 1453 aa15.21■□□□□ 0.02
LMO3-224ENST00000540848 KANK4Q5T7N3 995 aaPredicted RBP15.2■□□□□ 0.02
LMO3-224ENST00000540848 THOC2Q8NI27 1593 aaKnown RBP15.2■□□□□ 0.02
LMO3-224ENST00000540848 FHOD3Q2V2M9 1422 aa15.17■□□□□ 0.02
LMO3-224ENST00000540848 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
LMO3-224ENST00000540848 CCNB3Q8WWL7 1395 aa15.17■□□□□ 0.02
LMO3-224ENST00000540848 PCDHB8Q9UN66 801 aa15.16■□□□□ 0.02
LMO3-224ENST00000540848 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
LMO3-224ENST00000540848 CLSPNQ9HAW4 1339 aa15.15■□□□□ 0.02
LMO3-224ENST00000540848 GSE1Q14687 1217 aa15.15■□□□□ 0.02
LMO3-224ENST00000540848 COLQQ9Y215 455 aaPredicted RBP15.15■□□□□ 0.02
LMO3-224ENST00000540848 IQGAP2Q13576 1575 aa15.14■□□□□ 0.01
LMO3-224ENST00000540848 TMEM106CQ9BVX2 250 aa15.14■□□□□ 0.01
LMO3-224ENST00000540848 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
LMO3-224ENST00000540848 SPOCK2Q92563 424 aa15.13■□□□□ 0.01
LMO3-224ENST00000540848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.1■□□□□ 0.01
LMO3-224ENST00000540848 MAGI1Q96QZ7 1491 aaPredicted RBP15.09■□□□□ 0.01
LMO3-224ENST00000540848 UGGT2Q9NYU1 1516 aa15.09■□□□□ 0.01
LMO3-224ENST00000540848 EIF4G3O43432 1585 aaKnown RBP15.09■□□□□ 0.01
LMO3-224ENST00000540848 CHRM1P11229 460 aaPredicted RBP15.07■□□□□ 0
LMO3-224ENST00000540848 PLSCR2Q9NRY7 297 aa15.07■□□□□ 0
LMO3-224ENST00000540848 CCDC18Q5T9S5 1454 aa15.07■□□□□ 0
LMO3-224ENST00000540848 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
LMO3-224ENST00000540848 P3H3Q8IVL6 736 aa15.07■□□□□ 0
LMO3-224ENST00000540848 KIAA0586Q9BVV6 1533 aa15.06■□□□□ 0
LMO3-224ENST00000540848 IER5LQ5T953 404 aa15.05■□□□□ -0
LMO3-224ENST00000540848 HECW1Q76N89 1606 aa15.04■□□□□ -0
LMO3-224ENST00000540848 GRIN2AQ12879 1464 aa15.04■□□□□ -0
LMO3-224ENST00000540848 EHBP1L1Q8N3D4 1523 aa15.03■□□□□ -0
LMO3-224ENST00000540848 PHLDB1Q86UU1 1377 aa15.03■□□□□ -0
LMO3-224ENST00000540848 SYNJ2O15056 1496 aa15□□□□□ -0.01
LMO3-224ENST00000540848 CIZ1Q9ULV3 898 aaPredicted RBP15□□□□□ -0.01
LMO3-224ENST00000540848 MTUS2Q5JR59 1369 aa15□□□□□ -0.01
LMO3-224ENST00000540848 SUPT6HQ7KZ85 1726 aaKnown RBP14.99□□□□□ -0.01
LMO3-224ENST00000540848 SEC24BO95487 1268 aa14.99□□□□□ -0.01
LMO3-224ENST00000540848 ATP1B4Q9UN42 357 aaPredicted RBP14.98□□□□□ -0.01
LMO3-224ENST00000540848 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
LMO3-224ENST00000540848 LRRIQ1Q96JM4 1722 aa14.98□□□□□ -0.01
LMO3-224ENST00000540848 ZNF467Q7Z7K2 595 aaPredicted RBP14.98□□□□□ -0.01
LMO3-224ENST00000540848 IRX5P78411 483 aaPredicted RBP14.97□□□□□ -0.01
LMO3-224ENST00000540848 KIAA0556O60303 1618 aa14.96□□□□□ -0.01
LMO3-224ENST00000540848 FGD6Q6ZV73 1430 aa14.96□□□□□ -0.02
LMO3-224ENST00000540848 MAMSTRQ6ZN01 415 aa14.95□□□□□ -0.02
LMO3-224ENST00000540848 ARHGEF11O15085 1522 aa14.94□□□□□ -0.02
LMO3-224ENST00000540848 SETD5Q9C0A6 1442 aa14.94□□□□□ -0.02
LMO3-224ENST00000540848 NCOA2Q15596 1464 aa14.93□□□□□ -0.02
LMO3-224ENST00000540848 MYOM3Q5VTT5 1437 aa14.93□□□□□ -0.02
LMO3-224ENST00000540848 EPRSP07814 1512 aaKnown RBP14.92□□□□□ -0.02
LMO3-224ENST00000540848 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
LMO3-224ENST00000540848 NUP160Q12769 1436 aa14.92□□□□□ -0.02
LMO3-224ENST00000540848 SCUBE2Q9NQ36 999 aa14.9□□□□□ -0.02
LMO3-224ENST00000540848 RAB3GAP2Q9H2M9 1393 aa14.9□□□□□ -0.02
LMO3-224ENST00000540848 CEP170Q5SW79 1584 aa14.9□□□□□ -0.02
LMO3-224ENST00000540848 PSEN1P49768 467 aa14.9□□□□□ -0.02
LMO3-224ENST00000540848 FAM50AQ14320 339 aaKnown RBP14.9□□□□□ -0.02
LMO3-224ENST00000540848 CHMP7Q8WUX9 453 aaPredicted RBP14.9□□□□□ -0.02
LMO3-224ENST00000540848 CARMIL2Q6F5E8 1435 aa14.88□□□□□ -0.03
LMO3-224ENST00000540848 PLCG2P16885 1265 aa14.87□□□□□ -0.03
LMO3-224ENST00000540848 RAPGEF6Q8TEU7 1601 aa14.87□□□□□ -0.03
LMO3-224ENST00000540848 ZNF316A6NFI3 1004 aaPredicted RBP14.86□□□□□ -0.03
LMO3-224ENST00000540848 TCOF1Q13428 1488 aaKnown RBP14.86□□□□□ -0.03
LMO3-224ENST00000540848 MIA2Q96PC5 1412 aa14.86□□□□□ -0.03
LMO3-224ENST00000540848 OCEL1Q9H607 264 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms